Staphylococcus schleiferi 1360-13: LH95_05670
Help
Entry
LH95_05670 CDS
T04012
Name
(GenBank) RecD/TraA family helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ssch
Staphylococcus schleiferi 1360-13
Pathway
ssch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LH95_05670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssch03400
]
LH95_05670
Enzymes [BR:
ssch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LH95_05670
DNA repair and recombination proteins [BR:
ssch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH95_05670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
nSTAND3
Rad17
Mg_chelatase
AAA
AAA_14
AAA_22
UvrD-helicase
Zeta_toxin
HHH_5
TsaE
ABC_tran
T2SSE
AAA_28
NB-ARC
AAA_7
AAA_29
DUF6858
AAA_16
AAA_18
Pro-kuma_activ
NPHP3_N
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AKS66957
LinkDB
All DBs
Position
1207183..1209576
Genome browser
AA seq
797 aa
AA seq
DB search
MDNPTLFDQTYVKGTVEMILFQNNENYYTVLKVDVQESNGDFDDMVTVVGYFPNMVEDET
YLFKGSVVQHPKYGKQLKAETFQKEIPQTKDAVIAYLSSDLFKGIGKKTAELIVETIGEN
AINKILKDNQVIEKVPKLSKKKQEQIVQQIISNQESEQVMIRLNELGFGSKLAMDIYKFY
QHETLNVLDQNPYQLVYDIKGVGFQKADQLAQQLGIHPNHPDRLKAGLLFLVEETCIKQG
HTYLPQEALINETIQLLSKNEGEDVRYESIEDIMAQLTEEKKLIEVDHMIAIPSLYYSEI
KSTQNLFRVYSHNEALTQFERSDIQLHIGEIEEMNEVHYAASQKEALECAINHKVMLLTG
GPGTGKTTVIKGIVQLYSEIHGVSLDYDDYHNNDYPIVLAAPTGRASKRLHESTGLEAMT
IHRLIGWNQETKPDDILDNEINAKLIIIDEMSMVDTWLFHQFMAAVPLDAQIIFVGDEDQ
LPSVGPGQIFKDLIDSNVLPRINLTEVYRQQEGSSIIELAHKMKLGEPVDITQRFHDRSF
ISCSTEQIPDVVEKVVNNAVQKGYTMADIQVLAPMYRGNAGIKRLNQILQSILNPVHDKS
KREIEFGDVIYRKGDKVLQLINRPNDNIFNGDIGIIVGIFWAKENALNKDVVVVDYDGNE
ITYMKSDLTELTHAYCTSIHKAQGSEFPIVLMPIIKQYYRMLQKPILYTGLTRARQSLVF
LGDSEAFNMGLATEGKARLTQLYSFLTQYFNNETDENNQGDQDDLPIELTEATMFKINPM
INMGEVTPYDFLEIDKA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggataatccaacactgtttgatcaaacctatgtaaaaggaacagttgaaatgatattg
ttccaaaataacgaaaactactatacagtgctgaaagtcgatgtacaagaatcaaatggc
gacttcgatgacatggttacagtcgttggatattttcctaatatggtcgaagatgaaacg
tatctgtttaaaggaagcgttgtccaacatccaaagtatggtaaacagttaaaagccgaa
actttccagaaagaaattccccaaactaaagatgcagtaattgcatatttatcaagcgac
ttattcaaaggtattggtaaaaaaacagcagaactgattgtcgaaacaattggagaaaat
gcgattaataaaatattgaaagataatcaagtcattgaaaaggtgccaaaactttctaaa
aagaagcaagaacaaattgtgcagcaaattatctccaatcaagaaagtgaacaagtgatg
atacgcctcaatgaattaggatttggttcaaaattagcgatggatatttataaattttat
caacatgaaacgctcaatgtactagatcaaaacccctatcaattggtttacgatattaag
ggggttggttttcaaaaagcggaccaacttgcacaacagttaggtattcatccgaatcat
cctgatcgtctaaaagcaggactattattcttggttgaagaaacttgtattaaacaaggc
catacgtacttaccacaagaggcacttatcaatgagaccatacaacttctttctaaaaat
gagggtgaagacgttcgttatgaatccattgaagacatcatggcgcaattgaccgaagaa
aaaaagttaatagaagttgatcacatgattgccataccaagtctgtattattctgaaatt
aaaagtacacaaaatttattcagagtttatagtcataatgaagcactgacgcaatttgaa
cgttcggatattcaactgcatattggtgaaatagaagagatgaatgaagtccattacgct
gcctctcaaaaagaagcgttagaatgcgcaatcaatcataaagttatgttattaacaggc
ggtccaggaacagggaaaacaacggttattaaaggtattgttcaactttattcagagatt
catggtgtgtcccttgattatgatgattaccataataacgactatcctattgttttagca
gcgccaacaggtcgtgcgtcaaaacgattacatgaatcaacgggcttagaagccatgacg
atacatcgtttaataggatggaatcaagaaacgaagcctgatgatattttggataatgaa
attaatgccaaactgattattatagatgagatgtcaatggtggatacttggttattccat
caatttatggctgccgtgccgttagacgcacaaatcatttttgttggtgatgaagaccag
ttaccatccgttggtccggggcaaatttttaaagacctcatcgattcaaatgtgctacct
agaattaacttaactgaagtataccgacaacaagagggatcgagtattatagaacttgcc
cacaaaatgaaactaggtgagcctgttgatattacacagcgtttccatgaccgttctttt
atatcctgtagtaccgaacagatacctgatgtcgttgaaaaggttgtaaataatgcagtc
caaaaaggatatacgatggctgacattcaagttttagcacctatgtatagagggaacgct
ggtattaaaagattaaatcagatattacaatccattcttaatccagttcacgataagtct
aaacgagaaatcgaatttggcgatgtgatttatcgtaaaggtgataaagtactgcaactc
atcaatagaccgaacgacaatatttttaatggtgatattggtattattgtcggcatattt
tgggcgaaagaaaacgcccttaacaaagatgtcgttgtagtagattatgatggtaatgaa
atcacatatatgaaatctgatttaacggaactcacacatgcttattgtacctctattcat
aaagcgcaaggttcagaatttccaattgtgcttatgccgattatcaagcagtattatcga
atgcttcaaaagccgattctttatacggggctgacacgcgctagacaatctcttgtgttt
ttaggcgattcagaagccttcaatatggggctagctacagagggtaaggcacgtttaaca
caattatattcgtttttaacacaatattttaacaatgaaaccgatgaaaataatcaaggc
gatcaagatgacttaccaatagaattgaccgaagcaaccatgtttaaaatcaatcctatg
attaatatgggcgaagtcacaccatacgattttcttgaaattgacaaagcttaa
DBGET
integrated database retrieval system
