Sporothrix schenckii: SPSK_02340
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Entry
SPSK_02340 CDS
T05555
Name
(RefSeq) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssck03016
]
SPSK_02340
Enzymes [BR:
ssck01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SPSK_02340
Transfer RNA biogenesis [BR:
ssck03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPSK_02340
Prokaryotic type
SPSK_02340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
27664489
NCBI-ProteinID:
XP_016589197
UniProt:
A0A0F2MEE1
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MAGDGEGGGSGGPKHSHNYRGANKHRSGGHGGHSGHGAKPKDNGTWRKDNRPVKRRRLHG
GRNAENAENADNGENGDEKMWEARPSNMSIPFSAEEIAAEGRRPKRKVAVMIGYAGTGYR
GMQINHDEKTIEGDLFAAFVAAGAIAKANADDPKKSSLVRCARTDKGVHAAGNVISLKLI
VEDADVVDKINAALPAQIRVWGIQRTINSFSCYQACDSRWYEYLLPSYALLPPHPESFLG
REMVSWSTKADEEAATAAAGDAVDGEKTDQSVFAGMMERLDDVKDFWPTVDREVVAPILN
ALSPEVRRLVTERLHAGDDVSLVTQNDIENVEHAEADGPTGATETETTETTETTETTETT
EEAVAEATAEAVTETTANTDGETDATAEPTTTVPSHKLAVEQALRDIKAAYMAAKRAYRV
TPQRLQRLQEALTQFEGTRNFHNYTIQKAHGDASAKRHIKSFVVNPAPIQIRDTQWLSLK
VHGQSFMMHQIRKMVAMAVMVSRCGTDPAPAMALSYGPRRISIPRAPGFGLLLERPVFDS
YNARAQSNFGKAPLDFGVYETELRAFKDSQIYGRIWDVEETQNVFHAFFHQLDNFRTSYY
LWAVPGGYKAAFERFGGQGGSKDGARGAGGPSDLLEDPDEDAENPDEGEG
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgacggtgaaggaggcggcagcggtggccccaaacacagccacaactaccgc
ggcgccaacaagcaccgcagcggcggccacggcggccacagcggccacggcgccaagccc
aaggacaacggcacctggcgcaaggacaaccggccggtcaagcggcggcgcctgcatggc
ggccgcaacgcggagaatgcggagaatgcagacaacggcgaaaacggagacgaaaaaatg
tgggaggcgcggccgtccaacatgagcatccccttttcggcggaggaaattgccgccgag
ggccggcggccgaagcggaaggtggcggtcatgattggctacgcgggcacgggctaccgc
ggcatgcagatcaaccacgacgagaagacgattgaaggcgacctgtttgcggcgtttgtg
gcggcgggcgcgattgccaaggccaacgcggacgaccccaagaagtcgagcctcgtgcgg
tgcgcgcggacggacaagggcgtgcacgcagcgggcaacgtgatttcgctgaagctgatt
gtcgaggacgcggacgtggtggacaagatcaacgcggcgctgccggcgcagatccgcgtg
tggggcatacagcggacgatcaacagcttcagctgctaccaggcgtgcgactcgcggtgg
tacgagtacctgctgccgagctacgcgctgctgccgccgcatccagagagtttcctgggg
cgggagatggtgtcatggtccaccaaggccgacgaggaggcggcgacggcagcagctggc
gatgctgttgatggcgagaagacggaccagtctgtctttgcaggcatgatggagcggctg
gacgacgtcaaggacttttggccgacggtggatcgcgaggtggtggcgccgattctgaac
gcactgagccccgaggtgcggcggctggtgacggagcgcctgcacgcgggcgacgacgta
tcgttggtcacacaaaatgacattgaaaacgtcgagcacgccgaggcggatgggcccact
ggggccacggagacggagacgacggagacgacggagacgacggagacgacggagacgacg
gaggaggctgttgcggaggcaacggctgaggcggtgacggagacgacggccaacacagac
ggcgaaaccgacgcgaccgccgaacccacgacgacggtgcccagccacaagctggcggtc
gaacaggcgctgcgcgacatcaaggccgcgtacatggccgccaagcgcgcgtaccgcgtg
acgccgcagcggctgcagcggctgcaggaggcgctgacgcagtttgagggcacgcgcaac
ttccacaactacacgatccagaaagcgcacggcgacgcgtcggccaagcggcacatcaag
tcgtttgtggtcaacccggcgccgatccagatccgcgacacgcagtggctctcgctcaaa
gtgcacgggcagagcttcatgatgcaccagatccgcaagatggtggccatggccgtcatg
gtgtcgcgctgcggcacggacccggcgccggccatggcgctgagctacggcccgcggcgc
atcagcatcccgcgcgcgcccgggttcggcctgctgctggagcggccggtgtttgacagt
tacaatgcgcgcgcgcagtccaactttggcaaggcgccgctcgactttggcgtgtacgag
acggagctgcgggcgttcaaggacagccagatctacgggcgcatctgggacgtggaggag
acgcagaacgtgttccacgccttcttccaccagctggacaacttccgcacgagctattat
ctgtgggcggtgccgggcggctacaaggccgcctttgagcggtttggcgggcagggcggc
agcaaggacggcgcacgtggtgctggcgggccgtcggatcttctcgaggaccctgacgag
gacgccgagaaccccgacgagggtgaggggtaa
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