Sus scrofa (pig): 733650
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Entry
733650 CDS
T01009
Symbol
TAP2
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc02010
ABC transporters
ssc04145
Phagosome
ssc04612
Antigen processing and presentation
ssc05163
Human cytomegalovirus infection
ssc05168
Herpes simplex virus 1 infection
ssc05169
Epstein-Barr virus infection
ssc05170
Human immunodeficiency virus 1 infection
ssc05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
733650 (TAP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
733650 (TAP2)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
733650 (TAP2)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
733650 (TAP2)
05168 Herpes simplex virus 1 infection
733650 (TAP2)
05163 Human cytomegalovirus infection
733650 (TAP2)
05169 Epstein-Barr virus infection
733650 (TAP2)
09163 Immune disease
05340 Primary immunodeficiency
733650 (TAP2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
733650 (TAP2)
Enzymes [BR:
ssc01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
733650 (TAP2)
Transporters [BR:
ssc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
733650 (TAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_29
AAA_21
AAA_16
AAA_23
AAA_15
Zeta_toxin
SRP54
RNA_helicase
AAA_5
AAA_18
RsgA_GTPase
Thymidylate_kin
AAA_33
Motif
Other DBs
NCBI-GeneID:
733650
NCBI-ProteinID:
NP_001193370
Ensembl:
ENSSSCG00000025173
Vega:
OTTSUSG00000001383
UniProt:
A0A8D1TYN8
A5D9J7
LinkDB
All DBs
Position
7:complement(25045085..25056915)
Genome browser
AA seq
726 aa
AA seq
DB search
MRLPDLRPWAALLLADSALLWLLQGPLEALLPRGLPGLWLEGILRLGGLWWLLRLGGLLG
YVRTLLCPLCLVIPFFLSLRALVPGALSAPPARVASAPWSWLLLGSGAAGLSWAVWAVLS
PPGAQEKKEDQENNRALMWRLLKLSWPDWPFLAAAFFFLVLAVLGETLIPYYSGLVIDIL
GGDFDPDAFVSAILFMSLFSVGSSLSAGCRGSAFTLVMSRINLRVREQLFSSLLHQDLAF
FQETKTGELNSRLSSDTKLMSLWLPLNANVLLRSLVKVLGLFGFMLSLSPRLTLLSLLQM
PLTIAAEKVYNARHLAVLREIQDAVARAGQVVREAVGDLQTVRSFGAEEEEVCRYKEALE
RCRQLWWRRDLEQALYLLLRRMLNLAMKVLLLSCGLQQILAGDLTQGGLLSFLLYQENMG
SYVHTLVYVFGDMLSNVGAAEKVFYYLDRQPDLPPPGTLAPSTLKGVVKFQGVSFAYPNC
PDQPVLKGLTFTLHPGQMTALVGPNGSGKSTVAALLQNLYQPTEGQVLLDEEPVSAYEHH
YLHQQVVLVGQEPVLFSGSVRDNIAYGLKSCSDEKVMAAARAARAEEFINEMEHGLYTDV
GEKGNQLAVGQKQRLAIARALVRDPRVLILDEATSALDAESEQALQDWKSHGNRTVLVIA
HRLHTVQNADQILVLKQGELQEHAQLMEGEDLYSYLVRQNQRPEGGTPETLPSSQGHLSD
PEELLL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcggctccctgacctgagaccctgggccgccctgctgctggcggactcggccttactc
tggctgctccagggacctctggaggctctgcttcctcgagggcttccaggcctgtggctg
gagggcatcttgcgacttggagggctttggtggctgctgaggctgggagggctgctggga
tatgtgcggacactgctgtgccccctctgcctggtgatccccttctttctctccttgagg
gccctggtcccaggagccttgagtgctcccccagccagagtggcttcagccccttggagc
tggctgctgctggggtccggggctgcggggctcagctgggcagtgtgggcagtgctgagc
cctccaggagcccaggagaagaaggaggaccaggagaacaacagagctttgatgtggagg
ttgctgaagctctcctggccggactggcctttcctggctgctgccttcttctttcttgtc
cttgccgtgttgggtgagacactaatcccttactattctggcctcgtgattgacatcctg
gggggtgattttgaccctgatgcctttgtcagcgccatcttgttcatgagtcttttctcc
gttgggagctcactgtccgctggctgccggggaagcgccttcaccctcgtcatgtccagg
atcaacctgcgtgtccgggagcagcttttctcctccctcctgcaccaggacctggctttc
ttccaggagactaagacaggggagctgaattcacggctgagctcggacaccaaactgatg
agtctctggcttcctctgaatgccaacgtgctcttgcgcagcctggtcaaggtgctggga
ctcttcggcttcatgctcagcttgtcgcctcgactcaccctcctctctctgctccagatg
cctctcacgatagcggctgagaaggtgtacaatgcccgccatctggcagtgcttcgagag
atccaggatgcagtggcgagagcagggcaggtggtgcgggaggctgtgggagacctgcag
actgtgcgcagttttggggccgaggaggaagaagtctgtcgctataaggaggccctggaa
cgatgccggcagctgtggtggcgaagagacctggaacaggccctctacctgctcttaagg
aggatgctgaacttggcaatgaaggtgctgttgctgagctgtgggctgcagcagatcctg
gctggggacctcacccagggtgggctgctctcctttctgctctaccaggaaaacatgggc
tcctatgtgcacaccctggtatacgtgtttggggatatgctgagcaacgtgggggctgca
gagaaggttttctactacctggacagacagccagatctgcctccacctgggacattggcc
ccttccactctgaagggggtggtgaaattccaaggcgtctcctttgcatatcctaactgc
cctgaccagcctgtgctcaagggtctcacattcaccctacatcctggtcagatgaccgct
ctggtggggcccaatgggtctgggaagagcaccgtggctgccctgctgcagaacctgtac
cagcccaccgaggggcaggtgctgctggacgaggagcccgtctccgcctatgagcatcac
tacctgcaccaacaggtggttttggtcgggcaggagcctgtgctgttctcggggtctgtg
agggacaacattgcttatgggctgaagagctgcagcgatgagaaggtgatggccgctgcc
cgggctgccagggcagaggagttcataaacgaaatggagcacggactctacacagatgtg
ggggagaaagggaaccagctggctgtgggacagaagcagcgtctggccattgcccgggcc
ctcgtgcgggacccacgagtcctcatcctggacgaggccaccagtgccctggacgcggag
agcgagcaggcgctgcaggactggaaatcccacgggaaccggacggtgctggtgatcgcg
cacaggctgcatacggttcagaacgcggaccagatcctggtgctcaagcagggagagctg
caggagcatgcgcagctcatggagggggaggacctctactcgtacctggtgcggcagaac
cagaggccggaggggggcaccccagagacactgccctcttcccagggccatctcagtgac
ccagaggagctcctgctttga
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