Sporothrix schenckii: SPSK_00983
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Entry
SPSK_00983 CDS
T05555
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ssck
Sporothrix schenckii
Pathway
ssck03440
Homologous recombination
ssck03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPSK_00983
03450 Non-homologous end-joining
SPSK_00983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssck03032
]
SPSK_00983
03400 DNA repair and recombination proteins [BR:
ssck03400
]
SPSK_00983
DNA replication proteins [BR:
ssck03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
SPSK_00983
DNA repair and recombination proteins [BR:
ssck03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
SPSK_00983
BRCA1-C complex
SPSK_00983
NHEJ (non-homologous end-joining)
MRX complex
SPSK_00983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
AAA_29
AAA_13
AAA_22
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
27663192
NCBI-ProteinID:
XP_016583998
UniProt:
A0A0F2LV34
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MLTHILSGVRSYTPRCSTSQLSTIVANIQASTPSEDREARNPGPFSIRSFSPASQESMLF
NTPLTLIVGYNGSGKTTIIETLKYATTGEQPPNSKGGAFIHDPKLCGEKEVLAQVRLSFQ
STVGQKLVVTRSLQLTMKKTQRSMKTLDGSLVIYNNGERTGLSTKVGELDELVPNYLGVS
SAILDAVIFCHQDESLWPMSEPAALKKRFDEIFEAMKYTKAIDNLKVVRKKQGEELQKLK
MLEATNKEAKEKGQRAEKHLASLQAQIEDLREQGEDLTRQMDDVQAAAKERREQATSFFG
IVQELKSKQDQFEVRSETMAELKESIVKMRTESDAWLDEHLQQYEATLARLQNDKEEQTT
RFRQLQAGLTTSRNALGAQQAEQGKHQSDKEKYERQLQTRIDMIHEAAARHEIRGFESDD
LRDSHIRTFRERIQKLLQDKRRDLERLQRENAKELEKDTAVISGLETRKATRTQDRVAAK
QRIAVIDKRMAVLQRDIQKLDVDEGAQAILESTYADLEARLKRATDDAHAAGIDGQIEQE
NNQIWQLENESEKLGREMVECMRRASDRAQLDLRKKEAVERKRRLDTLTSTWRGKLGAIV
GQGWTAESVDADFQSVLQGLVTTAGDARKQVDASQQELKQVEYKLSTIRDRQKKTVAQSA
TCQATVLEVLRAVKAGGEEGASAAESVSIEEYQEELDNLESEILTAEKDISLFDHLKDYY
SKSQKVLNRFNKCSHCDRSFADQPRERSKLLEKIAKNLDDKQKKELEQEKDMLEQNLGQL
RAVRTQYETYTRLESELPGLRDELKAAEGQRDALVRRLEDQDASFKEADEKRMDVESMAK
TVASISQAVKDVAASDEQIEKLASQQQSAGSSRSSEEIQELQATCADQLRAAKQRLAKLS
DDRQRMRDAVSTLELERSELKNKIAHAARQVERKADLVNQIQAFKDESTQQRELIQQTDR
DLEALEPEIAKARTIRQDTVQRGQDKERVGAQERDAVAHTVSELRMVEKDIDDYVDRGGP
AQLLTNVRAIATLEQAIAGQEREADELAAQVNKMKAEIDNSDREKKNIADNLSYRRNSRL
LNELQRDIRDLEARNAEDDYDRLVGEAKRFEVQHSKLLAERSAIWGSMKTKDEELLRLLD
EYEQEYKEAEFRYRESHIRVETTKAAIDDLGRYSAALDKAIMEYHGLKMEEVNRIAGELW
RATYQGTDIDTILIRSDNETATGKRNYNYRVCMVKQDTEMDMRGRCSAGQKVLASIIIRL
ALAESFGVNCGLIALDEPTTNLDSDNIRSLAVALHAIIKARQAQANFQLIVITHDEEFLR
HMRCSDFCYTFYRVSRDDRQNSVITREPITRLMEG
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgctgacacatatcctctcaggtgtgcgttcctatactccacgctgttcgacttcgcag
ctatccacgattgtggctaacatccaggcgtcgacccctagcgaagatcgagaagctcgg
aatccggggcccttcagcatccggtccttcagtccggccagccaagagtctatgctgttt
aacacgccgctgactctgattgtcggctacaacggttctggaaagacgaccatcatcgag
actctcaagtatgccaccaccggcgaacagccgccgaatagcaaaggcggcgcctttatc
cacgatcccaagttatgcggcgaaaaagaggtcctggcacaggtccgcctgtccttccag
tctaccgtcgggcagaaactggttgtcacccgcagcctgcaactcaccatgaaaaagacg
cagcgctccatgaagacgctcgacggctcgctcgtcatctacaacaacggcgagcgcacc
ggcctctccaccaaagtcggcgaactcgacgaactcgtgcccaactacctcggcgtctcg
tccgccatcctcgacgccgtcatattttgccaccaggacgagtcgctctggcccatgagc
gaaccggccgcactgaagaagcgctttgatgagattttcgaggccatgaagtacaccaag
gccatcgacaacctcaaggtcgtccggaagaagcagggcgaggagctgcagaagctcaag
atgctcgaggccacaaacaaggaggccaaagaaaagggccagcgtgccgagaagcacctg
gcctccctccaagcccagatcgaggacctacgcgaacagggcgaggacttgactcggcag
atggacgacgtgcaggcggccgccaaagagcgccgcgaacaggccacgtccttctttggc
attgtgcaggagctcaagagcaagcaggaccagttcgaggtgcgcagcgagaccatggcc
gagctcaaggagagcatcgtcaaaatgcgcaccgagtcggacgcgtggctcgacgagcac
cttcagcagtacgaggcgaccctggcgcgcctccaaaacgacaaggaggaacagacgact
cggttccgccagttgcaggccggcctcacaacctcgcgcaatgcgctcggcgcccagcag
gccgagcagggcaagcaccagtcggacaaggaaaagtacgagcggcagctgcagacccgc
atcgacatgatccacgaggccgccgcgcgccacgaaatccgcggcttcgagagcgacgac
ctgcgcgacagccacattcggacgttccgggagcgcatccagaagctgttgcaggacaag
cggcgcgatctggagcgactgcagcgggagaacgccaaggagctggaaaaggacacggcc
gtcatcagcgggctggaaacgcgaaaggccacccgcacacaggaccgcgtcgcggccaag
cagcgcattgccgtcattgacaagcgcatggccgtcctgcagcgcgacatccagaaactg
gacgtcgatgagggtgcccaggcgatcctcgaatcgacgtacgccgacctggaggcccgc
ctgaagcgggccacagacgacgcgcacgcggccggcatcgacgggcagattgagcaggag
aacaaccagatctggcagctcgagaacgagagcgaaaagctgggccgcgagatggtcgag
tgtatgcggcgcgcgtcggaccgggcccagctcgacctgcggaaaaaggaggccgtcgag
cgcaaacgccgcttggacactctgacatcgacgtggcgcggcaaactcggtgccattgtc
ggccaggggtggaccgccgagtccgtggatgccgacttccaatcggtcctccagggcctc
gtcacaacggccggcgacgcgcgcaaacaggtcgacgccagccagcaggagctgaagcag
gtcgagtacaagctgtccacgatccgcgatcggcaaaagaagacggtcgcgcagtcggcc
acgtgccaggcgaccgtgctcgaggtgctccgggcggtcaaggccggcggcgaggagggt
gccagcgccgcggaatccgtgtcgatcgaagagtaccaagaagagctggacaatctggag
tcggagattctcacggccgagaaggacattagtctgtttgatcatttgaaggactactat
tccaagtcccaaaaggtcctgaaccgctttaacaagtgctcgcattgcgaccggtcgttt
gccgaccagccgcgggagcgctccaagctgcttgaaaagattgccaagaacctcgacgac
aagcagaagaaggagctggagcaggaaaaggacatgctcgaacaaaacctgggccagctg
cgcgccgtccgcacacagtacgagacctatacacgcctcgagtcggagctgcccggcctg
cgggacgagctcaaggcggccgaggggcagcgcgatgccctggtgcgccggctcgaggac
caggacgcctcgttcaaggaggccgacgagaaacggatggacgtcgagtcgatggccaag
acggtggcaagcatctcgcaggcggtcaaggacgttgccgcgtcggacgagcaaattgag
aagctagcctcgcagcagcagtcggcgggctcgtcccgcagctccgaggagatccaggaa
ttgcaggccacctgcgccgaccagctgcgtgcggccaaacagcgcctcgccaagctgtcc
gacgaccggcagcgcatgcgggatgccgtcagcacgctggagctggagcggagcgagctg
aagaacaagattgcgcacgcagcgcggcaggtcgagcggaaagcggacctcgtcaaccag
atccaggcgttcaaggacgagtcgacgcagcagcgcgaactgatccagcagacggaccgc
gacctcgaggccctcgagcccgagatcgccaaggcgcgcaccatccggcaggacaccgtg
cagcgggggcaagacaaggagcgcgtgggagcccaggagcgcgatgcggtggcgcacacg
gtgagcgagctccggatggtcgagaaggacattgacgactacgtcgaccgcggggggccg
gcgcagcttctgaccaatgtgcgcgccattgcgacgctggagcaggccattgctggccag
gagcgtgaggcggacgagctggcggcacaggtcaacaagatgaaggcggagattgacaac
agcgaccgcgaaaagaagaacattgcggacaacctgagctaccggcgcaactcgcggctg
ctgaacgagctgcagcgcgacattcgggacctggaggcgcgcaatgccgaggacgactac
gaccggctggtgggggaggccaagcggttcgaggtgcagcacagcaagctgctggcggag
cgcagcgcgatctggggcagcatgaagacaaaggacgaggagctgctgcggctgctggac
gagtacgaacaggagtacaaggaggccgagttccgctaccgcgagtcgcacatccgcgtc
gagacgaccaaggcggcgattgacgacctgggccgctactcggcggcgctcgacaaggcc
attatggagtaccacggcctcaagatggaggaggtcaaccgcatcgcgggcgagctgtgg
cgcgcgacgtaccagggcaccgacattgacacgatcctgatccggtccgacaacgagacg
gcgacgggcaagcgcaactacaactaccgcgtgtgcatggtcaagcaggacacggagatg
gacatgcgcgggcggtgctcggcgggccaaaaggtgctggcgagcatcatcatccggctg
gcgctggccgagtcgtttggcgtcaactgcgggctgattgcgctggacgagccgacgacg
aacctggacagcgacaacatccggtcgctggcggtggcgctgcacgccatcatcaaggcg
cggcaggcacaggccaacttccagctgattgtgattacgcacgacgaggagttcctgcgg
cacatgcgctgctcggacttttgctacaccttctaccgcgtgtcgcgcgatgaccggcaa
aacagcgtcattacgcgggagcccattacgcggttgatggagggatag
DBGET
integrated database retrieval system