KEGG   Sporothrix schenckii: SPSK_00983
Entry
SPSK_00983        CDS       T05555                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ssck  Sporothrix schenckii
Pathway
ssck03440  Homologous recombination
ssck03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SPSK_00983
   03450 Non-homologous end-joining
    SPSK_00983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssck03032]
    SPSK_00983
   03400 DNA repair and recombination proteins [BR:ssck03400]
    SPSK_00983
DNA replication proteins [BR:ssck03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    SPSK_00983
DNA repair and recombination proteins [BR:ssck03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     SPSK_00983
    BRCA1-C complex
     SPSK_00983
   NHEJ (non-homologous end-joining)
    MRX complex
     SPSK_00983
SSDB
Motif
Pfam: AAA_23 AAA_21 SbcC_Walker_B SMC_N AAA_15 AAA_29 AAA_13 AAA_22 ABC_tran AAA_16
Other DBs
NCBI-GeneID: 27663192
NCBI-ProteinID: XP_016583998
UniProt: A0A0F2LV34
LinkDB
Position
Unknown
AA seq 1355 aa
MLTHILSGVRSYTPRCSTSQLSTIVANIQASTPSEDREARNPGPFSIRSFSPASQESMLF
NTPLTLIVGYNGSGKTTIIETLKYATTGEQPPNSKGGAFIHDPKLCGEKEVLAQVRLSFQ
STVGQKLVVTRSLQLTMKKTQRSMKTLDGSLVIYNNGERTGLSTKVGELDELVPNYLGVS
SAILDAVIFCHQDESLWPMSEPAALKKRFDEIFEAMKYTKAIDNLKVVRKKQGEELQKLK
MLEATNKEAKEKGQRAEKHLASLQAQIEDLREQGEDLTRQMDDVQAAAKERREQATSFFG
IVQELKSKQDQFEVRSETMAELKESIVKMRTESDAWLDEHLQQYEATLARLQNDKEEQTT
RFRQLQAGLTTSRNALGAQQAEQGKHQSDKEKYERQLQTRIDMIHEAAARHEIRGFESDD
LRDSHIRTFRERIQKLLQDKRRDLERLQRENAKELEKDTAVISGLETRKATRTQDRVAAK
QRIAVIDKRMAVLQRDIQKLDVDEGAQAILESTYADLEARLKRATDDAHAAGIDGQIEQE
NNQIWQLENESEKLGREMVECMRRASDRAQLDLRKKEAVERKRRLDTLTSTWRGKLGAIV
GQGWTAESVDADFQSVLQGLVTTAGDARKQVDASQQELKQVEYKLSTIRDRQKKTVAQSA
TCQATVLEVLRAVKAGGEEGASAAESVSIEEYQEELDNLESEILTAEKDISLFDHLKDYY
SKSQKVLNRFNKCSHCDRSFADQPRERSKLLEKIAKNLDDKQKKELEQEKDMLEQNLGQL
RAVRTQYETYTRLESELPGLRDELKAAEGQRDALVRRLEDQDASFKEADEKRMDVESMAK
TVASISQAVKDVAASDEQIEKLASQQQSAGSSRSSEEIQELQATCADQLRAAKQRLAKLS
DDRQRMRDAVSTLELERSELKNKIAHAARQVERKADLVNQIQAFKDESTQQRELIQQTDR
DLEALEPEIAKARTIRQDTVQRGQDKERVGAQERDAVAHTVSELRMVEKDIDDYVDRGGP
AQLLTNVRAIATLEQAIAGQEREADELAAQVNKMKAEIDNSDREKKNIADNLSYRRNSRL
LNELQRDIRDLEARNAEDDYDRLVGEAKRFEVQHSKLLAERSAIWGSMKTKDEELLRLLD
EYEQEYKEAEFRYRESHIRVETTKAAIDDLGRYSAALDKAIMEYHGLKMEEVNRIAGELW
RATYQGTDIDTILIRSDNETATGKRNYNYRVCMVKQDTEMDMRGRCSAGQKVLASIIIRL
ALAESFGVNCGLIALDEPTTNLDSDNIRSLAVALHAIIKARQAQANFQLIVITHDEEFLR
HMRCSDFCYTFYRVSRDDRQNSVITREPITRLMEG
NT seq 4068 nt   +upstreamnt  +downstreamnt
atgctgacacatatcctctcaggtgtgcgttcctatactccacgctgttcgacttcgcag
ctatccacgattgtggctaacatccaggcgtcgacccctagcgaagatcgagaagctcgg
aatccggggcccttcagcatccggtccttcagtccggccagccaagagtctatgctgttt
aacacgccgctgactctgattgtcggctacaacggttctggaaagacgaccatcatcgag
actctcaagtatgccaccaccggcgaacagccgccgaatagcaaaggcggcgcctttatc
cacgatcccaagttatgcggcgaaaaagaggtcctggcacaggtccgcctgtccttccag
tctaccgtcgggcagaaactggttgtcacccgcagcctgcaactcaccatgaaaaagacg
cagcgctccatgaagacgctcgacggctcgctcgtcatctacaacaacggcgagcgcacc
ggcctctccaccaaagtcggcgaactcgacgaactcgtgcccaactacctcggcgtctcg
tccgccatcctcgacgccgtcatattttgccaccaggacgagtcgctctggcccatgagc
gaaccggccgcactgaagaagcgctttgatgagattttcgaggccatgaagtacaccaag
gccatcgacaacctcaaggtcgtccggaagaagcagggcgaggagctgcagaagctcaag
atgctcgaggccacaaacaaggaggccaaagaaaagggccagcgtgccgagaagcacctg
gcctccctccaagcccagatcgaggacctacgcgaacagggcgaggacttgactcggcag
atggacgacgtgcaggcggccgccaaagagcgccgcgaacaggccacgtccttctttggc
attgtgcaggagctcaagagcaagcaggaccagttcgaggtgcgcagcgagaccatggcc
gagctcaaggagagcatcgtcaaaatgcgcaccgagtcggacgcgtggctcgacgagcac
cttcagcagtacgaggcgaccctggcgcgcctccaaaacgacaaggaggaacagacgact
cggttccgccagttgcaggccggcctcacaacctcgcgcaatgcgctcggcgcccagcag
gccgagcagggcaagcaccagtcggacaaggaaaagtacgagcggcagctgcagacccgc
atcgacatgatccacgaggccgccgcgcgccacgaaatccgcggcttcgagagcgacgac
ctgcgcgacagccacattcggacgttccgggagcgcatccagaagctgttgcaggacaag
cggcgcgatctggagcgactgcagcgggagaacgccaaggagctggaaaaggacacggcc
gtcatcagcgggctggaaacgcgaaaggccacccgcacacaggaccgcgtcgcggccaag
cagcgcattgccgtcattgacaagcgcatggccgtcctgcagcgcgacatccagaaactg
gacgtcgatgagggtgcccaggcgatcctcgaatcgacgtacgccgacctggaggcccgc
ctgaagcgggccacagacgacgcgcacgcggccggcatcgacgggcagattgagcaggag
aacaaccagatctggcagctcgagaacgagagcgaaaagctgggccgcgagatggtcgag
tgtatgcggcgcgcgtcggaccgggcccagctcgacctgcggaaaaaggaggccgtcgag
cgcaaacgccgcttggacactctgacatcgacgtggcgcggcaaactcggtgccattgtc
ggccaggggtggaccgccgagtccgtggatgccgacttccaatcggtcctccagggcctc
gtcacaacggccggcgacgcgcgcaaacaggtcgacgccagccagcaggagctgaagcag
gtcgagtacaagctgtccacgatccgcgatcggcaaaagaagacggtcgcgcagtcggcc
acgtgccaggcgaccgtgctcgaggtgctccgggcggtcaaggccggcggcgaggagggt
gccagcgccgcggaatccgtgtcgatcgaagagtaccaagaagagctggacaatctggag
tcggagattctcacggccgagaaggacattagtctgtttgatcatttgaaggactactat
tccaagtcccaaaaggtcctgaaccgctttaacaagtgctcgcattgcgaccggtcgttt
gccgaccagccgcgggagcgctccaagctgcttgaaaagattgccaagaacctcgacgac
aagcagaagaaggagctggagcaggaaaaggacatgctcgaacaaaacctgggccagctg
cgcgccgtccgcacacagtacgagacctatacacgcctcgagtcggagctgcccggcctg
cgggacgagctcaaggcggccgaggggcagcgcgatgccctggtgcgccggctcgaggac
caggacgcctcgttcaaggaggccgacgagaaacggatggacgtcgagtcgatggccaag
acggtggcaagcatctcgcaggcggtcaaggacgttgccgcgtcggacgagcaaattgag
aagctagcctcgcagcagcagtcggcgggctcgtcccgcagctccgaggagatccaggaa
ttgcaggccacctgcgccgaccagctgcgtgcggccaaacagcgcctcgccaagctgtcc
gacgaccggcagcgcatgcgggatgccgtcagcacgctggagctggagcggagcgagctg
aagaacaagattgcgcacgcagcgcggcaggtcgagcggaaagcggacctcgtcaaccag
atccaggcgttcaaggacgagtcgacgcagcagcgcgaactgatccagcagacggaccgc
gacctcgaggccctcgagcccgagatcgccaaggcgcgcaccatccggcaggacaccgtg
cagcgggggcaagacaaggagcgcgtgggagcccaggagcgcgatgcggtggcgcacacg
gtgagcgagctccggatggtcgagaaggacattgacgactacgtcgaccgcggggggccg
gcgcagcttctgaccaatgtgcgcgccattgcgacgctggagcaggccattgctggccag
gagcgtgaggcggacgagctggcggcacaggtcaacaagatgaaggcggagattgacaac
agcgaccgcgaaaagaagaacattgcggacaacctgagctaccggcgcaactcgcggctg
ctgaacgagctgcagcgcgacattcgggacctggaggcgcgcaatgccgaggacgactac
gaccggctggtgggggaggccaagcggttcgaggtgcagcacagcaagctgctggcggag
cgcagcgcgatctggggcagcatgaagacaaaggacgaggagctgctgcggctgctggac
gagtacgaacaggagtacaaggaggccgagttccgctaccgcgagtcgcacatccgcgtc
gagacgaccaaggcggcgattgacgacctgggccgctactcggcggcgctcgacaaggcc
attatggagtaccacggcctcaagatggaggaggtcaaccgcatcgcgggcgagctgtgg
cgcgcgacgtaccagggcaccgacattgacacgatcctgatccggtccgacaacgagacg
gcgacgggcaagcgcaactacaactaccgcgtgtgcatggtcaagcaggacacggagatg
gacatgcgcgggcggtgctcggcgggccaaaaggtgctggcgagcatcatcatccggctg
gcgctggccgagtcgtttggcgtcaactgcgggctgattgcgctggacgagccgacgacg
aacctggacagcgacaacatccggtcgctggcggtggcgctgcacgccatcatcaaggcg
cggcaggcacaggccaacttccagctgattgtgattacgcacgacgaggagttcctgcgg
cacatgcgctgctcggacttttgctacaccttctaccgcgtgtcgcgcgatgaccggcaa
aacagcgtcattacgcgggagcccattacgcggttgatggagggatag

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