Sporothrix schenckii: SPSK_00396
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Entry
SPSK_00396 CDS
T05555
Name
(RefSeq) argonaute
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_00396
03036 Chromosome and associated proteins [BR:
ssck03036
]
SPSK_00396
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SPSK_00396
Chromosome and associated proteins [BR:
ssck03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SPSK_00396
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
SPSK_00396
microRNA pathway
RISC loading complex
SPSK_00396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoL2
PAZ
ArgoL1
ArgoMid
HNH_2
Motif
Other DBs
NCBI-GeneID:
27662642
NCBI-ProteinID:
XP_016582621
UniProt:
A0A0F2LTX2
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MTGRPPQQGGPPPGGQRRLSQGSQSGGPPRGMAHQRGTSQSSQQGRPPNLDVSQQIPSGS
PGPSSPRGAPNPFGPGLGFDPARNKIEEAKRREKVVPNRMDLPPEAYSMARLFPVSLLFS
PASDGKKPLFAARPGYNEKDKPLNIRVNQYRVEQTNSVTVYQYAVSLVPEPPKAIVYKKC
WASHAVQKQLERQPQVWLYDGRSLAWSICNQPGPVKIAIDLDAEAGKTTRPGHPNQYIML
IRQTSAIYLDSLMSYLRGKSGWDTHILECMNFFDHALRQKPSQSMTAIRRNFYHPQSPKR
DLDGTIYAAKGIYAAFRLSESVRTGGSGLGINVDVANTTFWKDQTLDKLVMNLINISSDK
WNVRTATEAAQLLRPIQWHLNTKLKEPTMSDAFKVMRRLHKLRFKVFHRGKTNDSKIYTI
ARFAWHQRFMFEGATSETYTFTLRKTGETRTVYDHYLKQYDVPLQYPKYPVIETTRDGAF
PLEVCHILPWQRYNFKLNGQQTSDMIKFAVTRPAERAKSIMENVKRLGWDSDEYLREFGI
RVNPDMSKVQARLLKPPVVSYKNGNATPGTSGRWDLRSKLFYINNKGRELRSWGVAVVDN
CMDFPAVQNFIRVFTKTFKDHGGLVEKNPHLMKFPRGKDLGDAYQEAYDATTNANGGEDP
VIMFWILPSKNSFPYYRLKKNGECRYGMVSQMLNAAHVAKAQPQYCSNVSMKVNAKLGGT
TCRVPAEGGSPSAPAFFNQPTMIIGLDVSHGSTNMKGELEPSMAAMAVSWDKDAAKYSAF
CQTNGYRQEIVNPVRMTSMFEKALRKWTETLNCKMPAHVFYFRDGVSEGQFIQVMDFEVA
QLKEIFQKRCGRVPKFTVIVATKRHHIRFFPEPSSADRNGNPLPGTLVEKEVTHPFHYDF
YLCSHTAIQGTARPVHYHVIHDEVKMPPHLLQKMIYQQCYQYARSTTPVSLHPAVYYAHI
AGDRARAHENVESDRKDPELIKKSVENWTAKKSSGSITHPTESLPLLPFGAKESHEKNRN
FTPWTMWFI
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtcgtcctccgcaacagggcggaccgccacccggtggccaacgccgcctctcg
cagggttcccagagcggtggacctcctcgcgggatggctcaccaacgtggcacgtcgcag
tcttcccaacaggggcgcccccccaacctagatgtttcccagcaaatcccgtcgggctcg
cctggtccgtctagcccccgaggggcgccgaacccgtttggacccggtttgggttttgat
cccgcccgcaacaagatagaagaagcgaagcgccgggaaaaggtagttcccaaccggatg
gacctgccgcctgaggcgtacagcatggcacgtttatttcctgtttcccttcttttttct
cctgcctcagatggcaagaagccactctttgctgcccgcccgggctacaacgagaaggac
aagcctctcaacattcgggtgaaccaataccgagtggaacagaccaacagtgtcactgtg
taccaatacgctgtgtcgctggttcctgagccacccaaggccatcgtctacaagaagtgc
tgggcgtctcatgctgtccaaaagcaactcgagcgacagccccaggtctggctctacgac
gggcgaagcttggcctggtctatctgcaaccagcctggccccgtcaagattgcgattgac
ctggatgccgaggccggcaagacaacccgcccggggcatcctaatcagtatatcatgctg
attaggcagacaagtgccatctacctggacagtctgatgtcgtacttgcgtgggaagagc
gggtgggatactcacatcttggagtgcatgaactttttcgatcacgccctccgtcagaag
ccgtcgcagtctatgactgctatccgtcgtaatttttatcacccgcagtcgccgaagcgc
gatctcgatggcaccatctatgccgcaaagggcatttacgcagcgttccggctctctgag
tcggttcgcacgggtggcagcggtctcggtattaacgtggacgttgccaacaccacgttt
tggaaggatcaaactcttgacaagcttgtcatgaacctgatcaacatttccagcgacaag
tggaacgttcgcactgccacagaggccgcgcagcttttgcggcccatccagtggcacctg
aacaccaagctcaaagagccgaccatgtccgacgccttcaaggtcatgcgtcgcctccac
aagctgcgcttcaaggtctttcaccggggcaagactaacgactctaagatttacacaatc
gcccgatttgcctggcaccagagattcatgtttgagggtgcgacgtctgagacctacacg
ttcacgcttcgtaaaactggagagactcggacagtctacgaccactatctcaaacaatac
gacgtcccacttcagtacccgaagtacccagtcattgaaacaacacgtgacggggcgttt
cctctcgaagtctgccatatcctgccctggcagcgctacaacttcaagctgaatgggcag
cagacgtccgacatgatcaagttcgctgttacgcggcccgctgagcgtgccaaaagcatc
atggaaaacgtgaagcgacttggttgggactctgacgagtatctgcgcgagtttggcatc
cgtgtcaaccccgacatgtccaaggtgcaggcccgcctcctcaagccgcctgttgtgagc
tacaagaacggcaacgccacccctggcacaagcggacggtgggatctccgttcgaaactg
ttctacatcaacaacaaaggccgggagttgcgttcgtggggagttgctgtggtggacaat
tgtatggactttccagccgttcagaacttcatccgcgtctttaccaagaccttcaaggat
cacggtggccttgtcgagaagaacccacacttgatgaaatttccccgcggcaaagatctg
ggtgacgcgtaccaagaggcgtacgatgccacgacaaatgccaacggcggagaggatccg
gtcatcatgttttggattctgccttccaaaaactcctttccgtattaccgcttgaagaaa
aacggcgagtgtcgctacggcatggtttctcagatgctgaatgcagcgcatgttgccaaa
gcccagccccagtactgttccaatgtttcgatgaaggtcaacgccaagctcggtggtacc
acctgccgcgttccggcagagggcggatctccttctgcgccggcatttttcaaccagcct
accatgatcattggtcttgatgtgtcgcacggctcaaccaacatgaaaggcgagctggag
ccctccatggccgccatggccgtgtcgtgggacaaggacgccgccaagtactcggcattt
tgtcagaccaatggctaccgccaagagattgtgaatccagttcggatgaccagcatgttt
gaaaaggcacttcggaagtggaccgaaacgctcaactgcaagatgcctgcacatgtgttc
tacttccgtgacggtgtcagcgaggggcagtttatacaagtgatggactttgaagttgcc
caattaaaggaaatcttccagaagcgttgtggtcgcgtgccgaagttcaccgttattgtg
gccacgaagcgtcaccacatccgcttcttcccagagcccagctctgccgaccgcaatggc
aacccactgcctggtaccctggtggaaaaggaagtgacccaccctttccactacgacttc
tacctatgctcgcacactgccatccaaggcactgcacgcccagttcattaccacgttatc
cacgacgaggtcaagatgccaccccatcttttgcaaaaaatgatctaccagcagtgctac
cagtatgcgcgctcgacaaccccggtgtctctacacccggcggtttactatgctcatata
gctggtgaccgtgctcgggctcatgaaaacgttgaatcggatcgcaaggacccggagctc
atcaagaaatcggtggagaactggacggcgaagaagtcctcgggaagcatcacgcatccg
acggagtctcttccacttctgccattcggtgccaaggagtcccatgagaagaatcgcaac
ttcacgccgtggacgatgtggttcatctaa
DBGET
integrated database retrieval system
