Sporothrix schenckii: SPSK_00375
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Entry
SPSK_00375 CDS
T05555
Name
(RefSeq) superkiller protein 3
KO
K12600
superkiller protein 3
Organism
ssck
Sporothrix schenckii
Pathway
ssck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPSK_00375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_00375
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
SPSK_00375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_16
TPR_8
TPR_14
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_12
TPR_7
ARM_TT21_C
TPR_11
ARM_TT21_5th
TPR_Slam
TPR_9
Tim44
Motif
Other DBs
NCBI-GeneID:
27662621
NCBI-ProteinID:
XP_016582628
UniProt:
A0A0F2LR21
LinkDB
All DBs
Position
Unknown
AA seq
1511 aa
AA seq
DB search
MAGPKKPVIAASGAKTQLKAISELLKQQKFDDAAQQARDVLESDPKSYQALIFLGFALDK
AGKLDEAVPVYEEATRVKPADPQGWQGLIQVYEKQGAAAIPKYKEAALQLSLIFRDVEDL
YKCQGVVDKFVGFARSKGDSMQIVSALGIILPDSPIYPTLVGRVPGPAATYETIAKLVET
DETRRINTLIGERRTRIGARLVDVTAEVKSEVFSTSPLTHIYSELINWTRDDDLRHEYEE
KLLAYRVDRLSAFSGDAKVAERDEVIKFAKGMVIIKQPFQLAWDIAVDWEDPAEIRDWDA
ALLWEYRTLFPESGLGKALSGFLTSDLSPFGEPPVDPKQEAAERKKTTKERVAGEEEEQD
VPEDEVSDEADQNGKDGKEGEKTKRMPRRKIVPLPTADEERLALLQEGVTESKAFLASRM
LSAWYQNAEEHENNIELVRKTLKRLEVRKNSTGMTFQHTKDALDVSLATSLIYHQVPHNH
PEAKRLFENVLAHNDKAQLALIGMGFICEEEMDYNAAATYLERALALDKNDLRVRSEAAW
VHTLKGNYGHARGELEACIPLLTQQVQSKVVRIAQPAQKLLALTQYRLGVCVWNLDPSRP
ARKDRNGAYKLFLSALKNDLTLAPAYTSLGVFYADYGKDRKRAFKCFMKAIELSDGELEA
GRRLVQSFADKRDWESIELVAQRVVDSGLATPPWGSKKPSHSWPYAALGTAQLHQKEYNK
AMMSFRIATRVSQTDYHSFIALAETYLRARMHYSAIRAIDQARRIAAEGGLDESYERWFT
DYLLANIYRGVGEHDKAIALYESILEARPNEEGVLIALMHAMVESAESCIKAGLFGEAVS
KATETLSFAGKVPVETAETTYGFWTAVASACSVFSTVQGKATAFPAAQAASLVMLGSGRD
AEHAAYKLLQETDRVGTAVILAYETFSDSERIGVDLTRCLHTTILAYKRALDVTPANDNR
MRAVAHYNLGWAEYRAHTCLPEDLRSSLNGYLRAAIRCFKRAIELEAGNRKFWNALGVAT
SAVHAPVAQHAFARSLYLGRGRASVWANLGTLALLHDDAELANHAFAEGQSTDPDHGLSW
LGQGYVALQFGEGAEARSLFLHAMDLSDASSLAAREQYAISLFDHLVDEETLNDKEKAAK
TSTTDLARPLIGLEQVRRLQPQQLPYAHLFALYRERIHDKANTSTLLEEICAALEADFEA
TQSVESLNRVAVAKADLARAFVAMGNYEAAIECSEMAVQLVDDSDGNSVDGELPAAARKK
VRLSANLAAGLARFFRQDFEGALADFEAIFAEDAASGGDGPARNPDVVCLLAQVLWASGR
EDARQRAQDELFAVIETHPDHVHAILLLGVVALLNGDVESADAVVAELAGLEEGKSQAIV
TVADQGRISQVMHALANPGRETDAASRRATCCQAQRDIMLHPHLPRGWINLAEEAEEAEV
DETAADDADEDFASDMALRLTLNLLPPRGTLGAEDLAKACLGTRRPADAQVAIFAAPWLQ
DGWQALAEAIS
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atggccgggccgaaaaaaccagtcatcgcggcgtcgggcgccaagacacagctcaaggct
atcagcgagctcttgaagcagcaaaagtttgacgacgcagcacaacaggcccgcgatgtg
ctcgagagcgacccaaagagctaccaggcgctcatcttcctgggcttcgccctggacaag
gccggcaagctcgatgaggccgtgcccgtgtacgaagaagccacacgtgtgaagccggct
gatccacagggctggcagggcttgatccaggtgtacgagaagcaaggcgctgcggccatc
ccaaaatacaaagaggcggccctccagctgtcgctcatcttccgcgatgtggaggactta
tacaagtgccaaggcgttgtcgacaagtttgtcggatttgcgcgcagcaagggcgacagc
atgcagatcgtctctgcactgggcattatcctgcccgactcgcccatctacccgacgctt
gtgggccgtgtgcccggccctgcggccacctacgaaaccattgccaagcttgtcgagacc
gacgagacaaggcggatcaacacactgattggcgagcggcgtacacgcataggcgcgagg
ctggtggatgtcacagccgaagtaaagagtgaggtgttttccacgagcccgctcacgcac
atctacagtgagctgatcaactggacgcgcgacgacgacttgcggcacgagtacgaagag
aagctgctggcgtaccgcgtggaccggctgtctgcgttctcgggcgatgccaaggtcgcc
gagagggatgaggtcatcaagtttgccaaaggaatggtgattatcaaacagccgttccag
ctggcctgggacattgcagtcgattgggaggacccagcagagattcgcgactgggacgcg
gcattactgtgggagtaccggacgttgttcccagaatcggggctggggaaggcgctctca
ggatttctgacgagcgacctgtctcctttcggcgagccaccggtcgatccgaagcaggaa
gcagcagagaggaagaaaacaacaaaagaacgcgtagcaggcgaagaagaagaacaagat
gtgcccgaggatgaagtgagcgacgaggccgaccaaaatggaaaggacggaaaggaggga
gagaagacaaaacgcatgcccaggagaaagattgtgcctctgccgacggccgacgaggag
cgccttgcattgttacaagagggcgtgaccgaatccaaggcgttcttggcgtcccggatg
ctcagcgcgtggtaccagaacgccgaggagcacgaaaacaacatcgagctggtgcgcaag
accctgaagcgcctggaggtccgcaagaacagcacaggcatgaccttccagcacaccaag
gacgccctggacgtgtcgctggctacgtcgcttatctatcaccaggtgccgcacaaccac
cccgaggcaaagcggctatttgaaaacgttcttgcgcacaacgacaaggcacagctggct
ctgatcggaatgggcttcatctgcgaggaggagatggactacaacgcggctgccacctat
ttggagcgcgctctcgccctcgacaagaacgacctgcgcgtgcgcagtgaagcggcctgg
gtgcatacgctcaagggaaactacggccacgccaggggcgagctggaggcctgcatcccg
cttctgacgcagcaagtgcagagcaaggtcgtgcgcattgcgcagcctgcacagaagctg
cttgcactgacacagtaccgcttgggagtctgtgtgtggaacctggacccgtcgcgcccg
gcacgcaaggaccgcaatggcgcgtacaagctgttcctcagtgcgctcaagaacgatctg
accctggcgccggcatatacgagtctgggcgtcttctacgccgactacgggaaggaccgc
aaacgcgcattcaagtgcttcatgaaggctatcgagctgtccgacggcgagctcgaagcg
ggccggcggctggtgcagtcatttgcggataagcgcgactgggagagcattgagctcgtg
gctcaacgtgtcgtggattctggcttggcgacaccgccgtggggctcaaagaagccatcg
catagctggccgtacgcggcactcggcacagcgcagctgcaccaaaaagaatacaataag
gccatgatgtcgttccgcattgctacgcgcgtgtcgcaaacagactaccattcgtttatt
gcgctggccgagacgtatttgcgggcccgcatgcactactcggccatccgggcgatcgac
caggcgcggcgaatcgcggccgaaggtggcctcgacgagtcgtacgagcggtggttcacg
gactacctgctggccaacatttaccgcggtgttggcgagcacgacaaggcaattgcgcta
tacgagtcgattctggaggcgcggcccaacgaagaaggcgtcctgatcgcgctgatgcac
gccatggtggagagtgctgagagctgtatcaaggcgggactgtttggcgaggccgtcagc
aaggcgacagaaacgctgtcgtttgccggaaaggtgcccgtcgagacagcggagacgacg
tacggcttctggacggcggtggcgagcgcgtgcagcgtcttttcaacggtccaaggcaaa
gcgacggcgttccctgctgcccaagcggcgtctctagtgatgcttggatctggtagggat
gcggagcacgcggcttacaagttgctgcaggagaccgaccgtgtcggcacggcggtgata
ttggcgtacgagacgttctcggacagtgaacggattggcgtggacctcacacgctgcctg
catacgaccattttggcatacaaacgtgcgttggatgtcacaccggccaatgacaacaga
atgcgcgcagtggcgcattacaacttgggctgggccgagtaccgggcacacacctgcctg
cccgaggacctccgcagcagtctcaacggctacctgcgcgcggcgatccggtgtttcaag
cgggcaattgagctcgaagcgggcaaccgcaagttctggaatgcgctgggcgtggcgacg
agcgccgtgcacgcaccggtggcgcagcatgcttttgcacggagtctataccttggccgc
ggtcgtgcgtcggtctgggctaatctgggcacgctggcgctgctgcacgacgatgctgag
ctggccaaccatgcctttgccgagggccagtcgacggatcctgaccacgggctcagctgg
ctgggacagggctatgtggcgttgcagtttggcgagggagccgaggcgcggagcctgttt
ttgcacgccatggatttgtcggacgcatcgtcgctggctgcgcgggagcagtatgccatc
tcgctgtttgaccacctggtggacgaggagacgctgaacgacaaggagaaggcggctaag
acgtcgacgactgacctcgcacggccgctgattggtctcgagcaggtgcgccggctgcag
ccccagcagctgccgtatgcacacctctttgcactgtaccgcgaacgcatccacgacaag
gcaaacacgtcgacgctcctcgaggagatttgcgcggcgctcgaggccgactttgaggcg
acgcagtcggtcgagtcgctcaaccgcgtggccgtggccaaggccgatctggcgcgcgca
tttgttgccatgggaaactacgaggccgccattgagtgcagcgagatggccgtgcagctc
gtggacgacagcgatggcaacagtgtcgacggcgagttgccggccgccgcgcgcaaaaag
gtgcggctatcggcaaacttggcggcgggccttgcacgctttttcaggcaagactttgaa
ggcgctctggccgactttgaagccattttcgccgaggacgccgccagcggcggagacgga
ccggcccgcaacccagacgttgtctgtctgttggcacaggtgctgtgggcctcgggccgt
gaagacgctcgccagcgcgcgcaagacgagctgtttgcagtcatcgagacacacccggac
cacgtccatgcgattttgttgctgggcgttgtggccttgctgaacggcgacgtcgagagc
gccgatgctgtcgtggctgagttggcaggtctggaggagggcaagtcacaagcaatcgtc
accgttgccgaccaggggcgcattagccaggtgatgcacgcgctggccaacccggggcgc
gagactgatgcggcaagccgacgagccacgtgctgccaggcgcagcgtgacattatgctg
cacccacatctgccacgcggctggataaacttggctgaagaagccgaagaggcagaagtc
gacgagacggccgcggacgacgcggacgaagactttgcgagcgacatggccctgcggcta
acgctgaacctgttgccaccgcggggcacactgggtgcggaagatctggccaaagcctgt
ttgggcacgcggcggccagcagatgcacaggtggccatctttgcggcgccctggctgcaa
gatggctggcaggccctggcagaggccatctcatga
DBGET
integrated database retrieval system
