Sporothrix schenckii: SPSK_01033
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Entry
SPSK_01033 CDS
T05555
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ssck
Sporothrix schenckii
Pathway
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_01033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssck03041
]
SPSK_01033
03009 Ribosome biogenesis [BR:
ssck03009
]
SPSK_01033
Enzymes [BR:
ssck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPSK_01033
Spliceosome [BR:
ssck03041
]
Complex A
U2 snRNP components
U2 related factors
SPSK_01033
Complex B
SPSK_01033
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
SPSK_01033
Ribosome biogenesis [BR:
ssck03009
]
Eukaryotic type
90S particles
Helicases
SPSK_01033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
AAA_19
PTPlike_phytase
SRP54
T2SSE
NeuB
AAA_23
nSTAND3
Motif
Other DBs
NCBI-GeneID:
27663241
NCBI-ProteinID:
XP_016583965
UniProt:
A0A0F2LWS3
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MSSLDKPSSSSLSKKRHAPDSDTDSYTAELPSMKRNKGENGERPEKSKTPKVDSDSDASS
AKKPAKNPYLAHLEDEGSNGNDGDEFDQDKGKQPLYSSDDNGFAGMTRHQTTAEQVSRVE
HEEYNAFTGRRHTQQYFRILETRKGLPVHKQRQEFLDMYHSTQILVFVGETGSGKTTQIP
QYILYDDMPQLNRKMVACTQPRRVAAMSVAQRVADELDVKLGEEVGYSIRFENCTGPKTL
LKYMTDGQLLRESMNDPDLSRYSCIMIDEAHERTLATDILMALLKGLALRRSDLKIVIMS
ATLDAQKFQRYFHNAPLLAVPGRTHPVEIFYTPEPEKDYVEAAVRTVLQIHATEPEGDIL
LFLTGEDEIEDACRRINLETDEMIRESDAGPMTVYPLYGSLPPHQQQKIFDKAPEAFKKG
GRPGRKCIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVTPISRASAKQRA
GRAGRTRPGKCFRLYTEKAFKQDLIEQTYPEVLRSNLSNTILELKKLGVDDLVHFDFMDP
PPPETMMRALEELNYLACLDDEGELTQLGNLASDFPLDPSLAVMLITSPEFYCSNEILSI
VSLLSVPQLFLRPAAARKRADDAKAQFTHPDSDHLTLLNVYHAFKGEELKGTTDMRKWCH
EWFLSYRHLSTADDVRTQLKSYMESHGIELVSTPWGDRDYYTNIRRALVSGFFMQVAHRQ
ATGKIYRTIKDNQPVIIHPSTGLSTDFEWVVYNEFVLTSKQYIRTVTGVKPEWLLDIAPN
YYDLSSFDEGEAKIALKRVADKIKRREAVRSA
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcctcgacaaaccttcctcctcctcactcagcaaaaagcgtcacgcccccgac
tccgacaccgactcctacaccgccgagctgccctcaatgaagcgcaacaagggcgagaac
ggcgagcggccggagaagagcaagacgcccaaggtcgactcagacagcgatgcctcatcc
gcgaagaagcccgccaagaatccgtacctggcgcacctcgaggacgagggcagcaacggc
aacgatggcgacgagtttgaccaggacaagggcaagcagcctctgtacagcagcgacgat
aacggcttcgccggcatgacgcgccaccagacgacggccgagcaggtctcgcgggttgag
cacgaagagtacaacgcattcacgggccgccggcacacgcagcagtacttccgcatcctc
gagacgcgcaagggcctgccggtgcacaagcagcgccaggagtttttggacatgtaccac
agcacgcagattctcgtgtttgtcggcgagacgggttcgggcaagacgacccagattccc
cagtacattctctacgatgatatgccgcagctgaaccgcaagatggttgcgtgcacacag
ccgcggcgagtcgccgccatgtccgtcgcacagcgtgtggccgatgagctggacgtcaag
ctcggcgaagaagtcggctacagcatccgtttcgagaactgcacagggcccaagacgctg
ctcaagtacatgaccgatggtcagctgctgcgcgagtccatgaacgacccggacctgtcg
cgctacagctgcatcatgatcgacgaggcgcacgagcgcacgctggccaccgacattctg
atggcgctgctcaagggcctggcgctccgccggtcggacctcaagattgtcatcatgtcc
gcgaccctcgacgcgcaaaagttccagcgctatttccacaacgcaccactcctggccgtg
cccggtcgtacgcacccggtcgagatcttctacacgcccgagcccgagaaggactacgtc
gaggcggccgtgcgcacggtgctgcagatccacgcgaccgagcccgagggcgacatcttg
ctcttcctcacaggcgaggacgagattgaggacgcgtgccgacgcatcaacctcgagacg
gacgagatgatccgcgagtcggacgcgggtcccatgacggtgtaccccttgtatggctcg
cttccaccgcaccagcagcaaaagatatttgacaaggcacccgaagcgttcaagaagggc
ggccggccgggccgcaagtgcatcgtgtcgaccaacattgccgagacgagtttgacgatt
gacggcattgtgtacgtggtggatccgggcttcagcaaacaaaaaatctacaacccgcgg
atccgcgtcgagtcgctgctcgtgacccctatctcgcgcgcatcggccaagcagcgcgcg
ggtcgtgccggtcgtacgcggcctggcaagtgcttccggctgtacacggagaaggcgttc
aagcaggacctcattgagcagacataccccgaggtgctgcggtcgaacctgagcaacacc
attctggagctgaagaagctgggcgtggacgacctggtgcactttgactttatggacccg
ccaccgccagagaccatgatgcgcgcgctcgaggagctcaactacttggcgtgcctggac
gacgaaggcgagctgacgcagctcggcaacttggcgagcgacttcccgctggacccgtcg
ctggccgtgatgctaatcacatcgcccgagttctactgctccaacgagattttgtcaatt
gtatcgttgctgtcggtgccgcagctgtttttgcgaccggccgcggcgcgtaagcgggca
gacgacgctaaggcgcagttcacacatccggacagcgaccacctgacgctcctcaacgtg
taccacgccttcaagggcgaggagctcaagggcacgacggacatgcgcaagtggtgccac
gagtggttcttgtcctaccggcacctgtcgacggcggacgacgtgcggacgcagctcaag
tcgtacatggagtcgcacggcatcgagctggtgagcacgccgtggggagacagggactac
tacaccaacatccggcgggcgctggtgtcgggctttttcatgcaggtggcgcaccggcag
gcgacgggcaagatctatcgcacgatcaaggacaaccagccggtgatcatccacccgagc
acgggcttgtcgacagatttcgagtgggtggtgtacaacgagtttgtgcttacgagcaag
cagtacatccggacggttacgggcgtcaagccggagtggctgctggacattgcgcccaac
tactacgatctgtcgtcgtttgacgaaggcgaggccaagattgcgctcaagcgcgtggcc
gacaagatcaagcggagagaggccgtgcggtctgcatga
DBGET
integrated database retrieval system
