KEGG   Sus scrofa (pig): 808503
Entry
808503            CDS       T01009                                 
Symbol
COX1
Name
(RefSeq) cytochrome c oxidase subunit I
  KO
K02256  cytochrome c oxidase subunit 1 [EC:7.1.1.9]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc00190  Oxidative phosphorylation
ssc01100  Metabolic pathways
ssc04260  Cardiac muscle contraction
ssc04714  Thermogenesis
ssc04932  Non-alcoholic fatty liver disease
ssc05010  Alzheimer disease
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05208  Chemical carcinogenesis - reactive oxygen species
ssc05415  Diabetic cardiomyopathy
Module
ssc_M00154  Cytochrome c oxidase
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    808503 (COX1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    808503 (COX1)
 09160 Human Diseases
  09161 Cancer: overview
   05208 Chemical carcinogenesis - reactive oxygen species
    808503 (COX1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    808503 (COX1)
   05012 Parkinson disease
    808503 (COX1)
   05014 Amyotrophic lateral sclerosis
    808503 (COX1)
   05016 Huntington disease
    808503 (COX1)
   05020 Prion disease
    808503 (COX1)
   05022 Pathways of neurodegeneration - multiple diseases
    808503 (COX1)
  09166 Cardiovascular disease
   05415 Diabetic cardiomyopathy
    808503 (COX1)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    808503 (COX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:ssc03029]
    808503 (COX1)
Enzymes [BR:ssc01000]
 7. Translocases
  7.1  Catalysing the translocation of protons
   7.1.1  Linked to oxidoreductase reactions
    7.1.1.9  cytochrome-c oxidase
     808503 (COX1)
Mitochondrial biogenesis [BR:ssc03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA-encoded proteins
   Cytochrome c oxidase
    808503 (COX1)
SSDB
Motif
Pfam: COX1
Other DBs
NCBI-GeneID: 808503
NCBI-ProteinID: NP_008636
UniProt: O79876 Q71KK5
Structure
LinkDB
Position
MT:6511..8055
AA seq 514 aa
MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTA
HAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEA
GAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQ
TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGH
PEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVD
TRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLAN
SSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQAWAKIHFVIMFVG
VNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFIIWEAFASKR
EVSAVELTSTNLEWLHGCPPPYHTFEEPTYINLK
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgttcgtaaatcgttgactatactcaacaaaccacaaagacatcggcaccctgtaccta
ctatttggtgcctgagcaggaatagtgggcactgccttgagcctactaattcgcgctgaa
ctaggtcagcccggaaccctacttggcgatgatcaaatctataatgtaattgttacagct
catgcctttgtaataatcttctttatagtaatacccattatgattgggggttttggtaac
tgactcgtaccgctaataatcggagctcccgatatggcctttccacgtataaacaacata
agtttctgactacttccaccatccttcctattacttctggcatcctcaatagtagaagcc
ggagcgggtactggatgaactgtatacccacctttagctggaaacttagcccatgcaggg
gcttcagttgatttaacaattttctccctacaccttgcaggtgtatcatcaatcctaggg
gctattaatttcattaccacaattattaacataaaaccccccgcaatgtctcaataccaa
acacccctgtttgtctgatcagtactaatcacagccgtactacttctactatccctgcca
gttctagcagctggcattactatactactgacagaccgcaacctgaacacaacctttttt
gatccagcaggtggtggagaccctatcctttatcaacacttgttctgatttttcggacac
ccagaagtatacattctcatcttaccaggattcggaataatctcccacattgtaacctac
tattcaggtaaaaaagaaccatttggatatataggcatagtatgagccataatgtccatt
ggattcttaggttttattgtatgggctcaccacatattcaccgtaggaatagacgtagat
acccgagcatactttacatctgctacaataatcattgctattcccactggagtaaaagta
tttagttgattagctaccctgcacggcggcaatattaaatgatcacccgcaatactatga
gctctgggcttcatcttcctattcaccgtaggaggtctaacgggcattgtactagctaat
tcctccctagacattgtattacatgatacatattatgtagtcgcacacttccactatgtc
ttatctataggagcagtgttcgccattatagggggctttgttcactgattccccctattc
tccgggtacacactcaaccaagcatgagcaaaaattcactttgtaatcatattcgtagga
gtaaatataacattctttccacaacactttctaggactatccggaatacctcgacgatac
tccgattatcctgacgcatacacagcatgaaatactatttcctcaataggctcattcatc
tcactaacagcagtgatattaataatcttcattatctgagaagcattcgcatcaaaacga
gaagtatctgcagtagaactgacaagcacaaacctagaatgactacacggatgtcctcct
ccctatcacacatttgaagaaccaacatatatcaacctaaaataa

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