Sporothrix schenckii: SPSK_00384
Help
Entry
SPSK_00384 CDS
T05555
Name
(RefSeq) U3 small nucleolar RNA-associated protein 22
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
ssck
Sporothrix schenckii
Pathway
ssck03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPSK_00384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssck03009
]
SPSK_00384
Ribosome biogenesis [BR:
ssck03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPSK_00384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap
Nrap_D2
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
27662630
NCBI-ProteinID:
XP_016582629
UniProt:
A0A0F2LQZ8
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MGSSGATKKSSPTGQHPANRQSATITTLTRQWLALPTTQDMDANPAKRRKTDHSGAGEPY
GALPFDAAAASAGLFRPSTFILETAELLQQSRVDYGKMLPNAEELLRNVKTAVESVDTHG
PMLISKASASFEKKNAIKIPYPTPHPAEDSLLKLAMEPPAHCNVVGSYVLKTMVRSQRDA
TVDMIVEMPKTLFQDKDYLNLRYFYKRAYYLAHVTKAIAKSAALSDAIADASFAYLGDNP
LLPILVLTPKATTPSAGKTSRNSTLECKIRIVPCCPGGLFPSTKLLAGRNCLRPDAGTSE
TTTTSTTESSESKTLPPTPFYNTTLKAESAYLPYLKLLHQAQKSCSAFVDACLLGRVWLQ
QRGFGSSMSRGGFGAFEFATVVALLLQTSSQKRTSSGSGASGKKAASILSPSLSSTQIFK
AVVQFLASTDFRTKPRVLGGQVADVDSIKEGTPVLFDAGSRQLNIAYKMSAWSAGLLRQQ
AKRTHDLLKDDSVIDQFTPTFIARADIPLEAFDMVVRLRLPTSASSAAHSEAAAHLSRHG
AVWDFGDSVFQTMKRALGDRAQLIHIQLPTSSAWSVDATLPEPSSKGAPPTYVLLCISFD
AANMARHIDHGPPAEDKKEAKKFREFWGERAELRRFKDGSILETLVWTAGQSPAGLCEEI
TRYILGQRLGLIVEGDIQVVAGSDTASSFSALVPITPVVDAAAFTLAREAFTTLEADIRA
LEDLPLHVRQVSAIDPALRSATISPPAVQSPKAVLHPMEVALFFEASGKWPDNLAAIQRA
KMAFLLRIGESLEAAMAARGDSSSLETFVGLENDEQAGTRKTSFANLAYLDIVYRDSAAF
RLRIHSDLEEAILSRQTHDKTLDQHTRTTSASLLAAVRRTFSTLPLHTQTIATYCTRFPA
LSPTIRLVKRWFSAHKLTSHVSEEFVELVVLHVFLRPYPWQTPASVAPGLLRVLQFLARW
DWRTEPLMVDTSGMAPMLPEEEAAAAAAKAVDPRTRLEAWRKIDPNMNHTVLFVSTTHDS
SGTAFTTDSSGGQSRPQPSKVVASRMTSLARAACRLVKETDVSSSPTVSGSRAHLDPALL
FQPSLGDFDILIHLSPRIVKRLVKGDIAEDGSNSGSASSKPRRSIYKNLDARTGRDLHVL
PAHPVRLLLDQLDHVYGGGASAGGGGVGPIVFFYGAPRDEDNDGDHIVAALWNPQLHPRS
FRINVPCSFRPVVAANKRNKAKNDDAAAAEPLIEVNREGILAEIARIGGSLIDRIEVVEK
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctccggcgctactaagaaatcatcaccaacaggtcaacatcctgccaaccgt
caatcggcaaccatcacgaccctcacccgacagtggctagccctacccacaacccaagat
atggacgccaatccggccaagcggcgcaagaccgaccactcgggtgccggcgagccctac
ggggcgctgccctttgatgcggccgccgcgtcggctggcctcttccggccaagcaccttt
atcctcgaaacggccgagctgttgcagcagagccgtgtcgactacggaaagatgctgccc
aatgcggaggagctgttgcgcaatgtcaagacggccgtcgagtcggtcgacactcacggg
ccgatgctgatctcgaaagcctccgcgtcctttgagaaaaagaacgcaatcaagatcccc
tacccgacaccccaccctgccgaagactcgctgctcaagctcgccatggagccgccagca
cactgcaacgtcgtcggcagctacgtactcaagacgatggtccgctcgcagcgcgatgct
accgtcgacatgattgtcgagatgcccaagacgctcttccaagacaaggactacctcaac
ctgcggtacttctacaagcgcgcttactatctggcacacgtcaccaaggccatcgccaag
tcggccgccctctccgacgcgatagccgatgcgtcctttgcctacctcggcgacaatccg
ctgctgccgattttggttctcacgcccaaggcgacgactccgagcgcgggaaagacgagc
cggaattcgactcttgagtgcaagatccgcattgtgccttgctgccctggtggcttgttc
ccgtccacgaagctcttggccggcaggaactgcctccggcctgacgccggcacatccgag
acgacgacgacctccactaccgaatcgagcgaatcaaagaccttgccgccgacgccgttc
tacaacactaccctcaaggccgagtctgcctacctgccgtacctcaaactgctgcatcag
gctcagaagtcctgctcggcctttgtcgatgcgtgtctccttggccgcgtgtggctgcag
cagcgcggcttcggcagttccatgtcccgcggcggttttggtgcctttgagtttgcaaca
gttgtcgcgctgctgttgcagaccagcagccagaagcgcacctcgtccggctcgggagca
tccggcaagaaggccgcatcgatcctctcgccctcgctcagcagcacgcagatcttcaag
gctgttgtccagttcctggcctccactgacttccgcacaaagcctcgtgtgctcggcggc
caagtggccgatgttgattcgattaaggagggtacacccgtcctgttcgatgccggcagt
cgccagctgaacatcgcctacaagatgagcgcgtggtcggcgggtctgctgcgccagcaa
gccaagcgcacgcacgatctgctcaaagacgactctgtcattgatcagttcacgccgacg
ttcatcgcccgtgccgacattcccctcgaggctttcgacatggtggtgcgcctccgcctt
ccgacctcggcatcctctgccgcacacagcgaggcggccgcccacctcagccgccacggt
gccgtctgggactttggcgacagcgtcttccagacgatgaagcgcgccctgggcgaccgt
gcacaactgatccacatccagcttccgacgtcttcggcctggtcggtcgatgcaacgctc
cccgaaccctcgtccaagggtgcgccacccacctacgtccttctctgcatctcgttcgat
gctgccaacatggcccgccacatcgatcacggcccgcccgccgaggacaagaaagaggcc
aagaagttccgcgagttctggggcgagcgcgccgagctgcgtcgcttcaaggacggcagc
attctcgagacgcttgtgtggacggccggccaatcgccggccggtctgtgcgaggagatt
acgcgttacatccttggtcaacgcctgggcctcattgtggaaggagatattcaggttgtg
gccggcagcgataccgcgagcagcttctcggcgcttgtgcccattacacccgtcgtcgac
gctgccgcgttcacgcttgcgcgcgaggcttttaccactctcgaggccgacatccgtgct
ctcgaggacctgccactgcatgttcgccaggtctcggccatcgacccggcgctgcgctcc
gctaccatttcaccacctgctgtgcagtcgcccaaggccgtcctgcacccgatggaggtc
gccctattcttcgaggcgtccggcaagtggcccgacaacctggctgccatccagcgcgcc
aagatggcattcctgctgcgcattggcgagtcgctcgaggccgccatggccgcaaggggc
gacagcagctccctggagacctttgtcggcctcgagaacgacgagcaggccggcacccgc
aagacgagcttcgccaacctggcctaccttgacattgtctaccgagacagtgctgcgttc
cgcctgcgcatccacagcgacctcgaagaggccattctgtcgcgccagacccacgacaag
acactcgaccagcacacgcgcaccaccagcgccagcctgctggccgccgtgcgccgcaca
ttcagtacgctgccgctgcacacgcagaccattgcaacatactgcacgcgcttcccggcg
ctgtcgcccacgatccgcctcgtgaagcgctggttcagcgcccacaaactgacgtcgcac
gtgtccgaggagtttgtcgagctcgtcgtgctgcacgtgttcttgcggccgtatccctgg
cagacgcccgcgagtgtggctccaggcctactgcgtgtactgcaattcctcgcgcgctgg
gactggcgcaccgagccgctcatggtcgacacgtcgggcatggcaccgatgctgcccgag
gaggaagccgctgccgctgccgccaaggccgtcgacccacgcacacgtctcgaagcctgg
cgcaagatcgacccgaacatgaaccacaccgttctctttgtctcgaccacgcacgacagc
agcggcacagccttcaccaccgacagcagcggcggccagagccgaccgcagccgtccaag
gtggtagcctcacgcatgaccagtctagcgcgtgccgcctgtcgtctggtcaaagagacg
gacgtgtcgtcgtcgcccaccgtctctgggagtcgcgcccacctcgatcctgctctgctc
ttccagccgtcgctcggtgactttgacatcctcatccacttgtcgccgcgcatcgtcaag
cgcctcgtcaagggcgacattgctgaggacggcagcaacagtggcagcgcgtcttctaag
ccgcgccgatccatttacaagaacctggacgcccgcaccggacgcgatcttcatgtcttg
cctgctcacccggtccggctcttgctggaccagctggaccacgtctacggtggaggtgcg
agcgcaggcggcggtggtgtcggtcctattgtcttcttctatggcgctcctcgggacgag
gacaatgacggcgaccacattgtcgccgctctatggaatccgcagttgcacccgcggtcc
ttccgcatcaacgtgccatgctcgttccgtcccgtggttgccgcaaacaagaggaacaaa
gccaagaacgacgatgccgctgccgccgagcccctcatcgaagtcaaccgtgaaggcatc
ctagctgaaattgcacgcattggcggctcgctgattgaccgtattgaggtcgtggagaaa
tag
DBGET
integrated database retrieval system
