Sus scrofa (pig): 492279
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Entry
492279 CDS
T01009
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03018
RNA degradation
ssc04940
Type I diabetes mellitus
ssc05134
Legionellosis
ssc05152
Tuberculosis
ssc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
492279 (HSPD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
492279 (HSPD1)
05152 Tuberculosis
492279 (HSPD1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
492279 (HSPD1)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
492279 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
492279 (HSPD1)
03110 Chaperones and folding catalysts [BR:
ssc03110
]
492279 (HSPD1)
03029 Mitochondrial biogenesis [BR:
ssc03029
]
492279 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
492279 (HSPD1)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
492279 (HSPD1)
Messenger RNA biogenesis [BR:
ssc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
492279 (HSPD1)
Chaperones and folding catalysts [BR:
ssc03110
]
Heat shock proteins
HSP60 / Chaperonin
492279 (HSPD1)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
492279 (HSPD1)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
492279 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
492279 (HSPD1)
Exosomal proteins of breast cancer cells
492279 (HSPD1)
Exosomal proteins of colorectal cancer cells
492279 (HSPD1)
Exosomal proteins of bladder cancer cells
492279 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
492279
NCBI-ProteinID:
NP_001241645
Ensembl:
ENSSSCG00000016077
UniProt:
G9F6X6
LinkDB
All DBs
Position
15:complement(101360355..101373498)
Genome browser
AA seq
573 aa
AA seq
DB search
MLRLPAVLRQIRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
CSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDK
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKLYRGYISPYFINTSKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLLKG
KGDKAQIEKRIQEIIEQLDVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALESITPANEDQKIGLEIIKKALKIPAMTIA
KNAGVEGSLIVEKILQSSPEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLT
TAEVVVTEIPKEEKDPGMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgattacccgcagtccttcgtcagattaggccggtgtccagggcactggctcct
catctcactcgggcttatgccaaagatgtaaaatttggtgcagatgctcgagccttaatg
cttcaaggtgtagatcttttagcggatgctgtagccgttactatggggccaaagggaagg
acggtgataattgaacagagttggggcagtcccaaagtgacaaaagatggtgtgactgtt
gcaaagtccattgacttaaaagataaatataaaaatattggcgctaaacttgtgcaagat
gttgccaataacacaaacgaagaggctggggatggcaccactactgctactgtattggca
tgctctattgccaaggaaggcttcgagaagattagcaaaggtgctaatccagtggaaatc
aggagaggtgtgatgttagctgttgatgctgtaattgctgaacttaagaagcagtctaaa
cctgtgacaacccctgaagagattgcccaggttgctacaatttctgcaaatggagacaaa
gaaattggcaacatcatttctgatgcaatgaagaaggttggaagaaagggcgttataaca
gtaaaggacggaaaaacactgaatgatgaattagagattatagaaggcatgaagttgtat
agaggttatatttctccatactttattaatacatcaaaaggtcagaaatgtgaattccaa
gatgcctatgttttattgagtgaaaagaaaatttctagtgtccagtccattgttcctgct
cttgaaattgccaatgctcaccgtaagcccttggtcataattgctgaagatgttgatgga
gaagctttaagtacacttgttttgaataggttgaaagttggtcttcaggttgtagcagtc
aaagctccaggttttggtgacaatagaaagaaccaacttaaagacatggccattgctact
ggtggtgcagtatttggagaagaaggactgaccctaaatcttgaagatgttcagcctcat
gacttagggaaagttggagaggtcattgtgaccaaagatgatgccatgctcttgaaagga
aaaggtgacaaggctcaaattgaaaagcgtattcaagaaatcattgagcagttagatgtc
acaactagtgaatatgaaaaggaaaaactgaatgaacgtctggcaaaactctcagatggt
gtagctgtgctgaaggttggtgggactagtgatgttgaagtgaatgaaaagaaagacaga
gttacagatgccctgaatgcgacaagagctgctgttgaagaaggcatcgttctgggaggg
ggctgtgccttgcttcggtgcattccagccttggagtcaataactccagctaatgaagat
caaaaaattggcttagaaattattaaaaaagcactcaaaattcctgcaatgaccattgct
aagaatgcaggtgttgaaggatcattgatagttgagaaaattttgcagagttctccagaa
gttggttatgatgctatgcttggagattttgtgaacatggtggaaaaaggcatcattgat
ccaactaaggttgtaagaactgcattactggatgctgccggagtggcctctcttttaact
acagcagaagttgtagtcacagaaattcctaaagaagagaaggatcctggaatgggtgga
atgggaggaatgggaggtggtatgggaggtggcatgttctaa
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