Sporothrix schenckii: SPSK_00301
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Entry
SPSK_00301 CDS
T05555
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ssck
Sporothrix schenckii
Pathway
ssck03022
Basal transcription factors
ssck03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPSK_00301
09124 Replication and repair
03420 Nucleotide excision repair
SPSK_00301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_00301
03036 Chromosome and associated proteins [BR:
ssck03036
]
SPSK_00301
03400 DNA repair and recombination proteins [BR:
ssck03400
]
SPSK_00301
Enzymes [BR:
ssck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SPSK_00301
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SPSK_00301
Chromosome and associated proteins [BR:
ssck03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SPSK_00301
DNA repair and recombination proteins [BR:
ssck03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SPSK_00301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
DUF5667
KpnI_N
HsdM_C
GARP
Motif
Other DBs
NCBI-GeneID:
27662552
NCBI-ProteinID:
XP_016586562
UniProt:
A0A0F2M6T9
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MSEIEKALVELKALMKYRAQVLGSEEEFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRS
LTAGFVREKKERGDDVDVCIYHDNLDKLEPHNLIPNGVWTLDGLLRYGKEHKQCPYFTSR
RMMQFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSTDITEDSL
RKATRGAQNLERRINEMRETDQKQLENEYQKLVQGLREADEARQEDAFMTNPTLPEDLLT
EAVPGNIRRAEHFVAFLKRFIEYLKASTRPVFQRSGLLKM
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagatcgagaaagccctcgttgagctcaaagcattgatgaaataccgagcgcag
gtgcttggtagtgaagaagaatttcgaggactcgggctgaccagtcgcaagaacctttgc
cttcacccatccgtgaagcgcgaaaaaagcggcgcagttgttgatgcgcgatgccgcagc
ctcactgctggttttgtcagggaaaaaaaggaacgcggtgacgacgtcgatgtctgcatt
taccacgacaatctcgacaaacttgaacctcacaacttgattcccaacggcgtttggacg
cttgatggtcttctgcgttatggtaaagaacacaagcagtgcccgtattttacgtctcgt
cgtatgatgcaattttgcaacgttatcatttactcgtaccactacctactcgatcctaaa
atcgcagagagggtctcgaaagagctctcgaaagactgcattgtggtttttgacgaagcc
cacaacattgacaatgtttgcattgaatccctaagcaccgacattacggaggattccctt
cgcaaggctacaagaggggcacagaacctggaacggagaataaatgagatgcgtgaaacg
gaccaaaagcagttggaaaatgagtatcaaaaactagttcaggggttgagagaagcagac
gaggcacgccaagaagacgcttttatgacaaatccaacactacccgaagatctccttacc
gaagctgttcctggcaacatccgacgggccgaacattttgtcgctttcctcaaaaggttt
attgaatacctgaaggcaagtacacgacctgtatttcagcgctcaggtttgctgaagatg
tga
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