Sporothrix schenckii: SPSK_00088
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Entry
SPSK_00088 CDS
T05555
Name
(RefSeq) translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_00088
03012 Translation factors [BR:
ssck03012
]
SPSK_00088
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
SPSK_00088
Translation factors [BR:
ssck03012
]
Eukaryotic type
Initiation factors
eIF-3
SPSK_00088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
RRM_1
Motif
Other DBs
NCBI-GeneID:
27662345
NCBI-ProteinID:
XP_016586357
UniProt:
A0A0F2M672
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MAPSFDHLREADLDDDEYDEDEVDISDLRAKYEVQLEQGFDTFVVIDGLPVVTEEQKPKL
VKFLLKKLNTVGRAREDSIEMPMKGEDGKSLGFAFVEYSSAGEAAAAVRQLDNVALDKRH
TLRVNKLTDIERYGREGRIHDEYEPPHIDEFVPRDHLRSFLADPSGRGRDQFVQYRGDNV
AVVWNNEKDNQEVIVDRPNWTESFVQWSPLGTYLTSVHIQGVQLWAGPKWDRVGRFPHPF
VNLVAFSPQENYLVTWSNRPISISEEGHPALSIDDDGKNYVIWDIATAKPLRSFANIDIP
IGPGAEGPDGVKAPRKQPWPAFKWSSDDKYVARLTQGQSISVYELPRMNLLDKTTIKIEG
VMDFDWAPARPQRDGVKTYEQLFCYWTPEIGSNPAKVGLMSIPSKEIVRTLNLFSVSDAK
LHWQSEGAYLCVKVDRHSKSKKSQATTLEIFRVKEKGVPVEVLDTIKDTVINFAWEPKGD
RFVIITTTEPVGPTAVPPKTSVSFYCPEKAKGNAVGNFKLLRTLEKKNSNAIYWSPKGRF
VVVATVHNQQSSELEFFDVDYEGEKPEAEKDMTANLQLMNTADHYGVTDVEWDPSGRYVA
TWASAWKHSMENGYHMYNFKGELLREEPIDKFKQLQWRPRPPTLLSKEEQKAIRKNLREY
SRVFDQEDAERIAGADQEVVDRRRELLAEWYSFRESMEEELAEERELQNISANVVEEMLK
AKTEALGAVEDQDKVVEEIVEEVLEETEEIVQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctctttcgaccacctccgcgaggcggatctcgacgacgacgagtacgacgag
gatgaggtcgatatctccgacctgcgcgcaaagtacgaggtgcagctggagcagggattc
gatacgtttgttgtgattgacggcctgccggtcgtcacggaggagcagaagccgaagctg
gtcaagttcctgctgaagaagctcaacacggtgggacgtgcgcgtgaggacagcatcgag
atgccgatgaagggcgaggacggaaagtctcttggctttgctttcgtggagtattcgtct
gccggcgaggccgcggccgccgtccggcaactcgacaacgtcgcgctcgacaagcgccac
acgctgcgcgtcaacaagctgaccgacattgagcggtacggccgcgagggccgcatccac
gacgagtacgagccaccacacattgacgagtttgtgccccgcgaccacctgcgctcgttc
ctagccgatcccagcggccgcgggcgcgaccagttcgtccagtaccgcggcgacaacgtc
gccgttgtctggaataacgagaaggacaaccaggaggttatcgtcgaccgtcccaactgg
accgagagcttcgtgcagtggtcgccgctgggcacatacctgacgtcggtgcacatccag
ggtgtgcagttgtgggcaggccccaagtgggaccgtgtcggccggttcccccatcccttt
gtcaacctcgtcgccttctcgccgcaggagaactacctcgtcacgtggtccaaccgcccc
atctccatctccgaggagggccaccccgcgctgtccatcgacgacgacggcaagaactat
gtcatctgggacattgccacggccaagccgctgcggtcgtttgccaacatcgacatcccc
attggccccggtgccgagggccccgacggcgtcaaggcgccccggaaacagccgtggccg
gccttcaagtggtcgtcggacgacaagtacgttgcgcggttaacacagggccagtccatc
tccgtctacgaactgccccgcatgaacttgctggacaagacgacgatcaagattgagggt
gtcatggactttgactgggcacccgcgcggccgcagcgcgacggcgtcaagacgtacgag
cagctgttctgctactggacgcccgagattggcagcaaccctgccaaggtcggcctcatg
agcatcccgtccaaggagattgtgcgcacgctgaacctgttcagcgtgtcggacgcgaag
ctgcactggcagtccgagggcgcgtatctgtgcgtcaaggtcgaccgccactccaagtcc
aagaagtcgcaggccacgacgctggagattttccgcgtcaaggagaagggcgtgcccgtc
gaggtgctcgacaccatcaaggacacggtcatcaactttgcgtgggagcccaagggcgac
cggttcgtcattatcacgacgaccgagccggtgggcccgacggccgtgccgcccaagacg
tccgtgtcgttctactgccccgagaaggccaagggcaacgcggtcggcaacttcaagctg
ctgcgcacgctcgagaagaagaacagcaacgccatctactggtcgcccaagggccgcttc
gtcgtggtcgccaccgtgcacaaccagcagagctcggagctcgagttctttgacgtcgac
tacgagggcgagaagcccgaggccgagaaggacatgactgccaacctgcagctcatgaac
accgccgaccactacggcgtgacggacgtggagtgggacccctctggccggtacgtggcg
acgtgggcgtcggcgtggaagcactcgatggagaacggctaccacatgtacaacttcaag
ggcgaactgctgcgcgaggagccaattgacaagttcaagcagctgcagtggcgcccgcgc
ccgccgacgctgctgtccaaggaagagcagaaggcgatccgcaagaacctgcgcgaatac
tcgcgcgtcttcgaccaggaggacgccgagcggatagccggcgccgaccaggaagtcgtg
gaccgccgccgcgagctgctggccgagtggtacagcttccgcgagtccatggaggaggag
ctggccgaggagcgcgagctacagaacatctccgccaacgtcgtcgaggagatgctcaag
gccaagacggaggccctgggtgccgttgaggatcaggacaaggtggtcgaggagattgtc
gaggaggtcctcgaggagacggaggaaattgtgcagtaa
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