Sporothrix schenckii: SPSK_00245
Help
Entry
SPSK_00245 CDS
T05555
Name
(RefSeq) RNA lariat debranching protein
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssck03041
]
SPSK_00245
03009 Ribosome biogenesis [BR:
ssck03009
]
SPSK_00245
Spliceosome [BR:
ssck03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SPSK_00245
Ribosome biogenesis [BR:
ssck03009
]
Eukaryotic type
90S particles
RNase
SPSK_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DBR1
Metallophos
Motif
Other DBs
NCBI-GeneID:
27662499
NCBI-ProteinID:
XP_016586633
UniProt:
A0A0F2M2P3
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MAEFPGLREVGGVRVAIEGCGHGALDAIYGAIDASCAERGWDGVDLVIIGGDFQATRNAS
DLNLMSVPPKYRAMGDFHLYYSGARKAPYLTVFIGGNHEAAGYLWELFYGGWVAPNIYYW
GAANVLRFGPLRLAGMSGIWKGSDYRRPHHERLPFRQDDIKSFYHVRECDVRKLLQIREP
VDIGMSHDWPRAIEWHGDNEQLYRMKPHFRRESMEGTLGNTAAEYVLDRLRPRFWFSAHM
HCKFAAIKQFDPPEMEDPVRAAQTQQALKEERASAANEATTPRKTSSLPPPTQTADAGNP
DEIDLDLGDNDGDDDKGADSAPAPAEKKPDATVSTELNENEKKEVSAALPNIDGVSSELL
AQLPASFQRPLPSQQQYQNRPHVKPGQPVPPTITNTQVNFLALDKCLPGRHFLQLCEIGP
ADPSVTVGAVELPIEKKDDTAEGGEAADAIDAAETAASTRPRFRLEYDPEWLAITRAFAK
DLTVGERDVPVPLDQGEAHYRTLIDTERAWVDENIVAKGLLAVPHNFAITAPVHAPEPGQ
PETYAKGQPNEYTNPHTAAFCELIQVPNIWHATKQERGERKQRGPGASEPRRPYGGDDNR
GYGGGGYGGGGYGGGGYRGRGRGGRGGGFSRGGGRGRGRGGYY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttcctggcctccgcgaggtcggtggggtgcgagtggccattgagggttgc
ggtcatggtgcacttgacgcgatttacggtgctattgacgcgtcgtgcgcagagcggggc
tgggatggtgttgaccttgtcatcattggcggcgacttccaggccacgcgcaatgcgtca
gatctcaacctcatgtctgtgccgcccaagtaccgcgcgatgggcgacttccatctctac
tattcgggcgcccgcaaggcgccgtacctgaccgttttcatcggtggcaaccacgaggct
gccggctacctctgggaactgttctacggcggctgggtggcgcccaacatctactactgg
ggcgcggccaacgtgctgcgttttggtcctttgcggctggcaggcatgagcggcatctgg
aaagggtcagactaccgccggccacatcacgagcgcctgccgttccggcaagacgacatc
aagagcttttaccatgtgcgcgagtgtgacgtgcgcaaactgctgcagatccgtgagccc
gtcgacattggcatgagccacgactggccgcgcgcgattgagtggcacggcgacaatgag
cagctgtaccgcatgaagcctcacttccgccgtgagtccatggagggtacgctgggcaat
acggcggccgagtacgtcctagaccggctgcggcctcggttctggttctcggcgcatatg
cactgcaaatttgcagctatcaaacagttcgacccaccagagatggaagaccccgtacgg
gccgcacagactcagcaggccctcaaggaagaaagagcgagtgctgctaatgaagcgact
acgccacgcaaaacaagctcactcccaccaccgacacaaactgccgatgcaggcaaccca
gatgagatcgatctggaccttggcgacaatgatggtgatgacgacaaaggcgctgacagt
gccccggcaccagccgagaagaagccggacgctacagtatcgactgaactgaacgaaaac
gagaaaaaagaggtgtcagccgctcttcccaacattgatggcgtttcgagcgagctctta
gcacagcttccggcctcgtttcagcgcccgctcccatcacagcagcaataccagaatcgc
cctcacgtgaagccaggccagccagtgccgcccacaatcacaaacacccaggtcaacttc
ttggccctggacaagtgcttgccagggcgtcatttcctgcagctgtgcgaaattggtcct
gcggaccctagtgtcacggtcggggccgtcgagttgccaattgaaaagaaagacgacaca
gccgagggtggcgaggcagccgacgcaatcgacgctgctgagacagctgccagcacaagg
cctcgcttccgcctggaatatgacccagagtggctcgccattacacgtgcttttgccaag
gacctgaccgttggtgagagggacgtaccagtgccgctcgaccagggcgaggcgcactac
cgcacgcttatcgacacggaacgtgcatgggtagacgagaacattgttgccaaaggcctc
ttggcagtaccccacaactttgctatcacggcgcctgtacacgcgcccgagcccggtcag
ccggagacgtatgctaagggtcagccaaacgagtacacgaacccgcatacggcagccttt
tgcgagttgatccaagtgcccaacatttggcacgcaaccaagcaggaacggggcgagagg
aagcagcgggggccaggggcctcggagccccggcgcccgtacggcggtgatgacaaccgt
ggctatggaggcggtggctacggcggtggtggctacggcggtggtggttacagaggaaga
ggcagaggaggccgcggtggtggattttcccgaggcggcggccggggtcgtggaagaggc
gggtattattag
DBGET
integrated database retrieval system
