Sporothrix schenckii: SPSK_03839
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Entry
SPSK_03839 CDS
T05555
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ssck
Sporothrix schenckii
Pathway
ssck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPSK_03839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_03839
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SPSK_03839
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SPSK_03839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
FAM195
Motif
Other DBs
NCBI-GeneID:
27665931
NCBI-ProteinID:
XP_016585967
UniProt:
A0A0F2M529
LinkDB
All DBs
Position
Unknown
AA seq
2486 aa
AA seq
DB search
MKAGRCKIALRPVQAIWSRTGKAPTGPASSSGSWSKLQANSGQAATQNLSRARKARTATV
SPQKPPYAAIATAYLPTDTLDSALFSFVYQYFTSFDGYFIDSHRSNQKVKKRHEKRLRKR
DITRGHETTPVAGRRLSSVAAAFARVLPSPVLQPGLRVLFPLLTSVFHPPSDSKTATRFR
PAKASVCRVCDCALPSCRLSVQSLARSRWSVVLLERHFDQQRSSLFFASPSRRGVDTVVH
CTVHQALSILLSLFRDRRVSFSSAAASVFIFDCFSATPRSLPSPVAVLPPSPPPPPPSLL
SLFSSVGHSPHPSQNAALGGSPVTGSPTGTNNVSKIVIAQVYVLLSSLKEEKVDHSKWDQ
LRKLIDENGMDVFTKYFARLVASSASQIFPGFNRPGGSPGSYQLLTTEMQKISHQPDQAR
NIAESIEIGTEEIFRDFDLSTFMEHFKLDALEKTILALAFKLGSRSDLKTKADAILSTNF
PTFVNILSRPGGDHADVDPSFVSLIVDRYIQLHPPTFTNTTKSDLSIKVAQRYENEELGP
PPAVLAALDLMRVLADRPANALANFIHKTGADFTRDEDTALSYLQNRQGQTTEEQVAHAL
TYTAISQTYAFNPSVLVAALRRFVPATFQWQDVISRFDQPGARISASQFLRLYNALAPIA
RDDETISIERLWGGSWENPDSQLSFVYAYASQSPDDLDATTIPNLRSTIAIDEYADAAPE
IRERAAVAAKHPLVSLAAVSAIVHIALASQHASINVEARRLFQAVVIPNLDIFVVSAAMV
PKPWPVTAAETFTSLFEGFLYKRTANWDFVFDSLWRKDRQLHTEQLINAHALHPGDLPDI
FEHCAKHGWLNDLVYLPNGFGLDLVAYAHGQGFVDLTEWAKNNAERNADIARPLLQFLMI
KSELEAQRPDGQQIQPKANVPLKVQTVSALLSILEDYYPTTSPSPDLVMVQRQCIAVYPR
LINYGEGFDDIIEESEKAGHALPQEANAKMEEHFKKMYSNEIEVREVVRIMEHYKHSRDR
LEQDIFACMINSLFEEYSHFGDYPLEALATTAVLFGGLMSHKLISDLPLKVGLGMILEAV
RDHQQDHPMFKFGMQALMQLYSRFREWPGFCRQLLQCKSLQGTEAWKKASDVVREAEEEA
RGAGGHDEALTNGNGDDDDGSEQPPFVSINVDPLPPNIPFEDPDPDAQGKIQFVLNNITA
NTLQSMFQEIRPMVDVKHQQWFASHLVEERAKMQPNYHKVYLQLVSHFEDRMLWAEVLRE
TYVSVSRMLNSEATMQNSTERSHLKNLGGWLGLLTLARDKPIRHRNIAFKQLLIEAHDTK
RLIVVIPFVCKVLSQGEHSNVFKPPNPWLMDIIHFLIDLYHNAELKLNLKFEIEVLCQTL
SIDHKSIEPSGEILNRVAMETDMPHDGLDAFENLSLNGIGHAGVGAAGSLAGHGMVPGVV
SNSMVAMIPERITKVHVPPVSEMVVSQTRLEEIVRNALVQALQDIIQQVVDRSVAIAAIA
TQQMIHKDFAIEPDENRLRTSAVSMAKATAGSLALVTSKEPLRANFTNYMRTLSSDLPQG
LPEGTIIMCVNSNLDYASSVIEKATEDRAAYEIEDMIEPEIEARRRHRLQRPNEPYMDPG
LSRWAMTIPSPYKLSPSVSGLNNDQMAIYDDFARHPRPTTASAAASAAHNASASDTTRSL
ANDVLQDQYSSLASLPPAAETPSVASVGSQLQGYPQLHGGANVAAGGVNGGLMNGGGRQA
GPGVDTRALADRIGKLIMELQRSATDAIEEHFSELPRPHPVLDIIDALIQTIIKAQPTFE
DFAIYAADQVCPMLFNHNLEDSLAFESLVHVLESLRKIVGIPVTNRIAQFFQAQPGQAFL
RLPLISVLLPTGLLDWSVIDNAMAVTLKQRKEGSIVFFTRLLELTLIRDAPQVLYYAQFI
NSLAEAWAWVQEEPEVPGGQEFKTKIVTQGAQPSHPEAEDASGELTPQRKDQIEYVFDEW
VLVCQKPGIPENIPFIFVEQMRARGIIANRDDLYVFVRIAIDRSVERCEVSAQAGESVND
GFAAIDSVARLIAMFVQACGTESDAAVPEGRSPRAELLDSILALGTMILNHHYVQRGDMY
NQRVFFRFFSMLLVSINNVSEHLSDTDRNEILGRFATRFNDLGPTTFPYFVYGWAELIKH
RIFMPSLLRATGNDGWASYTKILKQLLSFTSEQLKVPDSANIARELSRAALKLVLIIYHD
FPDYLAANHVELCQSLPPYLVQPLNIVLFANPTSMPKPPDPTMPGLRLDQMEEASMVPNG
RYQPGPLLSSMGLTALLDQALQSGPSEEVVAHVKYAMSKTEAKSASTTWGRVAISTNVPV
VDAVVAYIANHVAARVSGGGPVFTAGGPDVATLSMILHELSAEGRYYLICSIVNQLRFPN
AHTNFFALALLEIFGHDMSDPEETDIRQQICRVLFERIVNYWPQPWGLLAVIAELVKNEK
FFFFELPFIKMAPDVSERFAAVANRA
NT seq
7461 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagggagatgcaagattgccctccgccctgtgcaggcgatctggtcgcgcaca
gggaaggcaccgactgggccagcaagctccagcggcagttggtccaagctccaggccaat
agcgggcaggcagcaacgcagaatcttagtagggcgcggaaggcgcgcacagcgactgtc
agtccgcaaaagcccccatacgccgccatcgccaccgcgtacctcccgaccgacacactc
gattctgctttgttttcgttcgtgtaccaatatttcacatcgtttgacgggtattttatt
gattcccaccggagcaaccaaaaggtaaaaaaaaggcacgagaaaaggctgagaaagcga
gacatcacacgagggcacgagacaacccccgtcgctggccgtcgattgtcgagtgttgca
gcggccttcgcgcgtgtgctaccgtcgccggtgttgcaaccggggctgcgtgtcttgttc
cccctcctcacatcagtcttccaccctccctccgacagcaaaactgcgacccgattccgt
cccgcgaaggcctctgtctgcagagtctgcgactgcgcgttgccatcctgccgcctgtct
gtccaatcgcttgcccgttcgcgctggtccgtggtcctcctcgagcgtcatttcgatcag
cagcgatcatcactattctttgcatctccatctcgtcgcggcgttgatacggttgtgcat
tgcactgtccatcaggccctgtccattctcctctctctttttcgtgaccgccgtgtctcg
ttctcctcggccgctgcatcagttttcatattcgactgcttctccgccacgcctcgatcg
ttgccttctcctgtcgccgtccttccgccgtcccctcctcctcctcctccttccctcctc
tctcttttctcttccgtcggccattctccgcatccatcccagaacgcggctctgggtggc
agtcccgtcaccggcagtccgaccgggacgaacaacgtctcgaagattgttattgctcag
gtgtatgtcctcctcagcagcctgaaggaggagaaagtcgaccattcaaagtgggaccag
ctacgaaagctcatcgatgagaacggcatggacgtgtttaccaaatacttcgcccgtctt
gtagctagtagtgcatcccagatattccccggctttaaccggccggggggtagtccggga
tcctaccagctcctgacgacggaaatgcaaaagatctcgcaccagccagaccaggcccgc
aacattgccgagtccatcgagattggcaccgaggagatcttccgtgactttgatctttcg
acgttcatggagcatttcaagctcgatgcccttgaaaagaccatcctagcccttgccttt
aagcttggctcccgttccgatctcaaaacaaaggccgacgctatcctttcgacaaacttc
cccacgtttgtcaacatcctgtccagacctggcggcgatcatgctgatgtcgatcccagc
ttcgtctccctcatcgtcgaccgatacatccagctccaccctcccaccttcaccaacacc
acaaagtccgatctgtctataaaagtcgcgcaacgatacgagaacgaggagctgggcccg
ccgcctgcggtcctggccgctctcgatttgatgcgcgtcttggccgaccggcccgccaac
gcacttgccaactttattcacaagaccggtgccgacttcacccgcgatgaggacaccgcg
ctctcctacctccaaaaccgccagggacagaccactgaagagcaggtcgcccatgccttg
acatacactgccatcagccaaacatacgctttcaacccatcggtcctcgtcgctgcgctg
cggcgctttgtgccggccacgttccagtggcaggacgtcatcagccggttcgaccagccg
ggcgcacgcatctctgcgtcccagttccttcgcctctacaatgcgctcgcccccattgcc
cgcgacgacgagacgatcagcattgagcgactatggggcggcagctgggagaaccccgac
tcccagctctcctttgtgtacgcctatgcgtcacagtcgcccgacgacctcgatgccacg
accatacccaacctccgttccacaattgccattgacgagtatgccgacgccgctcccgag
atccgcgagcgcgccgccgttgccgccaagcaccccctcgtctcgctcgccgccgtttct
gccattgtccatatcgccctcgcctcccagcacgctagcattaatgttgaggcgcgcagg
ttattccaggcggtggtcatcccgaacctcgatatctttgttgtgtcggccgccatggtc
cccaagccatggccggtcaccgccgccgagactttcacgtcactcttcgaaggcttcctg
tataagcggacagcaaactgggactttgtgtttgatagtctctggcgcaaagacagacag
ctgcatacagagcagctcatcaacgcgcacgcgttgcaccccggcgacctccccgacatt
ttcgagcactgtgcgaagcacggctggctgaacgacctcgtctacctgcccaacggattt
ggcctagacttggtagcatatgcccatggtcaggggtttgtcgatttgacggagtgggcc
aagaacaatgcagagcggaacgccgacattgctcggccgctgttgcagttcctcatgata
aagtcggaactcgaggcccaacggcccgacggtcagcagattcagcccaaggctaacgtt
cccctgaaggtgcagaccgtgtcggccctgctcagcattctagaggactactacccgacg
acaagccctagcccagacctcgtcatggtccagcgccagtgcattgccgtttacccccgc
ctcatcaactacggcgaaggctttgacgacatcattgaggagagcgaaaaggccggccac
gcgctcccgcaggaggccaacgccaagatggaggagcatttcaagaagatgtacagcaac
gagatcgaggtccgcgaggtcgtccgcatcatggagcactacaagcactcgcgcgaccgg
cttgaacaggacatctttgcctgcatgatcaacagcctgtttgaggagtacagccacttc
ggcgactaccccttagaggcgctggccaccaccgccgtgctctttggtggtctcatgtcg
cacaagctcatctcagacttgccgctcaaggtcggcttgggtatgatcctcgaggccgtc
cgggaccaccaacaggaccaccccatgttcaagtttggtatgcaggcgttgatgcagctc
tactcccgcttccgcgagtggccgggcttctgccgccagcttctgcagtgcaagagcctg
cagggcaccgaagcttggaagaaggcgagcgatgtggtccgcgaggccgaggaggaagca
cgcggcgccggcggccacgatgaggccctcacaaacggcaacggcgacgacgacgacggc
tctgagcagccgccctttgtctccatcaacgtcgaccctcttccacccaacatccccttt
gaagaccccgacccggatgcccagggcaagattcagtttgtgctcaacaatatcacggcg
aacactctgcagtccatgttccaggagatccgccccatggtcgacgtgaagcaccagcag
tggtttgccagccaccttgtcgaggagcgcgccaagatgcagcccaactaccacaaggta
tatctgcagcttgtgagccactttgaggaccgcatgttgtgggctgaagtgctccgcgag
acctacgtcagcgtgtcgcgcatgctcaactcggaggcgacgatgcagaactcgacggaa
cgctcgcatctcaagaacctgggtggctggctgggcctcctgacgcttgcccgggacaag
cccatccgccaccgcaatattgccttcaagcagctgctgattgaggcccacgacacgaag
cgcctgattgtcgttatcccctttgtctgcaaggtcctcagccagggcgagcattccaac
gtgttcaagccgccgaatccgtggttgatggatatcatccacttcctcatcgacctgtac
cacaacgccgagctcaagctgaacctcaagtttgagattgaggttctctgccagaccttg
agcatcgaccacaagagcatcgaaccctcgggcgagattctcaaccgcgtcgccatggag
accgacatgccgcacgacggcctcgatgcgtttgagaacctctcgctcaacggcatcggc
cacgccggcgttggtgcggctggcagcctggctggccacggcatggtgccgggcgttgtg
tccaacagcatggtcgcgatgatacccgagcgcatcacaaaggtgcatgtgccgcccgtc
agcgagatggtcgtcagccagacccgcctcgaggagattgtgcgcaacgcgctcgtccag
gctctccaggacattatccagcaagtggtcgaccggtcagtggcgattgccgctattgcg
acgcagcagatgatccacaaggactttgccatcgagcctgacgagaaccgtctccgcacg
tcggcggtgagcatggccaaggccactgcgggcagcctcgcccttgttacctccaaggag
cccctgcgtgccaactttaccaactacatgcgcacgctctccagcgacctgccgcagggc
ctgcccgaaggaaccatcattatgtgcgtcaactccaacttggactacgcgtcgagcgtg
atcgaaaaggccaccgaggaccgcgccgcgtatgagattgaggacatgatcgagcccgag
atcgaggcgcgccgacgccaccgcctccagcgccccaacgagccgtacatggacccgggc
ctgagccgctgggccatgaccatcccgagcccgtacaagctcagccccagcgtcagcggc
ctcaacaacgaccagatggccatctacgacgactttgctcgccacccgcggccgacgacg
gcttcggccgccgcctcggctgcgcacaacgcctcggcatccgacaccacgcggtcgctc
gccaacgacgtcctccaggaccagtacagctcgcttgctagccttccgccggcggccgag
accccgtctgttgcatccgtcggctcacagctgcagggctacccgcagcttcacgggggt
gccaacgtggcggccggcggcgtcaacggtggcctgatgaacggcggcggccggcaggcc
ggcccgggcgtggatacccgggctcttgctgaccgcatcggtaagctgattatggaactg
cagcgctccgccacagacgccattgaggagcacttctcggagctgccccgcccgcacccc
gtgctggacattatcgacgccttgatacagaccatcatcaaggcgcagccgacgttcgag
gactttgccatctatgcggcggaccaggtctgccccatgctgttcaaccacaacctcgag
gacagcctggcgtttgagagtctggtgcacgtcctggagtcgctccgtaagattgtcggc
atccccgtcaccaaccgcattgcccagttcttccaggcgcagcccggccaggcgttcctg
cgcctgcccctcatctcggtgctgctgcccacgggactcttggactggtccgtcattgac
aacgccatggcggtgactctgaagcaaagaaaggagggctccatcgtcttcttcacgcgc
ctgctcgagctcacgctcattcgcgacgccccgcaggttctgtattatgcgcagttcatc
aacagcttggccgaggcgtgggcatgggtccaggaggagcccgaggtgccgggcggccag
gagttcaagaccaaaatcgtcacccagggcgcgcagccgtcgcaccccgaggccgaggac
gcgtccggcgagctcacgccacagcgcaaggaccagatcgagtacgtgtttgacgaatgg
gtgcttgtgtgccagaagcccggcatccccgagaacatcccctttatctttgtggagcag
atgcgcgcgcgcggcatcattgcgaaccgcgacgatctttatgtcttcgtgcgcatcgcc
attgaccggtctgtggagcggtgcgaggtcagcgcacaggcgggcgagagtgtcaacgac
gggttcgccgcgatcgactctgtggccaggctgattgctatgttcgtgcaggcctgcggt
accgagagcgacgcggcggtgcccgagggccggtcgccgcgcgccgagctgctcgactcc
atcctggccctaggcacgatgatcctcaaccaccactatgtgcagcgcggcgacatgtac
aaccagcgcgtgttcttccggttcttctcgatgctgctcgtctcgatcaacaacgtgtcg
gagcatctatcggacacggaccggaacgagatcctgggccggtttgcgacgcgcttcaac
gatctgggcccgaccacgttcccgtactttgtgtacggctgggcggagctgatcaagcac
cggatcttcatgccgtcgcttctgcgcgctaccggtaacgacggctgggcgtcgtacacc
aagatcctgaagcagctgctgtcgttcacaagcgagcagctcaaggtgcccgacagcgcc
aacattgcgcgcgagctttcgcgggcggcgctgaagctggtcctcatcatctaccatgac
ttccccgactacctggcggccaaccacgtcgagctctgccagagcctgccgccgtacctc
gtgcagcctctcaacattgtgctgtttgcgaacccgacgtcgatgccgaagccgccggac
ccgacgatgcccggcctgcggctcgaccaaatggaggaggccagcatggtccccaacggg
cggtaccagccgggcccgctgctgtcgtctatgggcctgacggcgctgctggaccaggcg
ctgcagtccgggccgtccgaagaggtggtggcgcacgtcaagtacgcgatgagcaagacg
gaggcgaagagcgccagcacgacctggggccgcgtggcgatctcgaccaacgtgcccgtg
gtcgacgcggtcgtggcgtacattgccaaccatgtggcggcgcgggtgtcgggcggtggt
cccgtgttcacggcgggcgggccggatgtggcgacgctgtcgatgattctgcacgagctc
tcggccgagggccgatactacctgatctgcagcattgtcaaccagctgcggttccccaac
gcacacaccaacttcttcgcactggcgctgctggagatctttgggcacgacatgtcggac
ccggaagagacggacattcggcagcagatttgccgtgtgctgtttgagcgcattgtcaac
tactggccgcagccgtggggcctgctggcggtgattgccgagctagtcaagaacgaaaag
ttctttttctttgagctgccgttcatcaagatggcgccggacgtgtcggagcggttcgcc
gccgtggccaaccgggcctag
DBGET
integrated database retrieval system
