Sus scrofa (pig): 641309
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Entry
641309 CDS
T01009
Symbol
PKD2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
641309 (PKD2)
04040 Ion channels [BR:
ssc04040
]
641309 (PKD2)
Cilium and associated proteins [BR:
ssc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
641309 (PKD2)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
641309 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
SU10_portal
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
641309
NCBI-ProteinID:
NP_001232908
Ensembl:
ENSSSCG00000009217
UniProt:
A0A4X1U842
F2VYA1
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All DBs
Position
8:complement(131002973..131058932)
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AA seq
970 aa
AA seq
DB search
MVNSSRVQPQQPGDAQRPAAPRTAGPGRLMAGGGAAGAGLAAPGGLREQRGLEIEMERIR
QAAARDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEEEEEDEVEGEEGGMVVEMDVEW
RPGSRRSAASSAVSSAGARGRGLGSFHGAGHPSGRRRRREDQGPPSPSPAGGGDPLHRHL
PLDGQPPRVAWAERLVRGLRGLWGTRLMEESSTDRERYLKSVLRELATYLLFLIVLCVLT
YGMMSSSVYYYTRIMSQLFLDTPVSRTEKTNFKTLSSVEDFWKFAEGALLDGLYWKTQPS
NGTEAHNRSFIYYENLLLGVPRIRQLRVRNGSCSIPQDLRDEIKECYDVYSVSSEDRAPF
GPRNGTAWIYTSEKDLNGSSHWGMLTTYSGAGYYLDLSRTREETAAQLAHLRKHAWLDRG
TRATFIDFSVYNANINLFCVIRLLVEFPATGGVIPSWQFQPVKLIQYVTTFDFFLAACEI
IFCFFILYYVVEEILEIRIHKLHYFRSFWNCLDVVIIVLSVAAIGINIHRTSNVEMLLQF
LEDQNTYPNFENLAYWQIQFNNIAAVIVFFVWIKLFKFISFNRTMSQLSTTMSRCAKDLF
GFAIMFFIIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDINFAEIEEANRVLGP
IYFTTFVFFTFFILLNMFLAIINDTYSEVKSDLAQQKAEMELSDLIRKGYHKALVKLKLK
KNTVDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEREHQQM
RDDLEKEREDLDLEHSSLPRPMSSRSFPRSLDDSEEDDDDDSGHSSRRRGSISSGVSYEE
FQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERNKLKRREVLGRLLDGVAEDERLGRDS
EIHREQMERLVREELERWESDDAASQISHGLGTPVGLNGQPRPRSSRPSSSQSTEGMEGG
GGNGSADIHV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactcgagccgcgtgcagccgcagcagcccggggacgcccagcggccggcggcg
ccccgaacggcgggccccgggcggctgatggcgggcggcggggccgcgggcgctggcctc
gcggccccgggcggcctccgcgagcaaaggggcctggagatcgagatggagcgcatccgg
caggcggccgcgcgggaccctccggccggagcctcggcctctccctctcctccgctctcg
tcgtgctcgcggcaggcgtggagccgcgacaaccccggcttcgaggccgaggaggaggag
gaggaagacgaggtggagggagaagaagggggcatggtagtggagatggacgtggagtgg
cgcccgggcagccggaggtccgcagcctcttcggccgtgagctccgcgggcgcccggggc
cgggggctggggagcttccacggcgccggccatccgagcgggaggcggcgccggcgagag
gaccagggcccgccgagccccagcccggccggcggcggggacccgctgcaccgccacctc
cccctggatgggcaaccgccccgagtggcctgggccgagaggctggttcgcgggctgcga
ggtctctggggaacaagactcatggaggaaagcagcaccgaccgtgagagataccttaaa
agtgttttacgggaactggccacgtacctccttttcctcatcgtcttgtgtgtcttgacc
tacgggatgatgagctccagtgtgtactactacacccggatcatgtcgcagctcttcctg
gacacccccgtgtccagaacggagaaaaccaactttaaaacgctttcttcagtggaagac
ttctggaagttcgcagaaggcgccttgttggacgggctctactggaagacacagcccagc
aacggaacggaagcccataaccgaagcttcatctactacgagaaccttctgttaggggtt
cctcgtatacggcagctgagagtcagaaatggatcctgttccatcccccaggacttgaga
gatgagattaaagagtgctacgacgtctactccgtcagcagtgaggacagggctccattt
ggtccaagaaatggaaccgcttggatctacacaagcgaaaaagacttgaatgggagtagc
cactggggaatgctcacgacgtacagcggagctggctattacctggatttgtcgagaaca
agagaggaaacggccgctcagctggctcacctcaggaaacacgcctggctggaccgagga
acccgtgcaacgtttattgacttttccgtgtacaacgccaacatcaacctgttctgtgtg
atcaggttattggtcgagttcccagccacaggcggagtgattccatcttggcaatttcag
cctgtaaagctgatccagtatgtcacaactttcgacttcttcctggcagcctgcgagatt
atcttttgcttctttatcctttactatgtggtggaagagatactggaaatccgcattcac
aagctgcactatttcaggagtttctggaattgcctggatgttgtgatcattgtgctatca
gtggccgctataggaattaacatccacagaacatcaaatgtggagatgctgctacagttt
ctcgaagatcaaaatacttaccccaactttgagaatctggcatactggcaaatccagttc
aacaacatagctgctgtcatagtattttttgtctggattaagctcttcaaattcatcagc
tttaacaggaccatgagtcagctctccacaaccatgtctcggtgtgccaaagacctcttt
ggctttgcaattatgttcttcattattttcttagcatatgcccagttggcataccttgtc
tttggcactcaggttgatgacttcagcaccttccaagagtgtatcttcactcaattccgt
atcattttgggtgatatcaacttcgcagagattgaggaagctaatcgcgttttgggacca
atttatttcactacatttgtgttctttacgttcttcattctcttgaatatgtttttggcc
atcatcaatgatacttactctgaagttaaatctgatttggcccagcagaaagctgaaatg
gaactctcagatcttatcagaaagggctaccataaagccttggtcaagctaaaactgaaa
aaaaacaccgtggatgacatttcagagagtctgcgtcaagggggcggcaagttaaatttc
gatgagcttcgacaagatctcaaagggaagggccatacggatgccgagattgaggcaata
ttcacaaagtatgaccaagacggagaccaagaactgactgaacgtgagcatcagcagatg
cgagacgacttggaaaaagagagggaggacctggacttggagcacagctctttaccacgt
cccatgagcagccgaagcttcccccgcagcctggacgactctgaggaggacgatgacgac
gacagcggtcacagctccaggaggagggggagcatctccagcggggtttcttacgaagag
tttcaagtcctggtgagacgggtggaccggatggagcactccattggcagcatcgtgtcc
aagattgatgcagtgatagtgaagctggagatcatggagcggaacaaactgaagagaaga
gaggtgctggggaggctgctggacggcgtggccgaggatgaaaggctgggtcgtgacagt
gaaatccacagggaacagatggaacggctggtacgagaagagttggagcgctgggaatcc
gatgatgcggcttcccaaataagtcatggtttgggcacacccgtgggactcaatggtcag
cctcgccccagaagctcccgcccttcttcctcccagtctacagaaggaatggaaggtgga
ggtggaaatggcagtgccgatatccacgtgtag
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integrated database retrieval system
