Sporothrix schenckii: SPSK_01394
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Entry
SPSK_01394 CDS
T05555
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ssck
Sporothrix schenckii
Pathway
ssck03030
DNA replication
ssck03410
Base excision repair
ssck03420
Nucleotide excision repair
ssck03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPSK_01394
03410 Base excision repair
SPSK_01394
03420 Nucleotide excision repair
SPSK_01394
03430 Mismatch repair
SPSK_01394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssck03032
]
SPSK_01394
03400 DNA repair and recombination proteins [BR:
ssck03400
]
SPSK_01394
DNA replication proteins [BR:
ssck03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SPSK_01394
DNA repair and recombination proteins [BR:
ssck03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SPSK_01394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_16
AAA_30
AAA_14
AAA_18
NACHT
RuvB_N
NTPase_1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
27663586
NCBI-ProteinID:
XP_016589758
UniProt:
A0A0F2MBS1
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MPDIRSFFGPKGGAAQAKPAVSKKEEDTAAKKGRGRARKVVEESDDDNVVEVKNSAKTTP
KKTKGASQPVEGVEISASDYFASTKSNQKPKTQTTPAKAAPKSLPKTEVEIRVSPRKKEN
VASASEPVKNGRSATATEPPAKKKRSTAAYKSYDLDDDEDAYNDDEDGGDDIFAADGKRG
KRKNDDYVEEDDSEEDDFAPKPKRVASRSAKAAITIDSDEDDFEPAPKKGKTASAKSSNA
AGSRTPSAVSKKRKTPESESDVDLSPVTKPRKKAATTATTTAASKPKTPAASTPKKAAAT
KAAASGATSNSSVQAILDSIPLIQPPSPPPKDGNAPKFNWRKAAAGGGNSGAPPNAGAVE
IPEGEPNCLAGQTFVFTGLLKTISRDEGQALVKRYGGKVMSAPSKNTGWIVLGDDAGPSK
LAKIQQFGIRTIDETGLFEMIKRLPAGGGDSKEAEKAREKQDKELEKIRLAAEEMNREEE
SKRLAAERAEKAAAKAAAKAPAANGKTGSAQAAARPPPAAKPAHPASSQQLWTTKYAPTQ
LTHICGNKAQVERIAAWLKNWPKAKKYDFKIKGADGLGNSRAIIISGPPGIGKTTAAHLA
AKLADHDIIENNASDTRSKKMVENGIGDAMDNTSLMGFFAADGKKVSTEKKNIVLIMDEV
DGMSAGDRGGIAALAKFCRKTEVPLILICNERRLPKMRPFDNVAFDIRFNRPTVDQIRSR
IMTICLREGLKMPTQVVDALIEGTGKDIRQIINMLSTAKLDQTTMSYDDGKAMTKAWEKH
VVLKPWDICQKLLGGGLFAPASKATLNDKIELYFNDHEFSFLMIQENYLSTRPQALTNST
PRSKREANLKYLELVDNAAESISDGDLVDRMIHGPQQQWSLMPTHAVFSSVRPASFIAGQ
LTHSGFTSWLGNNSKTGKFGRLLREIHSHMRLKASGDHNEIRQQYLPVLWYQLIKQLENE
GKDAIDGVIELMDNYYLTRDDVDAIRELGLGYMSEDTVNIDSQTKAAFTRTYNGMAHPVP
FMKATTATVAKKTARDAPDLEEAIEEDDDGDVVAEPVDEEDEELDLKKDKYIKQPKAKAK
RAAPKKKAAKDDGLDEEEEEAPKARGKGKATAPKKTGRGKK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacatccggtcattctttgggccaaaaggcggtgctgcacaggccaagccggcg
gtttcaaagaaagaagaggatacggcagctaagaagggccgtggaagagcccgcaaggtc
gtggaggaaagcgacgatgacaatgtggtcgaggtaaagaactcagcaaagaccacaccg
aagaagacgaaaggtgcatcacagcctgtcgaaggggttgagatctctgccagcgactac
tttgcctcgaccaagtcgaaccagaagcccaagacacaaacgacacctgccaaggctgcc
ccgaagagcctcccgaaaaccgaagttgaaatccgcgtaagcccaaggaagaaggagaac
gtagcttctgcatcggagcctgttaagaacggtcgctctgctacggcaacagaaccaccc
gcaaagaagaagcggtccacggccgcgtataaatcatacgacctcgacgacgatgaagac
gcgtacaatgacgacgaggacggcggtgacgacatttttgcggccgacggcaagagggga
aagagaaagaacgacgactatgtggaggaagacgacagcgaggaagacgactttgcgcct
aagcctaagagagtcgcctcgcgcagtgctaaggctgccatcacgatcgattccgatgaa
gacgatttcgagcccgcaccgaagaagggcaagaccgcatcggcaaagagtagcaacgcg
gccggtagtcggacgccatccgcggtaagcaagaagcgcaagacgccagagtcagagtcg
gatgtcgatctctcgcctgtcacaaagccgaggaagaaggccgccacgacagccactaca
acggctgcctctaaaccaaaaacgcccgctgcctcgactccgaaaaaagctgctgccacc
aaggctgccgccagcggcgcgaccagcaactcctccgttcaggccatcttggattccatc
ccgctgatccaacccccctcaccaccgcccaaggacggcaacgcgcccaagtttaactgg
cgaaaggcagctgctggcggcggtaactctggagctccgccaaatgctggcgctgtggag
ataccggagggtgagccaaattgtctggctggccagacttttgttttcactggtctcttg
aagacgattagtagagacgagggccaggctctggtcaagcggtacggtggcaaggtcatg
agtgcgccgagcaagaacactggctggattgtgctgggcgacgatgctggtcccagtaaa
ctcgccaagatccaacagtttggtattcgtaccattgacgagaccggcttgtttgagatg
atcaagcgcctgccagccggcggcggcgacagcaaagaggccgagaaggctcgcgagaag
caggacaaggaactggaaaagatccggctggcagccgaagagatgaaccgggaggaggaa
tccaagagacttgcagccgaaagggccgagaaggctgctgccaaagctgctgcaaaggcg
cccgccgcaaatgggaagaccggctctgctcaagctgctgctcgccccccacccgctgct
aagcctgcccatccggcaagctcccagcagctctggacgaccaagtatgcgccgacgcag
ttgacccatatctgcggcaacaaggcgcaggttgagcggattgcggcatggctgaagaac
tggccaaaggccaaaaagtacgacttcaagatcaaaggtgctgacggcttgggcaactcc
cgcgccatcattatttctggcccccctggcatcggcaagacgacggcggctcacctcgcg
gccaagctggccgaccacgacattatcgagaacaacgccagtgacacgcgcagcaagaag
atggtggaaaacggcattggcgacgccatggacaacacgtcgctcatgggtttctttgct
gccgacggcaagaaggtgtctacggaaaagaagaacattgtcttaatcatggacgaggta
gatggtatgtctgctggtgaccgtggcggcatcgcggcgctcgccaaattctgccggaag
actgaggtaccgcttatcctcatctgcaacgagcggcgtctgcccaagatgcggccgttt
gacaacgttgcttttgatattcgcttcaaccggccgaccgtcgaccagattcgctcgcgt
atcatgaccatttgtctccgtgaaggcctcaagatgccgacacaagtggtcgatgctctg
atcgagggcactggcaaggacattcggcagatcatcaacatgttgtctactgccaagctt
gaccagaccactatgtcgtacgacgatggcaaggccatgaccaaggcgtgggaaaagcac
gtggtgctgaagccgtgggatatttgccagaagctgcttggcggcggactgtttgcccct
gcgagcaaggccactctcaatgacaagattgagctgtacttcaacgaccacgagttcagt
ttcctgatgatccaggagaactacctcagcacgcgaccccaggcacttaccaacagcacg
ccgcgcagcaagcgggaggccaacctcaagtacctggagcttgtggacaatgcggccgag
agcatcagcgacggcgacctcgtggaccgcatgattcacggtccccagcagcagtggagt
ctgatgccgacgcacgctgtattcagttcggttcgcccagccagctttatcgccggccag
ctgacgcactcgggcttcacctcgtggcttggcaacaacagcaagacgggcaaatttggc
cgacttctgcgcgagatccactcgcacatgcggctcaaggcgtcgggcgaccacaacgag
atccgccagcagtacctgcccgttctctggtaccagcttattaagcaactggaaaatgag
ggcaaggatgctattgacggtgtcattgagttgatggacaattattacttgacacgagac
gatgtcgatgccatccgggagcttggtctggggtacatgtccgaggacactgtgaatatt
gattcccagaccaaggccgcctttaccagaacatacaacggcatggcccacccggttccg
ttcatgaaggcgaccacggcgacggtggcgaaaaagacggcgcgcgatgctcccgacttg
gaggaagccattgaagaggacgacgacggcgacgtcgtcgccgagcccgttgatgaggag
gacgaggagctagacctgaagaaggacaagtacatcaagcagcccaaggctaaggctaag
cgtgcggcgcccaagaagaaggccgccaaggacgacggcttggatgaggaagaggaggag
gcgcccaaagcgcgcggcaagggcaaggcgacggcgcccaaaaagacgggaagaggcaag
aagtga
DBGET
integrated database retrieval system
