KEGG   Sporothrix schenckii: SPSK_02819
Entry
SPSK_02819        CDS       T05555                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
ssck  Sporothrix schenckii
Pathway
ssck03018  RNA degradation
ssck03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPSK_02819
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPSK_02819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssck03019]
    SPSK_02819
   03041 Spliceosome [BR:ssck03041]
    SPSK_02819
Messenger RNA biogenesis [BR:ssck03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPSK_02819
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SPSK_02819
Spliceosome [BR:ssck03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SPSK_02819
SSDB
Motif
Pfam: LSM Gemin6
Other DBs
NCBI-GeneID: 27664959
NCBI-ProteinID: XP_016589276
UniProt: A0A0F2MCP1
LinkDB
Position
Unknown
AA seq 100 aa
MAALLNNYLEKKVLVLTVDSRILVGTLASIDNSTNLVLLGTIERVINTPDDDEASAEVPL
GLYLVRGDNVCSIGLVDEQLDASIDWTKVRGHVIGTTKHI
NT seq 303 nt   +upstreamnt  +downstreamnt
atggcggccctcttgaacaactacctagagaaaaaagtcctcgttctcacagtcgactcg
cgcatcctcgttggcactctcgccagcatcgacaactcgaccaacttggtgttgctgggc
acaattgagcgtgttatcaacacgcccgacgacgacgaggcgtctgctgaggtgcccctt
gggctgtacctcgtgcgtggcgacaacgtgtgcagcatcggcttggtggacgagcagctg
gacgcgtcgattgactggacaaaggtgcgcgggcacgtcattggaacgacgaagcacata
tag

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