Staphylococcus schleiferi 1360-13: LH95_05945
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Entry
LH95_05945 CDS
T04012
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ssch
Staphylococcus schleiferi 1360-13
Brite
KEGG Orthology (KO) [BR:
ssch00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LH95_05945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssch03021
]
LH95_05945
Transcription machinery [BR:
ssch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LH95_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
AKS67010
UniProt:
A0A0K1A733
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All DBs
Position
1259671..1260780
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AA seq
369 aa
AA seq
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MSDNQVKVIKKETIDPTLTLEDVKKQLIEKGKKEGHLSHEEVADKLQNFDMDSDQMDEFF
DMINDNDIQLVNEKDSSDTDDKLNPGDLSAPPGVKINDPVRMYLKEIGRVDLLSAQEEIE
LAKRIEQGDEVAKARLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEI
GEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQ
LEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSR
SKRLKDFMD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaccaggtaaaagtaataaaaaaagaaaccattgatccgacactcacatta
gaagatgtaaaaaaacaacttattgaaaaaggtaaaaaagaaggtcatctaagccatgaa
gaggtagcagataaattacaaaactttgatatggattctgaccaaatggatgaatttttc
gatatgatcaatgataatgacatccaacttgtaaatgaaaaagatagttcagatacagat
gataaattaaatcctggcgacctgagtgcaccaccaggggttaaaattaatgaccctgta
agaatgtacttgaaagaaattggtcgtgtggatcttttgagtgcacaagaggaaatagaa
ttagcgaaacgtattgagcaaggtgacgaagtggcgaaagcacgcttagctgaagcgaat
ttgcgtcttgttgtaagtattgcaaaacgctacgtcggacgtggcatgttatttcttgac
ttaattcaagaaggtaacatgggtttaatcaaagcggtagaaaaattcgattttagtaaa
ggattcaaattttctacgtatgctacatggtggattagacaagcgattacacgtgcaatt
gccgaccaagcgcgaacaattcgtattcctgttcatatggtagagacaatcaataaatta
atccgcgtacaacgtcaattattacaagaccttggtcgtgatccagcacctgaagaaatt
ggtgaggaaatggatttacctcctgaaaaagtacgtgagattttaaaaattgcacaggaa
cctgtgtctttagagacacctattggtgaagaagatgacagccatttaggtgatttcata
gaagatcaagaagctcaaagcccttctgatcatgcagcgtatgaattattaaaggaacaa
ttagaagatgtccttgatactttaacagaccgtgaagaaaatgtacttcgtttacgtttt
ggtcttgatgatggacgaacacgtacattagaagaagtcggtaaagtatttggtgtgaca
cgtgaacgaattcgtcaaattgaagctaaagctttacgtaaacttagacacccaagtcgc
agtaaacgtttgaaagatttcatggactaa
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