Sporothrix schenckii: SPSK_02949
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Entry
SPSK_02949 CDS
T05555
Name
(RefSeq) DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ssck
Sporothrix schenckii
Pathway
ssck03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SPSK_02949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssck03400
]
SPSK_02949
DNA repair and recombination proteins [BR:
ssck03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SPSK_02949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
AAA_27
AAA_29
AAA_21
Motif
Other DBs
NCBI-GeneID:
27665072
NCBI-ProteinID:
XP_016585079
UniProt:
A0A0F2LY69
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MADARTPARLPTRKAVAPSTGKQQSILGFFAKTPSTVRPSASKPPRSATATADDDNDGTA
LSSPCLRETKANPRVSSRAAQITPLPSSDPAEPSSSQENATTPLDASTKVPKTDVLPSPF
TPAETAQKSANRLAVPTSSPTRKARKQISYAESSDEEDDVFVAMNANQRRHRNRTRTVAD
DDEDYASGGVEDVAADEDDDMADFVVSDEESDAPSKAKKRKRPSKADAPRKRPTPTPTPV
KDENYDDFDEELFNEVPSTSTAQKWRFDPDNVQASEPRSTATASARTSTTAASTAKAGKE
KAHTKEPEDRYTWLANVRDMDKNEPGHPDFDKGTIYIPPNAWHKFSPFEKQYWEIKQKLY
DTILFFKKGKFYELYENDATIGHQLFDFKMTDRVNMRMVGVPESSLDIWVNQFVSKGYKV
ARVDQMESALGKEMRERGASSVPKSKQDKIIRRELACVLTRGTLVDGSMLQDDMATYCAA
IKQGMVDDKPVFGVAFVDAATGQFFLSEFEDDVDLTKFETFVAQTAPQELLLEKSHLSTK
ALRILKNNTTPMTIWNYRKPGAEFWDDEMTRRELESGDYFVDEEGTAKAPADWPQKMQEM
REKPFLMSAFGALVNYLRGLKLERNLLSQSNFEWYNPIHRNGTLILDGQTLINLEIFANT
VNGGPEGTLFNLLNRCITPFGKRLFRKWVCHPLCNIQKINERLDAVDMLNADRTLRDQFS
AEMSKMPDLERLGSRIHAGAVRPEDFVRVLEGYEHIEYTTSLLRAFSGGNSIVDQLVAAM
PDLNEPLAYWKTAFDRKRAREEKVLIPERGIDEDFDTCCDTIERIKGDLHTLLDEQKNML
KCRSLKFTDVGKEIYQVEVPKSIKVPKTWRQMSATSAVKRYYFNELTDLVRELQEAEETR
LQMVREVALRFCARFDADADIWLEATRIIAQLDCLISLAKASSSMGQPSCRPVFVDEDRS
VVEFEELRHPCMINAVDDFIPNDVRLGGDAAKINLLTGANAAGKSTILRMSCIAVIMAQI
GCYVPAVAARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELG
RGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFENHPEIRAKRMQIHVDDANR
QVTFLYKLEDGVAEGSFGMHCAAMCGIPTKVITDAEVAAREWEHTSRLKDSLDRAKTGCY
IPLGILSDVAALLRPDGEAAGANDKAMDRNSVEVLLQAIEAL
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgctcgcacgccggcacggctgcctacccgtaaggcggtggcgccgtcgacc
ggcaagcaacagagcatcctcggcttctttgcaaagacaccctcaactgtccgcccatcg
gcatcgaagccgccccgcagtgccacagctaccgccgacgacgacaacgacggcacggct
ctctcctcgccctgcctgcgtgagactaaggccaacccacgtgtgtcctctcgtgccgcc
cagatcacgccgctgcccagcagcgatcctgccgagccatcgagctcccaggaaaacgcg
accaccccgttggacgcctcgaccaaggtaccgaagaccgacgtcctcccgtctccattt
acacctgctgagacggcacagaagtcggccaaccgtcttgcagtcccgactagcagtccg
acacgcaaggcccggaaacaaatcagttatgcagagtcatccgacgaagaggatgatgtc
tttgtggctatgaatgccaaccaacggcgccaccgcaatcgcacgcggacggtggcagac
gacgacgaggactatgcgtccggcggcgttgaagacgttgctgcagatgaggacgatgat
atggccgattttgtcgtatccgatgaggaatcggatgccccgtccaaggccaagaagcgc
aagcggccatccaaggctgacgcgccccgaaaacggccaacacctacgccgacacccgtc
aaggacgagaattacgatgatttcgacgaggagctcttcaacgaggtgccctcgacatcc
acggcacagaaatggcgcttcgaccccgacaatgtgcaggcatcggagcctagatcaacc
gcaacagcttctgcgcgcacgtcgactaccgcagcctcgactgccaaggctggtaaggag
aaggcgcacaccaaggagcccgaggaccgctacacatggctcgccaacgtccgcgatatg
gacaagaacgagccgggccaccccgacttcgacaaaggcaccatctacattccgcctaat
gcgtggcacaaattttcgccttttgagaaacagtactgggaaatcaagcagaagttgtat
gataccatcctcttcttcaagaagggcaagttctacgaactgtacgagaatgacgccaca
atcggccaccagctgtttgacttcaaaatgactgatcgcgtcaatatgcgaatggtcggt
gtgcccgagagctcgctcgatatttgggtcaatcagttcgtctccaagggctacaaggtc
gcgcgtgtggaccagatggagtccgccctcggcaaggagatgcgcgagcgcggcgcctcg
tccgtcccaaagagcaagcaggacaaaatcatccgccgcgagctggcctgcgtcctgacg
cgtggaacgcttgttgacggcagcatgctgcaggacgacatggccacctattgcgctgcc
atcaagcagggcatggtcgacgacaagcccgtgtttggtgttgcttttgttgacgctgcc
accggccagttcttcttgtccgagttcgaggacgacgtcgacctcaccaagttcgagacg
tttgtcgcccagaccgcgccgcaggagctgcttctcgaaaagtcgcacctgtccaccaag
gctctgcgcatcctcaagaacaacacgacgcccatgaccatttggaactaccgcaaaccg
ggtgccgagttctgggacgacgagatgacgcgacgtgagctcgagagcggcgactacttt
gtcgatgaagagggcacggccaaggcacccgccgactggccacagaagatgcaagagatg
cgcgagaagcccttcctcatgtctgcctttggtgcgctggtcaactacctgcgcggcctc
aagctcgaacgcaacctgctgtcccagtccaactttgagtggtacaatcccatccatcgt
aacggcacgttgatcctggacggccagacgctcatcaacttggagattttcgccaacacc
gtcaatggcggacccgagggcacgctcttcaacctgctcaaccggtgtatcacgccgttt
ggcaagcgcctgttccgcaagtgggtttgccaccctctgtgcaacatccagaagatcaac
gagcgtctcgacgccgtcgacatgctcaacgccgaccgcaccctacgtgaccagttctcg
gccgaaatgagcaagatgcccgacctcgagcgcctcggctcgcgcatccatgcaggggct
gttcgcccagaggactttgtgcgcgtccttgaaggctacgagcacattgagtacacgacc
agcctgctgcgcgcctttagtggcggcaacagcatcgtggaccagcttgtggccgccatg
ccagacctcaacgaaccgcttgcgtactggaagacggcctttgaccgcaagcgcgcccgt
gaggagaaggttctgatccccgaacgtggcatcgacgaggactttgacacgtgctgtgac
acgattgagcgcatcaaaggcgacctgcacactctgctcgacgagcaaaagaacatgctc
aagtgccgctcgctcaagttcaccgatgttggcaaggaaatctaccaagtcgaagtgccc
aagtcgatcaaggtgcccaagacgtggcggcagatgtcggccacgagcgcggtcaagcgc
tactactttaatgagctcacggatctggtgcgcgagctgcaggaggccgaggagacgcgc
ctgcaaatggtccgcgaggttgcgctgcgcttctgtgcccgtttcgatgccgacgccgac
atctggctcgaggcgacgcgcatcattgcccagctcgactgcctcatcagcctggccaag
gcttcgtcctcgatgggccagccgagctgccggcccgtgttcgtggacgaggatcgcagc
gtggtcgagtttgaggagctgcgccacccgtgcatgatcaacgccgtcgacgacttcatt
cccaacgacgtacgcctcggtggtgacgccgccaagatcaatctgctgacgggtgccaac
gcggccggcaagtcgaccattttgagaatgtcgtgcattgccgtcattatggcccagatc
ggatgctacgtccctgccgtcgccgcccgcctcacgcccgtcgaccgcatcatgtcgcgc
ctcggcgccaacgacaacatctttgccgcgcagtccacgttctttgtcgagctgtctgag
accaagaagattctgagcgaggccaccccccgctcgctcgtcattctggacgagctcggc
cgcggcacgtcctcctacgacggcgtcgccgttgcgcaggccgtgctgcatcacgttgcc
agccacattggctgcgtcggcttcttcgcgacgcactaccactcgctggccaccgagttc
gaaaaccacccggaaatccgcgccaagcgcatgcagatccatgtcgacgacgccaaccgc
caggtgacgttcctgtacaagctcgaagacggcgtcgccgagggctcgtttggtatgcac
tgcgcggccatgtgcggcatccccaccaaggtcatcacagatgccgaggtggccgcacgt
gagtgggagcatacgagtcgcctcaaggacagcttggaccgggccaagacgggctgctac
atcccgctgggcatcctgagcgacgtggcggcgctgctgcggccggacggtgaggcggca
ggggccaacgacaaggccatggatcggaacagcgttgaagtgctgctgcaggccattgag
gctttgtaa
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