Sus scrofa (pig): 431672
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Entry
431672 CDS
T01009
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
431672 (DDX4)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
431672 (DDX4)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
431672 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
431672
NCBI-ProteinID:
NP_001278611
Ensembl:
ENSSSCG00000022021
UniProt:
A0A5K1UMM8
A0A4X1SLB0
LinkDB
All DBs
Position
16:34879701..34983701
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AA seq
729 aa
AA seq
DB search
MGDEDWEAEIIKPHMSSYVPVFEKDRYSSGANGDTYNRTPASSSEMDDGSSRRDHFMRSG
FASGRSLGNRDPGESNKRENTSTMGGFGVGKSFGNRGFSNNKFEEGDSSGFWRESNNDCE
DNQTRNRGFSKRGGFQDGNDSEASVSSRRGGRGSFRGCRGRFGLGSPNSEYEQDEGTHRT
GGFFGSRRSALSGAGNGDTYQSRSGSGSGRGGYKGLNEEVITGSGKNSWKSEAEGGESGD
IQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHEAPPAILTFEEANLCQT
LNSNIAKAGYTKLTPVQKYSIPIILGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITAS
RFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNI
LCATPGRLMDIIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTL
MFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRNI
GDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATS
VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDPESDSHLAQPLVK
VLSDAQQDVPAWLEEIAFSTYVPGFSGSSRGNVFASVDTRKNYQGKSSLNTAGFSSSQAP
NPVDDESWD
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagattgggaagcagaaataatcaaacctcatatgtcttcctatgttccc
gtatttgagaaggataggtattcttctggagcaaatggagacacttataataggactcca
gcttcatcatcagaaatggatgatggatcttctcgaagagatcacttcatgagaagtggc
tttgcctctgggaggagtttgggaaaccgggatcctggcgaatctaataaaagagagaat
acatccacaatgggtggttttggtgttggaaagagttttggaaacagaggtttttcaaat
aacaagtttgaagaaggtgatagctctggtttctggagagagtctaataatgactgtgaa
gataatcagacacggaacagaggtttttccaagagaggcggctttcaagatggaaatgat
tcagaagcctcagtgtcgtccagaagaggtggaagaggtagtttccgaggttgccgtgga
cgatttggtctaggaagtccaaatagcgaatatgaacaagatgaggggacccatcgtact
ggtggcttttttggttctagaagatcagcattaagtggtgcaggtaatggtgacacttac
caaagcagaagtggtagtggaagtggacgaggtggttacaaaggtctaaatgaagaagta
attacaggctctggaaagaattcttggaagtcagaagctgaaggaggagaaagtggtgac
attcaaggaccaaaagtaacctacataccacctcctccccctgaggatgaggactccatc
tttgcacattatcagacaggcataaactttgacaaatatgatactattcttgtagaagta
tctggacatgaggcaccgccagcaattctgacttttgaagaagctaatctctgtcagaca
ctgaatagcaacattgctaaagctggttatactaagcttactcctgtacagaagtacagt
attcctattatactaggaggacgagatttgatggcttgcgctcagacagggtctggaaag
actgcagcctttctcttgccaattttggctcatatgatgcgtgatggaataactgccagt
cgttttaaagagctgcaggaaccagagtgtattattgtagcaccaactcgagaattgatc
aatcagatctatttggaagccagaaaattttcttttgggacttgtgtaagagctgttgtt
atatatgggggaacccagttggggcattcaattcgacaaatagtacaaggctgtaatata
ttatgtgctactcctgggagactgatggatatcataggtaaagaaaagattggtctcaga
caagtcaaatatttagttttggatgaagctgatcgcatgctggatatgggttttggacca
gaaatgaagaagttaatttcctgcccaggaatgccatcaaaggaacaacgtcaaacactt
atgtttagtgcaacttttccagaagaaattcaaaggttggctggggagtttttaaaatcg
aattatttgtttgttgctgttggacaagtgggcggagcatgtagagatgttcagcagacc
attctccaagttggccagtactcaaaaagagaaaaacttgttgaaattctacgaaacata
ggtgatgaaagaactatggtctttgtagaaactaagaaaaaagcagattttattgccact
tttctttgtcaagaaaaaatatcaacaaccagtattcatggtgatcgagaacagagagag
agagagcaagctcttggagattttcgctgtgggaagtgtccagttcttgttgctacttca
gtagctgcccgagggctggatattgaaaatgttcagcatgttatcaattttgatcttcct
tccaccatcgatgaatatgttcatcgaattgggcgtacgggtcgctgtggaaatactggc
agagctatttccttttttgatcctgaatcagatagccatttagcacagccactagtgaaa
gtactatcagatgctcaacaggatgttcctgcgtggttagaagaaattgcatttagtacc
tatgttcctggcttcagtggtagttcaagaggaaatgtgtttgcatcagttgatactaga
aagaattaccagggcaagagctctttgaacacagcagggttttcttcttcacaagctccc
aatccagtagatgatgagtcatgggattaa
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