Sporothrix schenckii: SPSK_03022
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Entry
SPSK_03022 CDS
T05555
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
ssck
Sporothrix schenckii
Pathway
ssck03013
Nucleocytoplasmic transport
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_03022
09122 Translation
03013 Nucleocytoplasmic transport
SPSK_03022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_03022
03041 Spliceosome [BR:
ssck03041
]
SPSK_03022
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
SPSK_03022
Spliceosome [BR:
ssck03041
]
Complex C
Other components
EJC/TREX
SPSK_03022
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SPSK_03022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
T2SSK
Motif
Other DBs
NCBI-GeneID:
27665143
NCBI-ProteinID:
XP_016585000
UniProt:
A0A0F2LZQ4
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MPGLEINSHGIPAVEAIGAYLQELLDHAETVKPDRLLEPTLAKSDFDDIYGHVARIFAGF
DDPNGKKLRQYAIVETAARDIFGELIASTSIDSPDFVRVWNLFDILAILADNVDCDPPLL
FWLVEELLDSQTIAGCRKVFDYLESRRERITAKYFNSTKLVILRSCNDLLRRLSRADDTP
FCGRVFIFLFQVFPLGDKSSVNLRGEYHVENVTTYDETPVTAEAETPAGKTGEEDGGAEK
MDVDEAATATPTGPAADQKPRTDFTALYPVFWSLQTSFSQPKKLFDPDHFSKFKAGMEAT
LATFQQISSQDNSRKQRQLDESRRGVKRKRDKEERELRELKEAKGTREDTKDIEDEQDEL
ADTYNPKYLTSRDLFELEASQTSAVGHIKTSDLTFRRHFLLQALIVMEFLLSLSPKAKEK
LAGTNAPNKSVTYSDQTLSNEDAAWAAKMKHDITDHIKNSNSDGPYFLRMVDTILARDKN
WVRWKIESCPSIERAPISADEFVAAEEGAQRAFGQRRRRSTGNMNSFSLDFLDEEDPEEA
LAELKKPGRSQLSALDAFEREIADEDFEIEMPDSDASKQLAEERKASKTWRALRIVRQTN
LSIFDKIDNDNDVRLIFKTADGSLLEEDEDELDAEADGVTGDAVDGDKLPSDKQAVVLVA
AADDIAVAVAKSLVEQNPGVFGTVGQYTTRPSPAAATESEAAAVGGAKSYFQHLESKAFN
LLLDGDEFIGFGESAGHQYGSRRKQIDVACATGKIPLVLMNYESVDAAQGNAFAARYVFL
KPTGTEAIEPLLKAAGAYEADTDLQVALAEAKEVLDKLGGEGQPTFAKTIDVDDVAAAAT
QLGNYVYGREEATDTDQTMGGVEEAKADAGEFDEDKKKTAPKESGETTNDAAADEAKPAE
PSAEEDASMADAGDDAPENAVANKE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcctcgagatcaacagccacggtatcccggccgtcgaggcgatcggcgcgtac
ctgcaggagctgctcgaccatgccgagaccgtcaagccggaccgactgctcgagccgacg
ctggccaagtcggactttgacgacatctacggccacgtcgcgcgtatctttgccggcttc
gacgatccgaatggcaaaaaactgcggcaatatgcgatcgttgaaacggccgcgcgcgac
atctttggcgagctcattgcctctacgtccatcgactcacccgacttcgtgcgtgtctgg
aacttgtttgacattctggccattctcgccgacaacgtggactgcgacccgccgctgctg
ttttggctcgtcgaggagctactcgacagccagacgatagcaggctgccgcaaggtgttt
gactaccttgaatcgcgccgcgagcgcatcaccgccaagtactttaacagtacaaagctt
gttatcctgcgcagctgcaacgaccttttgcggcgcttatcgcgtgctgatgacacgcca
ttttgtggccgtgtattcattttcctcttccaagtcttcccgctgggcgacaagagctcg
gtcaacctgcgcggcgagtaccacgtcgaaaatgtgacaacatacgacgagacgcccgtc
acggccgaagctgagacgccggcaggaaagactggcgaggaggacggcggtgctgagaag
atggatgtcgacgaggcggcgacagcgacaccaactggccctgccgccgaccaaaaaccc
agaaccgactttaccgccctttaccccgtcttctggtcgctgcagaccagcttcagccag
cccaagaagctgttcgaccctgaccactttagcaagttcaaggccggcatggaggccact
ttggccactttccagcaaatcagcagccaggacaactcgcgcaaacagcggcagctcgac
gagtcacggcggggcgtcaagcgcaagcgggacaaggaggagagagagctcagggaattg
aaagaggccaaggggaccagggaagatacgaaggacattgaagacgagcaggacgagctg
gccgatacgtacaaccccaagtacctcacgagccgggacctgtttgagctggaggcaagt
caaacctcggccgtcggccacataaaaaccagtgacttgaccttccggcgccatttcctg
ttgcaggcgctcattgtcatggagtttttgctgtccctgtcgcccaaggccaaggagaag
ctggcaggaaccaacgcacccaacaagtccgtcacttactctgaccagacgctcagcaat
gaagatgctgcctgggccgcgaagatgaagcacgacatcaccgatcatattaagaatagc
aacagtgatgggccgtacttcttgcgaatggtcgacaccatacttgcgcgcgacaaaaac
tgggtccgctggaagattgagtcgtgtccgtctatcgagcgagcccccatctccgcggac
gagtttgttgccgccgaggagggcgcccagcgcgcttttggccagcgccgtcggcgcagc
accggcaatatgaactccttctcgcttgattttttggacgaggaggatcccgaggaggct
ctggccgagctcaagaaaccgggccgctcccaattgtcggccctcgacgcctttgagcgg
gagattgccgacgaggactttgagattgagatgccagacagcgacgcatcgaaacagctg
gccgaggagcgcaaggccagcaagacgtggcgcgcgctccggattgtgcggcagaccaac
ctttcgatatttgacaagatcgacaatgataacgacgtgcggctgatctttaagacggcc
gatggcagtctcctcgaggaggacgaagacgagctggacgccgaggcggatggcgtgacg
ggcgatgctgtcgacggcgacaagctgccgtctgacaagcaggccgtagtccttgttgcc
gccgccgacgacatcgccgtagcagtcgccaagtcgctggtcgagcagaacccgggtgtt
tttggcactgttggccagtacacgacgcgcccgtcgccagctgctgctaccgagtcggaa
gcagctgcagtcggtggtgccaagagctacttccagcatctcgaatcaaaggcattcaac
ttgcttctcgacggcgatgagtttatcggcttcggcgagtcggctggtcatcagtacggc
tctcgtcggaagcagatcgacgtcgcctgtgctactggcaagattcccctggtactcatg
aactacgagagcgtcgatgctgcccagggaaatgcgtttgctgctcgctacgtcttcctg
aagccgaccggcaccgaggctatcgagcccttactgaaagcggccggcgcatacgaggcc
gacactgacttacaggttgccctagcggaggccaaggaggttctcgacaagctgggaggc
gaaggccagcccacttttgcaaagacgatagacgttgatgacgtggcagccgcagcgacg
cagcttggaaactatgtctacggcagagaagaggccacggatacagaccagacgatgggg
ggcgtggaggaggcaaaggcggatgcaggcgagttcgacgaagataagaaaaagaccgct
ccgaaagaaagtggcgagaccacaaacgacgcggcggccgacgaggccaagccagctgag
ccgagtgcagaagaggacgcctcgatggccgatgcaggcgacgatgctccagagaatgcc
gtggcaaacaaggagtga
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