Sporothrix schenckii: SPSK_02553
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Entry
SPSK_02553 CDS
T05555
Name
(RefSeq) nuclear pore complex protein Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
ssck
Sporothrix schenckii
Pathway
ssck03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPSK_02553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_02553
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPSK_02553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_57_C
Nucleoporin_FG
Adhesin_P1_N
TraV
VPS13_N
Motif
Other DBs
NCBI-GeneID:
27664699
NCBI-ProteinID:
XP_016588803
UniProt:
A0A0F2M913
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MSLFGAKPATGGLFGGSTTAAASPFGQSAATTQPQTGGLFGASTQTAQQPAGGLFGGGAQ
QQQQQQPQLGSSLFGGSTFNTAQQQQQQQQQQQQQQQQQQQQQQQLQQSVNQSSLWGTSV
WQPGQPVAPLEKPIPDQIATLIGKWKPDNPNTVFKEYFYNKVDENRVPFFQPQAHENPRE
WEEALQNKPAPGYLPVLCTGFDGLATRLQLQRRTVATFNAGLHEINTKLDAILSQHDLQT
SVRALAARRRHNELSKRCLALAAKTQVLRNRGYALSGDEDDLKQKLAALEKTMQDPALSA
RMEELWSRLIVLRNYADALRVEVNKRGIKEEEGLGEEIEAKAKKIVEDYEKQLQHLKKEV
DQINTDFDVWQKEQK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgttcggggccaagcccgccaccggtggcttgtttggcggcagcacgactgct
gcggcgtccccctttggccaatcggcggcgacgacccagccgcaaacaggcggtctcttt
ggagcttcgacacagacggcacagcaaccagcaggcgggctgtttggcggaggagcacag
cagcagcagcagcagcagccacagctcggatcgagtttgtttggcggctccacgttcaac
acagcccagcagcaacagcagcagcagcagcagcaacaacaacaacaacaacaacagcag
caacagcaacaacagctgcagcagtctgtcaaccagtcaagtctctggggcacatctgta
tggcagcccggccagccagttgcacctctcgaaaagcccattcccgaccagattgctacg
ctcattggcaaatggaagcccgacaacccaaacaccgtcttcaaagagtacttttacaac
aaggtcgacgagaaccgcgtcccgttcttccaaccccaggcccacgagaacccccgcgag
tgggaggaggccctccagaacaagcccgcgccgggctacctccctgttctgtgcacgggc
tttgatggcctggccacccgtctccagctgcagcgccgcaccgtcgccaccttcaacgcc
ggcctgcacgagatcaacaccaagctcgacgccatcctgtcgcagcacgacctgcagacg
agcgtgcgcgccctcgcggcacgccggcgccacaacgagctgagcaagcggtgcctggcg
ctcgcggccaagacgcaggtgctgcgcaatcgcgggtacgcgctgtcaggcgacgaggac
gacctcaagcagaagctggcggcgctcgagaagacgatgcaggacccggcgctgagcgcg
cgtatggaggagctgtggagccggctcattgtgctgcgcaactatgccgacgcgttgcgc
gtggaggtgaacaagcgaggcatcaaggaggaggagggtctcggcgaggagattgaggcc
aaggccaagaagattgtcgaagactacgagaaacagctgcagcacctgaagaaggaggtg
gaccagatcaacaccgactttgacgtgtggcagaaagagcagaagtag
DBGET
integrated database retrieval system
