Sporothrix schenckii: SPSK_01722
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Entry
SPSK_01722 CDS
T05555
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
ssck
Sporothrix schenckii
Pathway
ssck03013
Nucleocytoplasmic transport
ssck03015
mRNA surveillance pathway
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_01722
09122 Translation
03013 Nucleocytoplasmic transport
SPSK_01722
03015 mRNA surveillance pathway
SPSK_01722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_01722
03041 Spliceosome [BR:
ssck03041
]
SPSK_01722
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SPSK_01722
TREX complex
SPSK_01722
Spliceosome [BR:
ssck03041
]
Complex C
Other components
EJC/TREX
SPSK_01722
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SPSK_01722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
DUF6857
XRN_M
Motif
Other DBs
NCBI-GeneID:
27663905
NCBI-ProteinID:
XP_016589704
UniProt:
A0A0F2MBF9
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MAYAFISDDGFQKAGLTAARKPDTPHGGPFISQNFAVAWDMAQQGRFARTGRTVATTKGS
AGWYMAGMRLAPSNSRDYDYFGQAVGQVKRVELSYGPGGVSRGIATVVFHHADGASKAFS
ELNGLLIDNRAVKVEVVVAKAELIPQPKTLGQRITQPKAQPKSAATDKRAGNAAKGASNQ
KANNQNNANKKPGQGRRARSARPAKKTAEELDSEMADYFVSNGTATNGATAPAAAPAAAA
AAPAAATADAPMDDDIM
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgcgtttatctcggatgacggttttcagaaagctggcttaacagcggctcgg
aaacccgacacaccacatggcggccctttcatttcgcagaacttcgctgtcgcctgggat
atggctcaacaaggaaggtttgcgcgaactggccgcacggttgcgacgacaaaaggttcc
gctggttggtacatggctggaatgcgcctcgccccatcgaattcgagagattatgattac
tttggtcaggctgttggtcaggtcaagagagtcgagctgtcgtatggccctggtggcgtc
agccgtggtatcgccacagtcgtgttccaccacgccgacggcgccagcaaggctttctct
gagctgaacggtctgcttatcgacaaccgtgctgtgaaggtcgaggttgtcgttgccaag
gccgagcttatccctcagccgaagactctgggccagcgcatcacgcagcccaaggcacag
cccaagtccgccgccactgacaagcgtgctggtaacgctgccaagggagctagcaaccag
aaggccaacaaccagaacaacgccaacaagaagcccggccagggtcgtcgtgcgcgtagc
gcccgcccggctaagaagaccgccgaggagcttgactcggagatggccgactactttgtt
agcaatggcacggccacgaacggcgctactgccccggccgccgctcccgccgccgctgct
gctgcccctgcggcagcgaccgctgatgccccgatggacgacgatattatgtaa
DBGET
integrated database retrieval system