Sporothrix schenckii: SPSK_00815
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Entry
SPSK_00815 CDS
T05555
Name
(RefSeq) transcription initiation factor TFIIF subunit beta
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ssck
Sporothrix schenckii
Pathway
ssck03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPSK_00815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_00815
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
SPSK_00815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
UPF0561
Motif
Other DBs
NCBI-GeneID:
27663039
NCBI-ProteinID:
XP_016584335
UniProt:
A0A0F2LXU6
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MADDATVKQEVSSLPIKMDVDADDGGLASIPAIGGGEDDIYEDAGDLEFYDATQPGDPFG
NMYLVRVPPYVWEAWDKLDDDAEIEIATVRQWTEVDKKTGEPRYRMRMLLRSDLGSHQAI
PKEYELDLPMVDTAGNRNAAGSGTGGAQNTQIKNTYLFSEQDLPGFKAKNKERAQAAAAG
IPAHLLRQKNNDRVEKPGGQPNQNHGGRHHYRRHQPRQEFFRKAIPKKTTVAGRVRHELN
CAPVKNAESDLILNERARAAMIPKAQVKFGDASKPEFRIIGSGGIASQNYATDFIKTAQP
PPKVKKVEAKTARMPENDLLDLIFNCFARFRFWSMRALRAEIPQPEIYLRHTLEKVADLH
RSGRFANNWELKAENRKDGSATAEVKASEYVAETADTDTDGEEEDIKLEDVVPPTA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacgcgacagtaaaacaggaggtgtcctccctcccgatcaagatggacgtc
gatgccgacgacggcggcctggccagcatccctgcgattggcggtggcgaggacgacatt
tacgaagacgccggcgacctcgagttctatgacgcgacacagcccggcgacccgtttggc
aacatgtacctggtgcgcgtgccgccctacgtatgggaggcgtgggacaagctggacgac
gacgccgagattgagattgcgacggtgcggcagtggaccgaggtcgacaagaagacgggc
gagcccaggtaccggatgcgcatgctgctgcgcagcgacctgggcagccaccaggccatc
cccaaggagtacgagctggacctgcccatggtggacacggcgggcaaccgcaacgcggcc
ggcagcgggaccggcggcgcacaaaacacacagatcaagaacacctacctgttcagcgaa
caggacctgcccggcttcaaggccaagaacaaggaacgcgcccaggcggccgcggccggc
atcccggcgcacctgctgcgccagaagaacaacgaccgcgtcgagaagcccggggggcag
ccgaaccagaaccacggcggccggcaccactaccggcgccaccagccgcgccaagaattc
ttccgcaaagccatccccaaaaagacgactgtggccggccgcgtgcggcacgagctcaac
tgcgcacccgtcaagaacgccgagtccgacctgatcttgaacgagcgcgcgcgcgccgcc
atgatccccaaggcccaggtcaagttcggcgacgcgtccaagcccgagttccgcatcatc
ggcagcggcggcattgcctcgcaaaactatgcgaccgattttatcaagacggcgcagccg
ccgcccaaggtcaaaaaggtcgaggccaagacggcgcgcatgcccgaaaacgacctgctg
gacctcatcttcaactgcttcgcgcgcttccggttctggtcgatgcgcgcgctgcgcgcc
gagatcccgcagccggaaatctacctgcggcacacgctcgaaaaggtcgccgacctgcac
cgcagcggccgcttcgccaacaactgggagctcaaggcagagaaccgcaaggacggttcc
gctaccgccgaggtcaaggcgtctgaatacgtcgccgagacggccgacaccgacacggac
ggcgaggaggaggacatcaagctggaggatgtggtgccgccgacggcataa
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