KEGG   Sus scrofa (pig): 733594
Entry
733594            CDS       T01009                                 
Symbol
TUBA1B
Name
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04145  Phagosome
ssc04210  Apoptosis
ssc04517  IgSF CAM signaling
ssc04530  Tight junction
ssc04540  Gap junction
ssc04814  Motor proteins
ssc05010  Alzheimer disease
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    733594 (TUBA1B)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    733594 (TUBA1B)
  09143 Cell growth and death
   04210 Apoptosis
    733594 (TUBA1B)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    733594 (TUBA1B)
   04540 Gap junction
    733594 (TUBA1B)
  09142 Cell motility
   04814 Motor proteins
    733594 (TUBA1B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    733594 (TUBA1B)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    733594 (TUBA1B)
   05012 Parkinson disease
    733594 (TUBA1B)
   05014 Amyotrophic lateral sclerosis
    733594 (TUBA1B)
   05016 Huntington disease
    733594 (TUBA1B)
   05020 Prion disease
    733594 (TUBA1B)
   05022 Pathways of neurodegeneration - multiple diseases
    733594 (TUBA1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    733594 (TUBA1B)
   03036 Chromosome and associated proteins [BR:ssc03036]
    733594 (TUBA1B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssc04812]
    733594 (TUBA1B)
   04147 Exosome [BR:ssc04147]
    733594 (TUBA1B)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     733594 (TUBA1B)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     733594 (TUBA1B)
Cytoskeleton proteins [BR:ssc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    733594 (TUBA1B)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   733594 (TUBA1B)
  Exosomal proteins of other body fluids (saliva and urine)
   733594 (TUBA1B)
  Exosomal proteins of colorectal cancer cells
   733594 (TUBA1B)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 733594
NCBI-ProteinID: NP_001038009
Ensembl: ENSSSCG00000000190
UniProt: Q2XVP4
Structure
LinkDB
Position
5:complement(15150229..15153620)
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaag
accattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaag
catgtgcccagggcagtgtttgtagacctggaacccacagtcattgatgaagttcgcact
ggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgaggtcactacaccattggcaaggagatcattgacctcgtcttggac
cgaattcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagc
tttggcgggggaacgggttctgggttcacctccctgctgatggaacgtctctctgtcgat
tatggcaagaagtccaagctggagttctccatttacccagccccccaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatattgaa
cgcccaacctacactaatctgaaccgccttattagccaaattgtgtcctccatcactgct
tccctgaggtttgatggggccctgaacgttgatctgacagaattccagaccaacctggtg
ccctacccccgcatccatttccctctggccacatacgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttctgtagcagagatcactaatgcttgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgt
ggtgacgtggttcccaaagacgtcaatgctgccattgccaccatcaagaccaagcgcagc
atccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagcccccc
actgtggtccctggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaac
accacagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgag
gcccgtgaggacatggctgcccttgagaaggattacgaggaggttggtgtggattctgtt
gaaggagagggagaggaagaaggcgaggaatactaa

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