Sus scrofa (pig): 733594
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Entry
733594 CDS
T01009
Symbol
TUBA1B
Name
(RefSeq) tubulin alpha-1B chain
KO
K07374
tubulin alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04145
Phagosome
ssc04210
Apoptosis
ssc04517
IgSF CAM signaling
ssc04530
Tight junction
ssc04540
Gap junction
ssc04814
Motor proteins
ssc05010
Alzheimer disease
ssc05012
Parkinson disease
ssc05014
Amyotrophic lateral sclerosis
ssc05016
Huntington disease
ssc05020
Prion disease
ssc05022
Pathways of neurodegeneration - multiple diseases
ssc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
733594 (TUBA1B)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
733594 (TUBA1B)
09143 Cell growth and death
04210 Apoptosis
733594 (TUBA1B)
09144 Cellular community - eukaryotes
04530 Tight junction
733594 (TUBA1B)
04540 Gap junction
733594 (TUBA1B)
09142 Cell motility
04814 Motor proteins
733594 (TUBA1B)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
733594 (TUBA1B)
09164 Neurodegenerative disease
05010 Alzheimer disease
733594 (TUBA1B)
05012 Parkinson disease
733594 (TUBA1B)
05014 Amyotrophic lateral sclerosis
733594 (TUBA1B)
05016 Huntington disease
733594 (TUBA1B)
05020 Prion disease
733594 (TUBA1B)
05022 Pathways of neurodegeneration - multiple diseases
733594 (TUBA1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
733594 (TUBA1B)
03036 Chromosome and associated proteins [BR:
ssc03036
]
733594 (TUBA1B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
733594 (TUBA1B)
04147 Exosome [BR:
ssc04147
]
733594 (TUBA1B)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
733594 (TUBA1B)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
733594 (TUBA1B)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
733594 (TUBA1B)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
733594 (TUBA1B)
Exosomal proteins of other body fluids (saliva and urine)
733594 (TUBA1B)
Exosomal proteins of colorectal cancer cells
733594 (TUBA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
733594
NCBI-ProteinID:
NP_001038009
Ensembl:
ENSSSCG00000000190
UniProt:
Q2XVP4
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:complement(15150229..15153620)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaag
accattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaag
catgtgcccagggcagtgtttgtagacctggaacccacagtcattgatgaagttcgcact
ggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgaggtcactacaccattggcaaggagatcattgacctcgtcttggac
cgaattcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagc
tttggcgggggaacgggttctgggttcacctccctgctgatggaacgtctctctgtcgat
tatggcaagaagtccaagctggagttctccatttacccagccccccaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatattgaa
cgcccaacctacactaatctgaaccgccttattagccaaattgtgtcctccatcactgct
tccctgaggtttgatggggccctgaacgttgatctgacagaattccagaccaacctggtg
ccctacccccgcatccatttccctctggccacatacgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttctgtagcagagatcactaatgcttgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgt
ggtgacgtggttcccaaagacgtcaatgctgccattgccaccatcaagaccaagcgcagc
atccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagcccccc
actgtggtccctggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaac
accacagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgag
gcccgtgaggacatggctgcccttgagaaggattacgaggaggttggtgtggattctgtt
gaaggagagggagaggaagaaggcgaggaatactaa
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