Staphylococcus schleiferi 1360-13: LH95_03130
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Entry
LH95_03130 CDS
T04012
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ssch
Staphylococcus schleiferi 1360-13
Brite
KEGG Orthology (KO) [BR:
ssch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssch03016
]
LH95_03130
Enzymes [BR:
ssch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LH95_03130
Transfer RNA biogenesis [BR:
ssch03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LH95_03130
Prokaryotic type
LH95_03130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF5530
DUF8191
Ad_cyc_g-alpha
DUF5873
Motif
Other DBs
NCBI-ProteinID:
AKS66526
LinkDB
All DBs
Position
710697..711500
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AA seq
267 aa
AA seq
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MQRVLVKISYNGAQFLGFQIQNQGRTVQGYFEKILKRMHQKPVRIHPTSRTDRGVHAKEQ
YFHFDTDLNITPNKWQHAMNSALPDDIYVHEVSLIDSDFHCRYDCVGKRYRYAIYQDAHR
NPFLAHLKTLEAHALNIEAMQAAARHFIGTHDFTSFCSQKTEVESKTRTIYESRIEVTED
GLDFIITGSGFLYNMVRVIMAYLLEVGKGKRQGEDIPHILKMKDRTLVPHTAPAEGLYLE
KIYLSPEELKKDFGETINIHTKKSSQI
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgtgttagtgaaaatcagttataatggggcacaatttttaggctttcaaatt
caaaaccaaggtcgtacagtgcaaggctattttgaaaaaatattgaaacgcatgcatcaa
aagcctgttcgaattcaccctacaagtcgcacagatcgtggtgttcatgcaaaagaacag
tatttccatttcgatacggatttgaatattacgcctaataagtggcaacatgccatgaat
agtgcgttaccagatgatatttatgttcatgaagtctctttaatcgattcagattttcac
tgtcgttatgattgtgtaggtaaacgctatcgatacgctatttatcaagatgcacatcgc
aatccatttctcgcgcatttgaaaacgctcgaggcccatgcacttaatattgaagcgatg
caagcagctgcacgtcattttattggaacgcatgattttaccagtttctgttctcaaaag
actgaagttgaaagtaaaacacgtacgatttatgaaagtcgcattgaagtcactgaagat
ggcttagattttattattacagggtcaggttttttatataatatggtacgtgtcattatg
gcttacttacttgaagtcggaaaaggtaagcgacaaggtgaggatattccacatattctt
aaaatgaaagatcgaacgcttgtaccacatacagcaccggcagaaggcctctatttagaa
aagatatatttatcgcctgaagagcttaaaaaagacttcggtgaaacaattaatattcat
acgaaaaaatcgtcacaaatttaa
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