Sporothrix schenckii: SPSK_02162
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Entry
SPSK_02162 CDS
T05555
Name
(RefSeq) ATP-dependent RNA helicase DHX37/DHR1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssck03009
]
SPSK_02162
Enzymes [BR:
ssck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPSK_02162
Ribosome biogenesis [BR:
ssck03009
]
Eukaryotic type
90S particles
Helicases
SPSK_02162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
OB_NTP_bind
DEAD
AAA_19
T2SSE
AAA_22
nSTAND3
MoCF_biosynth
ATPase
TsaE
HA2_N
LSDAT_prok
PhoH
Motif
Other DBs
NCBI-GeneID:
27664316
NCBI-ProteinID:
XP_016589292
UniProt:
A0A0F2MEN1
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MPAAKKFVPRQRKHKARAREAREADERANAGDRTGDGSRTRTRATDVVDSNATTIVPEEQ
RARNEKKAQLRAELRAGQATQMSAKKAKRLEKYIETKLRKDESRALNEKLAAHSVDPAIF
ESSRDLGKGKKRRRAEQAKQRSVVRQGGDSDESDSDNEEEDDEEKDVPMAKIGTGASAAP
APAPAPALSTGSSLFGSGFAVGSGLKRPLDLDDDGRPILKKRKKRGGVKSKFNVETVKQP
QPTFTITRRDRESEDESEDDGAAIDHSGEEWGGLSDDDKETKGYEEEEDGDDDDDEESSQ
DEDEDDSDDDDDDDDSEGSSDPEETRPSAFKAWAQAQRNEALGFKGATGETTTTYEFPVV
HDFEPRPVEAEPLPASLQPTQRLDRRAFHVDVSRTPEVEKQRMELPVVAEEQQIVEAIHE
HDIVILSGGTGSGKTTQVPQFLYEAGFGHAASEYPGMIGVTQPRRVAAVSMARRVAEELG
PEHGKAVAYQIRFESSVSSSTAIKFMTDGVLLRELSEDVALRSYSAVLIDEAHERSINTD
VLIGIVSRVNTIRAEMNARHADDTDDTSTKPLKPLKIVIMSATLQVADFAKNRALFAEPP
RMVHVEGRQYPVTVHFAQHTHHDYVAEAFRKIVRGHRKLPPGGFLVFLTGEDEIQRLAKQ
LRLAIDGVHTATGPKVRLSTSEMAYETEDIEFGGGLGDENGKDAKHLDGEDDEEDDYDKD
NEDDDDADDDDGGEEEFVPDEGETAGSGPKNVQILPLFSKLSTKDQQRVFQDAPDGARQI
ILATNIAETSLTIPGVRYVFDCGRAKARTFNKQTGVQSFEVGWISKASASQRSGRAGRTG
PGHCYRLYSSAVYEENFAEFAEPEILRMPIEGVVLQLKSMHVPSISAFPFPTPPDTGSIL
RAERLLMYLSAASKTDDDAAGRRRAITPLGQLMSAFPLSPRFAKILMVGHPGGCIHYVIA
LVAALSADEVFVRPNNAIPAASATAKSPADREEDGEHADSDAETTKPRVRTQEDIRQDEA
RRRTAELFRKVHRQFTSLDDKSDALKLLQVVGEFSHEPTEAWCRGHFVHYKALREVQKMR
RQITNLLRTNVPVHAAANLTYQEQLPRPTDVQIRLLKQMVAAGFPENIALRADLSPNPPQ
YTNAGGAVHKPRRAIEVPYRTLFPVPSDGGASGGGHASRTEFVYIHPSSPLAHMTVAECP
QYVVYSHLQRTAPSPDMDAAVSLPKVRMRALTDISGLQLASLLQGTPLLAYGKPIKETFR
SDDGRERECWVVPTLQADDGSGVGGMGWPLPAIKVRQRKVPGQGWEMVGK
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagcaaagaaattcgtgccgcggcagcgcaagcacaaggcccgggcgcgcgag
gcccgggaggccgacgaacgcgccaatgccggtgacagaacgggcgacggctcgcggacg
cggacgcgggccaccgacgtggtggacagcaatgccaccaccatcgtacccgaagagcag
cgggcccgcaacgagaaaaaggcgcagctgcgtgcggagctgcgtgcgggccaggccacg
cagatgagcgcgaaaaaggcgaagcggctggaaaagtacattgagacaaaactgcgcaaa
gacgagagccgcgcgctcaacgaaaaactggcggcacacagcgtggacccggccattttc
gagagcagccgggacctgggcaagggcaagaagcggcggcgggccgaacaggcgaagcag
cggagtgtcgttcggcaaggcggggatagcgacgaaagcgacagtgataatgaagaggag
gacgatgaggagaaggacgtaccaatggccaaaattgggaccggggcgagtgcagcacct
gctccagcaccagctccagcactgtcgaccggcagctcgctgttcggctccggatttgcg
gttggctcgggcctcaagcgaccgctcgacctcgacgacgacgggcggccgatcctcaag
aagcgcaagaagcgcggtggcgtcaagtccaaattcaacgtggaaacggtcaagcagccg
cagccgacttttaccataacacgacgggacagagagagcgaggatgagagcgaggacgac
ggtgcagccatcgaccacagtggagaggagtggggtggactgtcggacgatgacaaggag
acaaagggatacgaggaggaggaggatggcgatgacgacgatgatgaggagagttcgcag
gacgaggatgaagacgacagcgacgacgacgacgacgacgacgacagcgaaggcagctcg
gaccctgaagagacccgtccctcagccttcaaagcttgggcgcaagcacagcgcaacgag
gcactcggtttcaaaggcgccacgggcgagacgaccacgacgtacgagttccccgtcgtc
cacgacttcgaaccacgacctgtcgaggccgagccactgcccgccagcctgcagcccacc
cagcgcctcgaccgcagggctttccacgtggacgtgtctcggacgcccgaggtcgagaag
cagcgcatggaactgcccgtcgtcgccgaggaacagcagatcgtcgaggccatccacgag
cacgacattgtcatcctgtcgggcggcacgggctccggcaagaccacgcaggtgccgcag
ttcctgtacgaggcgggtttcggccacgcggcgtccgagtacccgggcatgatcggcgtg
acgcagccgcgtcgtgtggcggccgtcagcatggcgcggcgcgtggccgaggagctgggc
cccgagcacggcaaggcggtggcgtaccagatccggttcgagagcagcgtgtcgagcagc
acggcgatcaaatttatgacggacggcgtgctgctgcgcgagctgagcgaggacgttgcg
ctgcgcagctactcggccgtgctgatcgacgaggcacacgagcgcagcatcaacacggac
gtgctgattggcattgtcagccgcgtcaacacgatccgggccgagatgaatgcgcggcac
gccgacgacaccgacgacacgagcaccaagccgctgaagccactgaaaattgtcatcatg
tctgccacgctgcaggtggccgacttcgccaagaaccgcgcgctctttgcggagcccccg
cgcatggtccacgtcgagggccgccagtaccccgtgacggtgcactttgcgcagcacacg
caccacgactacgtcgcggaggccttccgcaagattgtgcgcggccaccgcaagttgccg
ccgggcggcttcttggtgtttttgacgggcgaagacgagatccagcggctggccaagcag
ctgcggctggccattgacggcgtgcacacggccacgggccccaaggtgcggctgtcgacg
tcggagatggcgtacgagacggaggacattgagtttggcggcggcctgggcgacgagaac
ggaaaagacgccaagcatctggacggcgaggacgacgaggaggacgattacgacaaagac
aacgaagacgacgacgacgccgatgacgacgacggcggcgaggaggagtttgtgccggac
gagggcgagacggcaggctctggccccaagaacgtacagatcctgccgctcttctccaag
ctgtccaccaaagaccagcagcgcgtgttccaagacgcgcccgacggcgcgcggcagatc
atcctggccaccaacatcgccgagacgagtctgacgattccgggcgtgcgctacgtcttc
gactgcggccgcgccaaggcgcgcacgttcaacaagcagacgggcgtgcagagcttcgag
gtgggctggatcagcaaggccagcgcgagccagcgcagcggtcgtgccggccgcacggga
ccgggccactgctaccggctgtactcgtcggccgtctacgaggagaactttgccgagttt
gccgagcccgagattctgcggatgcccattgaaggcgtcgtgctgcagctcaagtcgatg
cacgtgcccagcatcagcgcgttcccgttcccgacgccgccggacacgggcagcatcctg
cgcgccgagcggctgctgatgtacctctcggcggctagcaagacggacgacgacgccgcg
ggccgccgccgcgcgattacgccgctgggccagctgatgagcgcgtttccgctgtcgccg
cggtttgccaagatcctgatggtcggccacccgggcggctgcatccactacgtgattgcg
ctggtggcggccctgtcggcggacgaggtgtttgtgcggcccaacaatgccattcccgca
gcgtcggcgacggccaagtcgccggcggacagggaggaggacggcgagcatgccgacagc
gacgccgagacgacgaagccccgtgttcggacgcaagaggacattcggcaggacgaggcg
cgccggcggacggccgagctcttccgcaaggtgcaccggcagttcacgtcgctcgacgac
aagtcggacgcgctcaagctgctgcaggtcgtgggcgagttctcgcacgagccgacggag
gcctggtgccggggccactttgtgcactacaaggcgctgcgcgaggtccagaagatgcgc
cgccaaatcaccaacctgctgcgcaccaacgtgcccgtgcacgccgccgccaacctgacg
taccaggagcagctgccgcggccgacggacgtgcagatccggctgctcaagcagatggtc
gcggccggctttcccgagaacattgccctgcgggccgatctgtcgccgaatccgccgcag
tacaccaacgcgggcggcgctgtccacaagccgcgccgggccatcgaggtgccgtaccgc
acgctgttcccggtgccgtccgatggcggtgccagcggcgggggccacgcgtcgcggacc
gagtttgtctacatccacccgtcgtcgccgctcgcccacatgaccgtcgccgagtgcccg
cagtacgttgtctactcgcacctgcagcgcaccgcgcccagcccggacatggacgcggcg
gtgtcgctgcccaaggtgcgcatgcgggcgctgacggacatttcgggcctccagctggcc
agcctgctccaggggacgccgctgctcgcgtacggcaagcccatcaaggagacgttccgg
tccgacgacggccgcgagcgcgagtgctgggtggtgccgacgctgcaggcggacgacggc
agcggcgtcggcggcatgggctggccgttgccggccattaaagtgcggcagcgcaaggtg
ccggggcagggctgggagatggtagggaagtag
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