Staphylococcus schleiferi 1360-13: LH95_07460
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Entry
LH95_07460 CDS
T04012
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ssch
Staphylococcus schleiferi 1360-13
Pathway
ssch03030
DNA replication
ssch03430
Mismatch repair
ssch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH95_07460 (polC)
03430 Mismatch repair
LH95_07460 (polC)
03440 Homologous recombination
LH95_07460 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssch03032
]
LH95_07460 (polC)
03400 DNA repair and recombination proteins [BR:
ssch03400
]
LH95_07460 (polC)
Enzymes [BR:
ssch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH95_07460 (polC)
DNA replication proteins [BR:
ssch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH95_07460 (polC)
DNA repair and recombination proteins [BR:
ssch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH95_07460 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AKS67292
LinkDB
All DBs
Position
complement(1566767..1571074)
Genome browser
AA seq
1435 aa
AA seq
DB search
MALKDQEKFKILLKQIHMQDYFDQDIIEQGLLTRIDVSEKSREWIFHIQLPRLLKYDDYA
VLTHAMKESFQDIANVDWKITVATHQGQDEYLLKYFGDCIDQTQLSPKVKGQLKQKRIVM
SGNVVKVLVQNDIEGQHFNKVCNGSLVKAMQRCGFDVEKVVFETDVHGHDDDLASLEAHI
QQEDEQSAREATAKIEKMKEQRAKDDNEASVTRCQIGKPIQVENVRPIESIIEEEFKVAI
EGVIFDINLKELKSGRHIVELKVTDYTDSLVLKMFTRKNKDDLEHFKALSEGKWIRAQGR
IEEDMFIRDLVMMMSDIEEIKRTPKVDKAEEKRVEFHLHTSMSQMDGVTHIGEYVAQAAK
WGHEAIAVTDHNVVQAYPDAHAAAEKHGIKMIYGMEGMLVDDGVPIAYKPTDIRLSDATY
VVFDVETTGLSNQYDKIIELAAVKVKNGEIIDKFERFSNPHEKLSETIKNLTHITDDMLR
DAPEIKEVLTDFKTWVGDAIFVAHNASFDMGFIDTNYERLGFGPSTNGVIDTLELSRTIN
TSYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMLAQLKALDVHNHQDINKKLSN
EDAYKRARPQHVTLIVQNQTGLKNLFKIVSASLVKYYYRTPRIPRSLLDQYREGILVGTA
CDEGEVFTAVMQKDQSEVERIAKYYDYIEIQPPALYQDLLDRELIRDNETLVEIYERILK
VGETNNIPVIATGNVHYLNEHDSIARKILIASQPGNPLNRSTLPEAHFRTTDEMLNDFHF
LGESRAYQVVVENTRALAERVEKVVPIKDKLYTPNMDGANEEIREMSYNNAKKLYGEDLP
QIVIDRLEKELESIIGNGFAVIYLISQRLVKKSLEDGYLVGSRGSVGSSFVATMTEITEV
NPLPPHYICPKCKKSEFFNDGSVGSGFDLPDKTCECGTQMIKEGQDIPFETFLGFKGDKV
PDIDLNFSGEYQPQAHNYTKVLFGEDYVYRAGTIGTVAEKTAFGFVKGYLNDQGIHKRGA
EVDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQNSPWMTTHFDFHSIH
DNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKETMGIFSSPEPLGVTEEEILAKTG
TFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELVRSGTCTLSSCIG
CRDDIMVYLMYAGLEPSLAFKIMEAVRKGKGLTEEFEQVMKENNVPDWYLDSCKKIKYMF
PKAHAAAYVLMAVRIAYFKVHHPLYYYASYFTVRASDFDLLTMVKDKESIRNTVKDMYSR
YMDLGKKEKDILTVLEIMNEMAHRGYRMQPVSLEKSQAYEFTIEGDTLIPPFVAVPGLGE
NVAKRIVEAREDGPFLSKEDLNKKAGVSQKIIEYLDDLGTLHDMPDKAQLSIFDM
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
gtggcattaaaggatcaagaaaagtttaagattctcttaaaacaaattcatatgcaagat
tattttgatcaagatattatcgaacaaggtctattgacacgcatcgatgtttctgaaaaa
tctcgtgaatggatttttcatatccaattaccacgattattaaaatatgatgattatgct
gtattgactcatgcaatgaaagagagctttcaagatatcgcaaatgttgattggaaaatt
acagttgcaacgcatcaaggtcaagatgagtatttattaaaatattttggagattgtatc
gaccaaacgcaactatctccgaaagtcaaaggtcaacttaaacagaaacgtattgtgatg
tctggcaatgttgttaaagtgctcgttcaaaatgatatcgaaggccaacactttaataag
gtctgcaacggaagcctggtcaaagcaatgcaacgatgtggttttgatgttgaaaaagtg
gtgtttgaaactgatgtgcatggtcatgacgatgatttagcttctcttgaggcacacatt
caacaagaggatgagcaaagtgcgagagaagcaacagcaaaaatagaaaagatgaaagag
caacgtgcaaaagatgataacgaagcatccgtaacgcgctgtcaaattggtaaaccaatt
caagttgaaaatgtgcgaccgattgaaagtattattgaggaagagtttaaagtcgctatt
gaaggtgtcatttttgatataaatcttaaagaactcaaaagtggacgccatattgtggaa
cttaaggtgacggactatacagactcattagtacttaaaatgtttacacgtaaaaataaa
gacgacttagaacacttcaaagcattatctgaaggtaaatggataagagcacaaggacgt
atcgaagaagatatgtttattcgagatcttgtgatgatgatgtcagatattgaagaaatc
aagcgtacgccgaaagtggataaggctgaagaaaaacgcgtcgaattccatctgcatact
tctatgagccaaatggatggtgtgacacatatcggtgaatatgttgcacaagcggctaaa
tgggggcatgaagcgattgcagtgacagatcataatgttgtgcaagcatatccagatgcg
catgctgcagcagaaaaacatggcataaaaatgatttatggtatggaagggatgctcgtt
gatgatggtgtacctattgcctataaaccgaccgatatacgattaagcgatgccacatat
gtcgtgtttgacgtcgagacaacaggtttatccaaccaatacgacaaaattatagaatta
gctgcagtaaaagtgaaaaacggtgaaattatagacaagtttgaacgttttagtaatccg
cacgaaaagctgtctgaaacgattaaaaatttaacccacattaccgatgacatgttacga
gatgcgccagagataaaagaggtgctaacagattttaaaacatgggtaggagacgccatt
tttgttgcacataacgcatcttttgatatgggctttatagacacaaactatgagcgactt
ggcttcggtccttcaactaatggggttattgatacacttgaactctcaagaacgattaat
acaagttatggtaagcatggattgaactttttagctaaaaagtatggtgtcgaactgaca
caacatcaccgagcaatctatgatactgaagcaactgcctatattttcattaaaatgtta
gcgcaacttaaagcattagatgtacacaaccatcaagatattaataaaaaattatcaaat
gaggatgcttataagcgagcgcgtccacaacacgttacgctgattgttcaaaatcagaca
ggcttaaagaacttattcaaaatcgtcagcgcttcacttgttaaatattattatcgtaca
cctagaattccacgttcactattagatcaatatcgtgaaggaattttagttggaaccgca
tgtgatgaaggtgaagttttcactgcggtgatgcaaaaagatcaatctgaagtcgaacgg
attgccaagtattacgactatattgagatacagccacctgcactttatcaagatttactt
gatcgtgaattaattcgcgacaatgaaacgcttgtagaaatttacgaacgaattttgaaa
gtgggcgaaacaaacaatattccagttatcgcaacaggtaatgtgcactatttaaacgaa
cacgatagtatcgcacggaaaattttaattgcttcacaacccggtaatccattgaaccga
tctactttacctgaagcgcatttcagaacaacagatgagatgcttaatgattttcacttt
ttaggtgaatctcgggcttatcaagtcgttgtagagaatacaagagctttagcagagcgt
gttgaaaaagttgtaccaattaaagataaactttatacaccaaatatggatggtgccaat
gaagaaattcgtgaaatgagttacaataatgccaaaaaactatatggtgaggatttaccg
caaatcgttattgatcgattagaaaaagagttagaaagtattattgggaacggattcgca
gttatttatttgatttcacaaagactcgtgaaaaagtcgctcgaagatggttatttagtt
ggttcacgtggatcagtgggttcaagctttgtggcgacaatgactgaaattacagaagta
aatccattgccaccgcattatatttgtcctaagtgtaaaaaaagtgaattctttaatgat
ggttcagtcggttctggttttgatttgcctgataaaacttgtgaatgtgggactcaaatg
atcaaagaaggccaagatatcccattcgaaacatttttagggttcaaaggggataaagta
cccgatattgacttgaactttagtggcgaatatcagccacaagcacataattatactaaa
gtattgtttggagaggactacgtttatcgtgcaggaacaattggtacagttgctgaaaaa
acagcattcggttttgtgaaaggttatttaaatgaccaaggtatccataaacgaggcgca
gaagttgatcgtttagttaaaggttgtaccggtgttaaacgaacaacaggtcaacaccca
ggtggtattatcgtagtaccagattatatggatatctatgactttacaccgatacaatat
cctgcagatgatcaaaattcgccttggatgacgacgcatttcgacttccactcgatacac
gataatgtattgaaactggatattctcggacacgatgatccgacaatgattcgtatgtta
caagatttatcaggtattgatcctaaaacaatacctgtagatgataaagaaacgatgggc
atctttagctcccctgagccattaggtgtaacagaagaagaaatattagcgaaaacagga
acgtttggtgtacctgaatttgggacaggctttgtaagacaaatgttagaagatacgaag
ccaaccactttttccgagctcgtccaaatttcaggtttatcacatggaacggatgtatgg
ttaggaaatgcacaagaacttgttcgaagtggaacttgtacactttcgagctgtattggt
tgtcgtgacgacatcatggtttatttaatgtatgcaggtcttgaaccttcacttgcattt
aaaattatggaagcggtacgtaaaggtaaagggttaacagaagaatttgaacaagtcatg
aaagagaataacgtgcctgattggtatctcgattcttgtaaaaaaattaaatatatgttt
ccgaaagcccacgcagcagcgtacgttcttatggctgtgagaatagcttattttaaagtg
catcatcctttatactattatgcaagttattttacagtaagagcatccgattttgattta
ttgacaatggtgaaagataaagaaagcattcgaaatacagtgaaagacatgtattcacgt
tatatggatctcggtaaaaaagaaaaagacattttaaccgtgctggaaattatgaatgaa
atggcacatcgaggttatcgtatgcaaccagtaagccttgagaaaagtcaagcttatgaa
tttacaatcgaaggggatacgttgattccgcctttcgttgctgttcctggacttggtgaa
aacgttgcaaaacgtatcgtggaagcgagagaagatggtccatttctatccaaagaggat
ttaaataaaaaagcaggggtttctcaaaaaattattgaatacctcgatgatttaggaact
ttacatgatatgccagataaagcacaactctcgatttttgatatgtaa
DBGET
integrated database retrieval system
