Sporothrix schenckii: SPSK_01049
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Entry
SPSK_01049 CDS
T05555
Name
(RefSeq) ATP-dependent RNA helicase DDX55/SPB4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssck03009
]
SPSK_01049
Enzymes [BR:
ssck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPSK_01049
Ribosome biogenesis [BR:
ssck03009
]
Eukaryotic type
Pre-60S particles
Helicases
SPSK_01049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
AAA_22
ResIII
DUF1180
Motif
Other DBs
NCBI-GeneID:
27663257
NCBI-ProteinID:
XP_016583955
UniProt:
A0A0F2LWR6
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MAPVKKRSTRSWDAMGLPEWCLEAVSSMGFTEPTPAQAAAIPLFLGNSDIVVEAPTGSGK
SLSFLIPLVARILRRFGDKDAAPIKRGHVAAVILAPTRELAVQLHRVLLGLIAFHAPSAA
ILPYLQPRSKHLNEEEDSKRGKGKGSKKKPGSGLSADGKRIAGEDDPDAPSLLANTRRPE
TAEAVIVPQLVISGASIKASGDLATFVRQGTNILIGTPGRLAEMLSSQVVNSTVSFEALV
LDEADRLLDLGFANELRRILAFIPKQRRTFLCSASVNEAISELIKMNLRNPKRVAVRVQT
PKQREAQKGGQHTVDAAALALEIEEKKTPASLLNTYMVLPSSQKLPGLVQLLEQIEPRPQ
RTLVFLASCFAVMYFSAVLPAIMPEGYVVLSLHGKMKPHVREIAYERFLSSTKPCILLTT
DVASRGLDVPNVDLVINIDPPTDPKTFLHRCGRTGRAGRRGLAVTMLRPGREAEGYVPFL
AVRKTPVELLGVVVPDLVGVLGALPANEEADGSADREAATAITKAIRDQVKADREIHELG
RRAFVSWARAFKEHQASSIFRPADVDWVDLGHAWGLVQLPKMPELRAAGITDRSLGLEGE
IDVRAIPFKDKTKEKARQAEMRAMELAAAERDLDAEAAAARAAQLEKRKRNTAWSSKADR
DNVRVERRDKKRRKKDAERLAQMTPEERAEQERIEAIVAGIRHNNESEAAGAANDDEGWA
GIAD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagtgaaaaaacggagtacgcggtcatgggacgccatgggcctgcccgagtgg
tgcctcgaggccgtgtccagcatgggtttcaccgagcccacaccagcccaggcggctgca
atcccactctttctgggcaactctgatattgtcgtggaggcgccaacaggaagtggaaag
agtctttcatttctgatcccccttgttgcacgcatcctgaggagatttggcgataaggat
gccgcaccgatcaagcgtggacacgttgcggccgtaatcctagcaccgacacgagaactg
gccgtccagctgcaccgtgtgctgttggggctcatcgcgttccatgctccatcagcagct
attctaccatacctgcaaccacgatcgaaacatctgaacgaggaggaggacagtaaaagg
ggcaagggcaaaggaagcaagaagaagccaggatcgggtctctctgcggacggcaaacgg
atagctggcgaggacgaccccgatgcaccgtctttgctcgcaaacacccgacgacccgag
acggccgaggccgtgatcgtaccacagctcgtgatcagcggcgcatcgatcaaagccagt
ggcgatttggcgacctttgtgcgccaaggcacgaacattctcatcggcacccccggccga
ttagcagagatgttgtctagtcaagtcgtgaactcgacagtatccttcgaggcgcttgtg
ctcgacgaggccgaccgcttgttggacctcggttttgcgaacgaactgcgccgcattctc
gcgtttatcccgaaacaacggcggacattcttgtgttccgcatcggtcaacgaagccatc
agcgaactgatcaagatgaacttgagaaacccgaagcgcgttgctgtgcgagtacaaaca
ccgaaacagagagaggcacagaagggaggccagcatacagtagacgctgcggcgcttgct
ctagaaatcgaagagaagaaaacaccagccagtctactcaacacatatatggtgctgccc
tccagccaaaaactgccgggcctggtacagctgcttgaacaaatcgaaccgagaccccag
cggacactagtgttcctggcatcttgcttcgccgtcatgtacttctcagcagtactgccg
gccattatgcctgaaggctacgttgttttgtcactgcatggaaagatgaagccgcacgtg
cgcgaaattgcatatgagcggtttttgtcgtctacaaagccgtgcatcttgttgaccacg
gatgtcgccagtcgtggcctggacgtaccgaacgttgacctcgtgatcaacatcgaccca
ccaaccgacccaaagactttcctgcatcgttgtggtcgcacaggccgtgccggccgtcgt
ggtctagccgtcaccatgctacgaccaggccgtgaggccgagggctacgttccgttcctg
gctgtgcggaaaactcctgttgagctgctaggagtggttgtgcctgacctggtcggagtg
ctcggcgccctaccggcaaacgaggaagcggacggtagtgccgaccgggaggcggcaacc
gcaattaccaaggccattcgcgatcaggtcaaggctgatcgtgaaatccatgagttgggc
cggcgcgcatttgtgtcgtgggcccgtgccttcaaagagcaccaggcgtcgtcgattttc
cggcctgccgatgtggactgggtcgacctcggccatgcgtggggcctagtgcagctgccc
aagatgccggagcttcgagcggcggggatcacagatcggtcgttgggtctggagggtgaa
atcgacgtgcgtgcgatccccttcaaggacaagacaaaggagaaggcgcgccaggcggag
atgcgggcaatggagctcgcggcggccgaacgtgacttggacgccgaggcagcagcagca
agggcggcccagctcgagaagcggaagcgcaacacggcatggagcagtaaagcggaccgt
gacaacgtgcgcgtagagcggcgcgacaagaagcgacgcaagaaggatgcagagcgcctg
gcgcagatgacgcctgaagagcgggcagagcaagagcgtattgaggctattgttgcaggc
atccgacacaataatgagtctgaggcagctggtgctgctaacgacgacgagggctgggct
ggtattgctgattag
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