Sporothrix schenckii: SPSK_02156
Help
Entry
SPSK_02156 CDS
T05555
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ssck
Sporothrix schenckii
Pathway
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_02156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_02156
03041 Spliceosome [BR:
ssck03041
]
SPSK_02156
03036 Chromosome and associated proteins [BR:
ssck03036
]
SPSK_02156
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
SPSK_02156
Spliceosome [BR:
ssck03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
SPSK_02156
Complex B
SPSK_02156
Complex C
U2 SnRNP specific factors
SPSK_02156
Chromosome and associated proteins [BR:
ssck03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
SPSK_02156
TFTC complex
SPSK_02156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
27664310
NCBI-ProteinID:
XP_016589075
UniProt:
A0A0F2MBC3
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MATATSNMFLYSLTLQPPTTISHAILGQFSGTKEQQILVASGSRLALLRPEPAQGKVVTV
LAHDVFGIIRALASFRLAGSSKDASDGVPSGRVPFLAASVVLLLLVANKTSLCLPDYIIL
ATDSGRITIVEYIPAENRFSRVHLETFGKSAVRRVVPGQYLAADPKGRACLIAAVEKNKL
VYVLNRNAQAELTISSPLEAHKPGVIVIAMVALDVGYSNPVFAALEMDYSESDQDPTGEA
YRESETLLVYYELDLGLNHVVRRWSDPVDATASILFQVPGGNDGPSGVLVCSEENVTYRH
SYQEAFRVPIPRRRGATEDPSRKRTIVSGVMHKLKGNAGAFFFLLQTEDGDLFKVTLDMV
EDDDGNPTGEVLRLKIKYFDTVPVASSLCILKSGFLFVACEFGNHHFYQFEKLGDDDDEL
EFSSDNFPADPKAPYEPVYFSPRLAENLALVESIDATNPMLDVKIANLTEDDAPQIYSVC
GNGARSTFRMLKHALEVNEIVASQLPGTPTAVWTTKVRRDDDFDSYIVLSFNNGTLVLSI
GETVEEVRDTGFLTGVPTLAVQQLGDDGLIQVHPKGIRHIRDGRVNEWPAPQHRSIIIAA
TNERQVCVALSSGEIVYFEMDTDGSLAEYDEKKEMSGTVTSLSLGAVPEGRLRSSFLAVG
CDDCTVRILSLDPETTLENMSVQALTAAPSALLIMAMDDSSAGGSAMYLHIGLNSGVYLR
TVLDEVTGELTDTRQRFLGPKQVRLFSVSVQRRVCVLALSSRPWLGYDDSKAKNFAMTPL
DYGELEFGWNFSSEQCEEGMVGIYGNFLRIFSIEKLGEPLIQKTFPLTYTPRRLAKHPEL
GIFYTIESDNNTLSPYLRRQLLEASGATNGNAQPLPPADFGYPRGNGRWASCISVVDPVG
EDPGVTQTIELEGNEAAVSMAVAPFTSRNGESYLIVGTGKDMVMSPRRFSEGYLHAYRIS
DDGKQLEFLHKTKVEEPPTAMIPFQGRLLVGIGKVLRIYDLGIKQMLRKAQGDVTDKLIV
SLATQGSRIIVGDLEEGVTYVVYKPEVNKLLPFVDDTIKRWTTCTTMVDYQTVAGGDKFG
NLWIVRAADKVSQDVDEPGSELQLVHARSYLHGTPNRLALMAHMYTQDVPMSICKTSLVV
GGQEVLVWSGLQGTVGVLVPFVNREDADFFQNLETHMRQEDAPLAGRDHLMYRSYYVPVK
GVIDGDLCERFNLLPRDKKQMIAGELDRSVREIERKISDVRTRSAF
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccacgtcgaacatgtttctctactcgctgacgctgcagccgccgaccacg
atcagccatgccatcctcggccagttctccggcaccaaggagcagcagatcctggtcgcg
tccggctcgcgtctggccctcctgcgtcccgagcccgcccagggcaaggtcgtgacagtg
ctggcccacgacgtcttcggcatcatccgtgccctcgcgtcgtttcggctggctggaagc
tccaaagacgcgtccgacggcgtaccgtccgggcgtgtccccttcctagcagcgtctgtt
gttttgcttttactggtggctaacaagacctctttgtgcctcccagactacattatcctg
gctacagactcgggccgcatcacaatcgtggagtacatccctgccgagaaccgtttttca
cgcgtgcatctcgagacctttggcaagtccgccgtgcggcgcgtcgtgcccggccagtac
cttgctgccgatcccaagggccgcgcgtgcttgatcgccgccgtcgagaagaacaagctg
gtctatgtgctgaaccgcaatgcccaggcggagctcaccatctcgtcgcctctcgaggcc
cacaagccgggcgtcattgtcatcgccatggtggcacttgacgtcggctactccaaccct
gtgtttgctgcgctggagatggactacagcgagtcggaccaggacccgacgggcgaggcg
taccgcgaatcggagacgctgctggtctactacgagctggaccttggcctcaaccacgtc
gtgcggcgctggtccgaccccgtggatgccactgcctcgattctcttccaagtgcccggc
ggcaacgacggccccagcggcgtcctcgtctgcagcgaagagaatgtcacctaccgccac
tcctaccaagaggccttccgcgtgcccatcccacggcgacgtggtgccacggaggacccc
agccgcaagcgcaccattgtgtcgggcgtcatgcacaagctcaagggcaatgccggtgcc
tttttcttcctcctgcagacagaggatggcgacctgttcaaggtgaccctggacatggtc
gaggacgacgacggcaacccgacaggcgaggtgctgcgcctcaagatcaagtactttgac
acggtgcccgtcgcgtcgagcctctgcattctcaagagcggctttctgtttgttgcgtgc
gagtttggcaaccaccacttttaccagtttgagaagctcggcgacgacgacgacgagctc
gagttctccagcgacaacttccccgccgatcccaaggcgccatacgagcccgtctacttt
tctccgcggctggcggaaaacctcgccctggtcgagagcatcgacgctaccaaccccatg
ctggacgtcaagattgccaacttgaccgaggacgacgcaccacagatctactcggtctgc
ggcaatggcgcgcgcagcaccttccggatgctgaaacacgccctggaggtgaacgagatt
gtcgcgtcccagctgcccggcacacccacggccgtgtggaccaccaaggtgcgccgggac
gacgattttgactcgtacattgtgctgtcgttcaacaacggcacgctcgtcctgagcatt
ggcgaaaccgtcgaggaggtacgggacacgggcttcctcacaggcgttcccacgcttgct
gtccagcagctgggcgacgacggcctcatccaggtgcaccccaagggcatccggcacatc
cgcgacggccgcgtgaacgagtggccggcgccgcagcaccggtccattatcattgcggcc
accaacgagcggcaagtctgtgttgccctcagctcgggggagattgtctactttgagatg
gacaccgacggctcgctcgccgagtacgacgagaagaaggagatgtcgggcaccgtcacc
agcttgagcctgggtgccgtgcccgaaggccgtctccgcagttcctttttggccgtgggc
tgcgacgactgcaccgtgcgcattttgagcctcgacccggagacgacgctggagaacatg
tccgtccaagcactgacggcggcgccctcggcgctgctcattatggccatggacgactcg
tctgcagggggctccgccatgtacctgcacattggcctcaactcgggcgtgtacctgcgt
accgtcttggacgaagtgacgggcgagctcacggacacgcggcagcgtttcttgggccca
aaacaggtgcgcctgttctcggtgtccgtgcagagacgggtctgcgtgctggcactcagc
tcccgtccctggctcggctacgacgacagcaaggccaagaactttgccatgaccccgctc
gactacggcgagctcgagttcggctggaactttagcagcgagcagtgcgaagagggcatg
gttggcatctatggcaactttttacgaatcttctcgattgagaaactaggcgaacctctc
attcagaaaaccttccccttgacatataccccccgccggctcgccaaacatcccgagctc
ggcatcttctacacgatcgaatccgacaacaacaccctctctccatacctacggcggcaa
cttctggaagcgtcaggcgccaccaacggcaacgcacagcccctcccgccggccgacttt
ggctacccgcggggcaatggccgctgggcttcgtgcatcagcgtcgttgaccccgtcggc
gaggacccgggcgtcacgcagaccattgagctcgagggcaacgaggccgcggtgagcatg
gccgtcgcgccgttcacgagccgcaacggcgagagctacctgattgtgggcacgggtaag
gacatggtcatgagcccgcgccgtttctccgagggctacctccacgcgtaccgcatcagc
gacgacggcaagcagctcgagttcctccacaagaccaaggtggaagagccaccaacggcc
atgattcccttccagggccgcctgctggtgggcatcggcaaggtgctccggatctacgat
ctgggcatcaagcagatgctgcgcaaggcccagggcgacgtgaccgacaagctgattgtg
tctctggctacgcagggcagccgcatcattgtgggcgacctggaagagggcgtcacgtac
gtggtgtacaagcccgaagtcaacaagctgctgccgtttgtcgacgacaccatcaagcgc
tggaccacgtgcacaacaatggtcgactaccagacggtggccggcggcgacaagtttggc
aacctgtggattgtgcgggcggccgacaaggtcagccaggacgtcgacgagcccgggtcc
gagctgcagctggtgcatgcgcgcagctacctgcacggcacgccgaaccgcctggcgctg
atggcgcacatgtacacgcaggacgtgccgatgagcatctgcaagacgagcctggtcgtg
ggcggccaggaggtgcttgtctggagcggcctgcagggcaccgtcggcgtgctggtgccg
tttgtcaaccgcgaggatgccgactttttccagaacctggagacgcacatgcggcaggaa
gacgcgccgctggccggccgcgaccacctcatgtaccggtcgtactatgtgccggtcaag
ggcgtgattgacggcgacctgtgcgagcggttcaatctgctgccgcgcgacaagaaacag
atgattgcgggcgagctggaccggtcggtacgcgagattgagcgcaagatctcggacgtt
cgcacacgatccgccttttag
DBGET
integrated database retrieval system