Staphylococcus schleiferi 1360-13: LH95_03960
Help
Entry
LH95_03960 CDS
T04012
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssch
Staphylococcus schleiferi 1360-13
Pathway
ssch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH95_03960 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssch03019
]
LH95_03960 (groEL)
03110 Chaperones and folding catalysts [BR:
ssch03110
]
LH95_03960 (groEL)
03029 Mitochondrial biogenesis [BR:
ssch03029
]
LH95_03960 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssch04147
]
LH95_03960 (groEL)
Enzymes [BR:
ssch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LH95_03960 (groEL)
Messenger RNA biogenesis [BR:
ssch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LH95_03960 (groEL)
Chaperones and folding catalysts [BR:
ssch03110
]
Heat shock proteins
HSP60 / Chaperonin
LH95_03960 (groEL)
Mitochondrial biogenesis [BR:
ssch03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LH95_03960 (groEL)
Exosome [BR:
ssch04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LH95_03960 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
LH95_03960 (groEL)
Exosomal proteins of breast cancer cells
LH95_03960 (groEL)
Exosomal proteins of colorectal cancer cells
LH95_03960 (groEL)
Exosomal proteins of bladder cancer cells
LH95_03960 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKS66666
LinkDB
All DBs
Position
874525..876144
Genome browser
AA seq
539 aa
AA seq
DB search
MAKELKFSEDARQAMLRGVDKLANAVKVTIGPKGRNVVLDKEFTAPLITNDGVTIAKEIE
LEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGIRQGID
KAVAVAIEALHNISQKVENKEEIAQVGAISAADEEVGRYISEAMEKVGNDGVISIEESSG
FNTELDVVEGMQFDRGYQSPYMVTDSDKMTAELEKPYILITDKKISSFQDILPLLEQIVQ
SNRPILIVADEVEGDALTNLVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVIT
DDLGLELKEATIDMLGTANKVEVTKDNTTVVDGDGDPTNIDARVNQIKAQIEETDSDFDR
EKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNI
FKNVEEIDAEGDEATGVNIVLKALQAPVRQIAENAGLEGSVIVERMKNAEPGVGYNAATD
EWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAVVANIPEEKGNDMPQMGGMPGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaattaaaattctctgaagatgcacgtcaagccatgttacgtggtgtagat
aaacttgcaaatgctgtaaaagtaacaatcggaccaaaaggacgtaatgtcgtattagac
aaagaatttacagcacctttaattactaacgatggggtaacaatcgcaaaagaaatcgaa
ttagaagatccatatgaaaacatgggtgcaaaattagtacaagaagttgcaaataaaacg
aatgaaatagctggtgatggtacaacaacagcgactgtattagcacaagctatgattcaa
gaaggacttaaaaatgtaacaagtggcgcaaacccagtaggtatccgtcaaggtattgat
aaagcggtagctgtagcgattgaagcacttcataatatttctcaaaaagtagaaaataaa
gaagaaatcgcgcaagtaggtgctatttctgcagcggatgaagaagtaggtcgttatatt
tctgaagctatggaaaaagtaggtaatgacggtgtaatctctattgaagaatcaagcggt
tttaatactgaattagatgtagtagaaggtatgcaattcgatcgtggataccaatctcca
tacatggtgactgattcagataaaatgactgcagagttagaaaaaccttatattttaatc
acggataaaaaaatctcatctttccaagatatcctacctttattagagcaaatcgttcaa
tctaatcgcccaattttaatcgttgctgatgaagttgaaggcgacgctttaacaaactta
gtattgaaccgtatgcgtggtacatttactgccgttgcagtaaaagcaccaggatttggt
gaccgtagaaaagcgatgttagaagatttagctattttaacaggtgctcaagtcatcact
gacgatcttggtttagaattaaaagaagctacaatcgatatgttaggtacagcaaacaaa
gttgaagtcactaaagacaacacaactgttgttgatggtgatggagacccaacaaatatc
gatgcacgtgtgaaccaaattaaagcacaaattgaagaaactgattctgattttgaccgt
gaaaaattacaagagcgccttgctaaattagcaggtggtgtcgctgtaattaaagttggt
gctgcatcagaaacagaattaaaagaacgtaaattacgtattgaagatgcattgaactca
acacgtgctgcggtagaagaaggtattgtagcaggtggtggtacagcattaatgaatatc
ttcaaaaatgttgaagaaattgatgcagaaggcgacgaagctacaggtgtcaacatcgta
ttaaaagctttacaagccccagtacgccaaattgcggaaaacgctggtttagaaggttct
gtcattgtagaaagaatgaaaaatgcagaaccaggtgtaggttataatgcagcaacagat
gaatgggtcaatatgttagaagcgggtatcgtggatcctacaaaagtgacacgttcagca
ttacaacatgctgcgagcgttgctgcaatgttccttactacagaagcggtagtcgcaaat
atacctgaagaaaaaggaaatgacatgccacaaatgggcggcatgccaggcatgatgtaa
DBGET
integrated database retrieval system
