KEGG   Sporothrix schenckii: SPSK_03457
Entry
SPSK_03457        CDS       T05555                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
ssck  Sporothrix schenckii
Pathway
ssck03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPSK_03457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssck03019]
    SPSK_03457
Messenger RNA biogenesis [BR:ssck03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     SPSK_03457
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 27665572
NCBI-ProteinID: XP_016585457
UniProt: A0A0F2M3P5
LinkDB
Position
Unknown
AA seq 370 aa
MAQQKGQLARPIFAKIAPHEFLVANLARDGQNNQSQQGTRPNGRATDESRDFDVHTGSLS
QAHGSAAVRLGRTRVICGVRGEILPVANIPQFRPSAVTADRSADHAVEADNRRQLRDYDL
LVPNLELATGSAPEFLPGGPPSVLAQVLSTRLYALLHSSGLVDAEALKIWHTPRRAADGA
DGDMDIDEEEPADAEGDGSPRTPEIKAYWTLYIDLLFLSFDGNPLDAAWAAIVAALRDTH
LPHARWDADRDRVVCSPPSVTPAPPLTLRGLPVASTAVVCVENRKRQQRQSSEVAGAHWI
LHDPDRLEEGQCHETVTAVVDCSNGTGKATVVRALSKSGGVLVGPAELHMLVASAETRWT
SLSKALGQGP
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggcacaacaaaagggccaattggcccgccccatcttcgccaagatcgcaccgcacgag
ttcctcgtcgccaacctcgcgcgcgacggccaaaacaaccagagccaacaaggcacccga
ccaaacggccgtgccaccgacgagtcccgcgattttgacgtgcataccggctcgctctcg
caggcccacggcagcgccgccgtccgtctcggccgcacgcgcgttatctgcggcgtgcgt
ggcgagatcctgcctgtcgccaacatcccccagttccgtccatccgccgtcacggccgac
cgctctgcggaccacgccgtggaggccgacaaccgccgccagctgcgcgactacgacttg
ctggtgcccaacctcgagctggcgaccggcagtgcgcccgagttcttgcccggcggcccg
ccgtccgtgctggcccaggtgctgagcacgcggttgtacgccctgctgcacagcagcggc
ctcgtcgacgccgaggcgctcaagatttggcacacgccgcggcgggcggccgatggtgct
gacggagacatggacattgatgaggaggagccggcagacgcagagggcgacggctcccct
cgcacacccgagatcaaggcgtactggacgctctacattgacctgctcttcctctccttt
gacggcaaccccttggacgccgcctgggccgccattgttgccgccctccgagacacacac
ctgccgcacgcccgctgggacgccgaccgcgaccgcgtcgtttgctccccgccctcggtg
acgcccgcgccgcccctgacgctgcgtggcctgcccgtggcgtcgacggccgtggtgtgc
gtcgaaaaccggaaacggcagcagagacagagcagcgaggtggccggtgcgcactggatt
ctgcacgacccggaccggctcgaggagggccagtgccacgagacggtgacggccgtggtc
gactgctccaacggcacgggcaaggccacagtggtgcgcgcgctgtccaagagcggcggc
gtgctcgtggggcccgcggagctgcacatgctcgtggcctcggccgagacgcggtggacg
agtctgtccaaggcattgggacagggtccatga

DBGET integrated database retrieval system