KEGG   Sporothrix schenckii: SPSK_02156
Entry
SPSK_02156        CDS       T05555                                 
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
ssck  Sporothrix schenckii
Pathway
ssck03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPSK_02156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssck03021]
    SPSK_02156
   03041 Spliceosome [BR:ssck03041]
    SPSK_02156
   03036 Chromosome and associated proteins [BR:ssck03036]
    SPSK_02156
Transcription machinery [BR:ssck03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     SPSK_02156
Spliceosome [BR:ssck03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    SPSK_02156
 Complex B
    SPSK_02156
 Complex C
   U2 SnRNP specific factors
    SPSK_02156
Chromosome and associated proteins [BR:ssck03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     SPSK_02156
    TFTC complex
     SPSK_02156
SSDB
Motif
Pfam: Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 27664310
NCBI-ProteinID: XP_016589075
UniProt: A0A0F2MBC3
LinkDB
Position
Unknown
AA seq 1246 aa
MATATSNMFLYSLTLQPPTTISHAILGQFSGTKEQQILVASGSRLALLRPEPAQGKVVTV
LAHDVFGIIRALASFRLAGSSKDASDGVPSGRVPFLAASVVLLLLVANKTSLCLPDYIIL
ATDSGRITIVEYIPAENRFSRVHLETFGKSAVRRVVPGQYLAADPKGRACLIAAVEKNKL
VYVLNRNAQAELTISSPLEAHKPGVIVIAMVALDVGYSNPVFAALEMDYSESDQDPTGEA
YRESETLLVYYELDLGLNHVVRRWSDPVDATASILFQVPGGNDGPSGVLVCSEENVTYRH
SYQEAFRVPIPRRRGATEDPSRKRTIVSGVMHKLKGNAGAFFFLLQTEDGDLFKVTLDMV
EDDDGNPTGEVLRLKIKYFDTVPVASSLCILKSGFLFVACEFGNHHFYQFEKLGDDDDEL
EFSSDNFPADPKAPYEPVYFSPRLAENLALVESIDATNPMLDVKIANLTEDDAPQIYSVC
GNGARSTFRMLKHALEVNEIVASQLPGTPTAVWTTKVRRDDDFDSYIVLSFNNGTLVLSI
GETVEEVRDTGFLTGVPTLAVQQLGDDGLIQVHPKGIRHIRDGRVNEWPAPQHRSIIIAA
TNERQVCVALSSGEIVYFEMDTDGSLAEYDEKKEMSGTVTSLSLGAVPEGRLRSSFLAVG
CDDCTVRILSLDPETTLENMSVQALTAAPSALLIMAMDDSSAGGSAMYLHIGLNSGVYLR
TVLDEVTGELTDTRQRFLGPKQVRLFSVSVQRRVCVLALSSRPWLGYDDSKAKNFAMTPL
DYGELEFGWNFSSEQCEEGMVGIYGNFLRIFSIEKLGEPLIQKTFPLTYTPRRLAKHPEL
GIFYTIESDNNTLSPYLRRQLLEASGATNGNAQPLPPADFGYPRGNGRWASCISVVDPVG
EDPGVTQTIELEGNEAAVSMAVAPFTSRNGESYLIVGTGKDMVMSPRRFSEGYLHAYRIS
DDGKQLEFLHKTKVEEPPTAMIPFQGRLLVGIGKVLRIYDLGIKQMLRKAQGDVTDKLIV
SLATQGSRIIVGDLEEGVTYVVYKPEVNKLLPFVDDTIKRWTTCTTMVDYQTVAGGDKFG
NLWIVRAADKVSQDVDEPGSELQLVHARSYLHGTPNRLALMAHMYTQDVPMSICKTSLVV
GGQEVLVWSGLQGTVGVLVPFVNREDADFFQNLETHMRQEDAPLAGRDHLMYRSYYVPVK
GVIDGDLCERFNLLPRDKKQMIAGELDRSVREIERKISDVRTRSAF
NT seq 3741 nt   +upstreamnt  +downstreamnt
atggcgaccgccacgtcgaacatgtttctctactcgctgacgctgcagccgccgaccacg
atcagccatgccatcctcggccagttctccggcaccaaggagcagcagatcctggtcgcg
tccggctcgcgtctggccctcctgcgtcccgagcccgcccagggcaaggtcgtgacagtg
ctggcccacgacgtcttcggcatcatccgtgccctcgcgtcgtttcggctggctggaagc
tccaaagacgcgtccgacggcgtaccgtccgggcgtgtccccttcctagcagcgtctgtt
gttttgcttttactggtggctaacaagacctctttgtgcctcccagactacattatcctg
gctacagactcgggccgcatcacaatcgtggagtacatccctgccgagaaccgtttttca
cgcgtgcatctcgagacctttggcaagtccgccgtgcggcgcgtcgtgcccggccagtac
cttgctgccgatcccaagggccgcgcgtgcttgatcgccgccgtcgagaagaacaagctg
gtctatgtgctgaaccgcaatgcccaggcggagctcaccatctcgtcgcctctcgaggcc
cacaagccgggcgtcattgtcatcgccatggtggcacttgacgtcggctactccaaccct
gtgtttgctgcgctggagatggactacagcgagtcggaccaggacccgacgggcgaggcg
taccgcgaatcggagacgctgctggtctactacgagctggaccttggcctcaaccacgtc
gtgcggcgctggtccgaccccgtggatgccactgcctcgattctcttccaagtgcccggc
ggcaacgacggccccagcggcgtcctcgtctgcagcgaagagaatgtcacctaccgccac
tcctaccaagaggccttccgcgtgcccatcccacggcgacgtggtgccacggaggacccc
agccgcaagcgcaccattgtgtcgggcgtcatgcacaagctcaagggcaatgccggtgcc
tttttcttcctcctgcagacagaggatggcgacctgttcaaggtgaccctggacatggtc
gaggacgacgacggcaacccgacaggcgaggtgctgcgcctcaagatcaagtactttgac
acggtgcccgtcgcgtcgagcctctgcattctcaagagcggctttctgtttgttgcgtgc
gagtttggcaaccaccacttttaccagtttgagaagctcggcgacgacgacgacgagctc
gagttctccagcgacaacttccccgccgatcccaaggcgccatacgagcccgtctacttt
tctccgcggctggcggaaaacctcgccctggtcgagagcatcgacgctaccaaccccatg
ctggacgtcaagattgccaacttgaccgaggacgacgcaccacagatctactcggtctgc
ggcaatggcgcgcgcagcaccttccggatgctgaaacacgccctggaggtgaacgagatt
gtcgcgtcccagctgcccggcacacccacggccgtgtggaccaccaaggtgcgccgggac
gacgattttgactcgtacattgtgctgtcgttcaacaacggcacgctcgtcctgagcatt
ggcgaaaccgtcgaggaggtacgggacacgggcttcctcacaggcgttcccacgcttgct
gtccagcagctgggcgacgacggcctcatccaggtgcaccccaagggcatccggcacatc
cgcgacggccgcgtgaacgagtggccggcgccgcagcaccggtccattatcattgcggcc
accaacgagcggcaagtctgtgttgccctcagctcgggggagattgtctactttgagatg
gacaccgacggctcgctcgccgagtacgacgagaagaaggagatgtcgggcaccgtcacc
agcttgagcctgggtgccgtgcccgaaggccgtctccgcagttcctttttggccgtgggc
tgcgacgactgcaccgtgcgcattttgagcctcgacccggagacgacgctggagaacatg
tccgtccaagcactgacggcggcgccctcggcgctgctcattatggccatggacgactcg
tctgcagggggctccgccatgtacctgcacattggcctcaactcgggcgtgtacctgcgt
accgtcttggacgaagtgacgggcgagctcacggacacgcggcagcgtttcttgggccca
aaacaggtgcgcctgttctcggtgtccgtgcagagacgggtctgcgtgctggcactcagc
tcccgtccctggctcggctacgacgacagcaaggccaagaactttgccatgaccccgctc
gactacggcgagctcgagttcggctggaactttagcagcgagcagtgcgaagagggcatg
gttggcatctatggcaactttttacgaatcttctcgattgagaaactaggcgaacctctc
attcagaaaaccttccccttgacatataccccccgccggctcgccaaacatcccgagctc
ggcatcttctacacgatcgaatccgacaacaacaccctctctccatacctacggcggcaa
cttctggaagcgtcaggcgccaccaacggcaacgcacagcccctcccgccggccgacttt
ggctacccgcggggcaatggccgctgggcttcgtgcatcagcgtcgttgaccccgtcggc
gaggacccgggcgtcacgcagaccattgagctcgagggcaacgaggccgcggtgagcatg
gccgtcgcgccgttcacgagccgcaacggcgagagctacctgattgtgggcacgggtaag
gacatggtcatgagcccgcgccgtttctccgagggctacctccacgcgtaccgcatcagc
gacgacggcaagcagctcgagttcctccacaagaccaaggtggaagagccaccaacggcc
atgattcccttccagggccgcctgctggtgggcatcggcaaggtgctccggatctacgat
ctgggcatcaagcagatgctgcgcaaggcccagggcgacgtgaccgacaagctgattgtg
tctctggctacgcagggcagccgcatcattgtgggcgacctggaagagggcgtcacgtac
gtggtgtacaagcccgaagtcaacaagctgctgccgtttgtcgacgacaccatcaagcgc
tggaccacgtgcacaacaatggtcgactaccagacggtggccggcggcgacaagtttggc
aacctgtggattgtgcgggcggccgacaaggtcagccaggacgtcgacgagcccgggtcc
gagctgcagctggtgcatgcgcgcagctacctgcacggcacgccgaaccgcctggcgctg
atggcgcacatgtacacgcaggacgtgccgatgagcatctgcaagacgagcctggtcgtg
ggcggccaggaggtgcttgtctggagcggcctgcagggcaccgtcggcgtgctggtgccg
tttgtcaaccgcgaggatgccgactttttccagaacctggagacgcacatgcggcaggaa
gacgcgccgctggccggccgcgaccacctcatgtaccggtcgtactatgtgccggtcaag
ggcgtgattgacggcgacctgtgcgagcggttcaatctgctgccgcgcgacaagaaacag
atgattgcgggcgagctggaccggtcggtacgcgagattgagcgcaagatctcggacgtt
cgcacacgatccgccttttag

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