Sporothrix schenckii: SPSK_03335
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Entry
SPSK_03335 CDS
T05555
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ssck
Sporothrix schenckii
Pathway
ssck03040
Spliceosome
ssck04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_03335
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SPSK_03335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssck03041
]
SPSK_03335
04121 Ubiquitin system [BR:
ssck04121
]
SPSK_03335
03400 DNA repair and recombination proteins [BR:
ssck03400
]
SPSK_03335
Enzymes [BR:
ssck01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SPSK_03335
Spliceosome [BR:
ssck03041
]
Complex B
Other components
Prp19 complex
SPSK_03335
Complex C
Prp19-CDC5 complex
SPSK_03335
Ubiquitin system [BR:
ssck04121
]
Ubiquitin ligases (E3)
U-box type E3
SPSK_03335
DNA repair and recombination proteins [BR:
ssck03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
SPSK_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp19
WD40
ANAPC4_WD40
eIF2A
V_ATPase_I_N
VID27
U-box
zf-Nse
Snx8_BAR_dom
Motif
Other DBs
NCBI-GeneID:
27665450
NCBI-ProteinID:
XP_016584564
UniProt:
A0A0F2LWQ7
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MLCAISGEVPEVPVVSKKTGTVYEKRLIEKYIEEHGTEPGTETELDVEDLLPLKAGRTVR
PRPPTLTSIPALLATFQNEWDALALETYTLQEQLSQTRTELATALYQHDAAIRVIARLTK
ERDDARDSLSRVTVAAASATDGDDDSMAVDNEELPEVLAAAVDETHKTLSKSRKKRGIPA
DWASNEDIAAFAPIASEDLPVVRATALTIEATDSEYAAIAGLEGSVGIFAVVSQKLERMI
EVGEPLTTALWTGSTRIVLGTAKGAIKIYEAGSEKASVKAHAGAVTGLAVHPSGRILASV
GVDKTISLYDLDTATRVSRAHSTASLTACAFQPDGHLLAAGTSTTGEVQVYMTKTGELAT
SFVLGAPVQALAFSENGYWIAATAKGQTTVTIFDLRKEGDAVTAKVLDIGSPVAALAWDY
SGQFLATAGPAGLTVQHYAKGSKKWSQTLSSATPSVAVQWGAHAKQLLSVNADGVVSVVG
KKE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcgccatctccggcgaggtgcccgaggtgccggtcgtctcgaaaaagaccggc
accgtctacgagaagcgcctgattgaaaagtacattgaagaacatggaaccgaaccaggc
acggagacggagctcgatgtcgaggatctgctacccctcaaggccggccgcactgtgcgt
ccgcgaccacccaccctgacatccatcccggcactgcttgcgacgttccaaaacgagtgg
gacgccctagccctcgagacatacacgttgcaggagcagctctcccaaacacgcacggag
ctggcgacggccctgtatcagcacgatgcggcaattcgcgtgatcgcgcgcctaaccaaa
gagcgcgacgacgcgcgagactccttgtcgcgcgtgactgttgctgctgccagcgcgact
gatggcgacgacgactcgatggcagtcgacaacgaggagctgcccgaggtactggccgcg
gccgtggatgaaacgcacaagacgctgtccaagtcacggaagaagagaggcataccggcg
gactgggcgtccaacgaggacattgctgcctttgccccaattgcgtccgaggacttgccc
gtggtccgcgccacggccttgacaatcgaggccaccgacagcgaatatgctgcgattgcc
gggctggagggcagtgtgggcatctttgctgtggtatcacagaagctcgagcgtatgatt
gaggtcggcgagccattgacgacggccttgtggacaggcagcacgcgcatcgtcctgggc
acggcaaagggcgctatcaagatctacgaggcgggttccgagaaagcttcagttaaagca
catgccggcgccgtcactggcttggccgtccacccatcgggacgcattctggcatctgtt
ggtgtcgataagaccatttccctctacgatctggataccgccacccgcgtcagccgcgcc
cacagcaccgcgtcgctgactgcctgtgcttttcaacccgatggccacctgctggctgcc
ggcacgtctaccacgggtgaggtgcaggtctacatgaccaagacgggcgagctggccaca
tcatttgtgctgggggcacctgtgcaggcgctggcgttctcggagaacggctactggatt
gctgccaccgctaagggccagactactgtcactatttttgatttgagaaaggagggcgac
gctgtcacggccaaggtgctggacattggtagccccgtcgccgcgctggcctgggactac
tcgggtcagttcttggccacggccggcccggcggggctcacggtgcagcactacgccaag
ggctccaagaagtggtcgcagacgctgtcgagtgcgacgccttctgtagccgtacagtgg
ggcgcgcacgcaaagcagctgctgtcggtgaatgcagacggcgttgtgtctgtggtaggg
aagaaggagtag
DBGET
integrated database retrieval system
