Sporothrix schenckii: SPSK_01955
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Entry
SPSK_01955 CDS
T05555
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ssck
Sporothrix schenckii
Pathway
ssck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPSK_01955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_01955
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SPSK_01955
mRNA degradation factors
5'-3' decay
Lsm complex
SPSK_01955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
27664130
NCBI-ProteinID:
XP_016589996
UniProt:
A0A0F2MEN8
LinkDB
All DBs
Position
Unknown
AA seq
181 aa
AA seq
DB search
MENLSISEPPPLGGPGGPQMRPPPQQQQLPAQMFTTAAQLLDLTDKKLIVVLRDGRKVLG
VLRTWDQFANLILQNAVERTFLPPGAFEASAAPESAAQGRGLYADIPRGTYLVRGENVLL
LGEIDLDRDDEPPPGHDKIDAEVMAELAKKKKAADKVVEKARVKKLSGLGFEGENMGEIL
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggagaatctgtccatctctgaaccgccgccgctgggcgggcctggcggtccccagatg
cggccacccccacagcagcagcagctgccggcgcagatgttcacaaccgcggcccagctg
ctcgacctgacagacaaaaagttgattgtcgtcctgcgtgatgggagaaaagtgttgggc
gtgttacgaacatgggatcagtttgccaatttaatattacaaaacgcggtcgagaggaca
ttcctgccaccgggcgcatttgaggccagcgccgctcccgagagtgctgcacagggccgg
ggcctgtacgccgacatcccgcgggggacgtatctggtgcgcggcgagaacgtgctgctg
ctgggcgagattgacttggaccgcgatgacgagccgccaccgggccatgacaagatcgat
gcagaggtgatggcggagctggccaagaagaaaaaggcagcagacaaggtggtggaaaag
gcgcgggtgaaaaagctctcgggcctcggcttcgaaggcgagaacatgggcgagatcctg
ctgtag
DBGET
integrated database retrieval system
