KEGG   Sporothrix schenckii: SPSK_01722
Entry
SPSK_01722        CDS       T05555                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
ssck  Sporothrix schenckii
Pathway
ssck03013  Nucleocytoplasmic transport
ssck03015  mRNA surveillance pathway
ssck03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPSK_01722
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPSK_01722
   03015 mRNA surveillance pathway
    SPSK_01722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssck03019]
    SPSK_01722
   03041 Spliceosome [BR:ssck03041]
    SPSK_01722
Messenger RNA biogenesis [BR:ssck03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SPSK_01722
    TREX complex
     SPSK_01722
Spliceosome [BR:ssck03041]
 Complex C
  Other components
   EJC/TREX
    SPSK_01722
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    SPSK_01722
SSDB
Motif
Pfam: RRM_1 FoP_duplication DUF6857 XRN_M
Other DBs
NCBI-GeneID: 27663905
NCBI-ProteinID: XP_016589704
UniProt: A0A0F2MBF9
LinkDB
Position
Unknown
AA seq 257 aa
MAYAFISDDGFQKAGLTAARKPDTPHGGPFISQNFAVAWDMAQQGRFARTGRTVATTKGS
AGWYMAGMRLAPSNSRDYDYFGQAVGQVKRVELSYGPGGVSRGIATVVFHHADGASKAFS
ELNGLLIDNRAVKVEVVVAKAELIPQPKTLGQRITQPKAQPKSAATDKRAGNAAKGASNQ
KANNQNNANKKPGQGRRARSARPAKKTAEELDSEMADYFVSNGTATNGATAPAAAPAAAA
AAPAAATADAPMDDDIM
NT seq 774 nt   +upstreamnt  +downstreamnt
atggcatacgcgtttatctcggatgacggttttcagaaagctggcttaacagcggctcgg
aaacccgacacaccacatggcggccctttcatttcgcagaacttcgctgtcgcctgggat
atggctcaacaaggaaggtttgcgcgaactggccgcacggttgcgacgacaaaaggttcc
gctggttggtacatggctggaatgcgcctcgccccatcgaattcgagagattatgattac
tttggtcaggctgttggtcaggtcaagagagtcgagctgtcgtatggccctggtggcgtc
agccgtggtatcgccacagtcgtgttccaccacgccgacggcgccagcaaggctttctct
gagctgaacggtctgcttatcgacaaccgtgctgtgaaggtcgaggttgtcgttgccaag
gccgagcttatccctcagccgaagactctgggccagcgcatcacgcagcccaaggcacag
cccaagtccgccgccactgacaagcgtgctggtaacgctgccaagggagctagcaaccag
aaggccaacaaccagaacaacgccaacaagaagcccggccagggtcgtcgtgcgcgtagc
gcccgcccggctaagaagaccgccgaggagcttgactcggagatggccgactactttgtt
agcaatggcacggccacgaacggcgctactgccccggccgccgctcccgccgccgctgct
gctgcccctgcggcagcgaccgctgatgccccgatggacgacgatattatgtaa

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