Sporothrix schenckii: SPSK_03867
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Entry
SPSK_03867 CDS
T05555
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_03867
03036 Chromosome and associated proteins [BR:
ssck03036
]
SPSK_03867
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SPSK_03867
Chromosome and associated proteins [BR:
ssck03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
SPSK_03867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_9
SH2
HHH_3
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
27665959
NCBI-ProteinID:
XP_016585823
UniProt:
A0A0F2M0B5
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MSRRDDFIQGEAELGSEEDDESFDGEEDEDEDESQSRRRERPSRIEDSSEEEDDDDDEEE
AAKIREGFIVDESEEDDDDGDDDTGRERKRRKKRRRAEREEEAQLDEEDLDLIGESRPDW
ERQAAAQPKFKRLKRGHRDEDGPRSERPDLAKIFSDEEDEDDDDAAAAGRYARPAHRGVD
EMDDFIEEDFPEDEDERLRRQEDLEVARPRERFIGGVIDTTGLDKDALDDMDKIFGDGGD
YAWVFEIEDEEEDRDLGEQGIELKDVFEPSQLQEKLMTDSDNAIRYTDEPERFQIDRKPF
RNLQITPEQFKEEARWVINLMWPTKLLPQSLHEPFSKAVGKVLEFFVVDDVEVPYVFQHR
KDYLIHAKPRRSGRDGRDDRDDGGDYDVSAEKLLNQDDLWRILELDIRFRSLIEKRNSLD
KTYDSLRASSHRVDDPVFEALVGQASTMEELQELQDYLNFQYAAQLRELAAESSAANGKA
GDKDHSNGAGAGAAVVTKRPGAKSTTLFERTRKAKAHAFTAAYGISVDRLAQNALRISKK
TSAEDPAKLPVDLADSLTDDTYATADAVIQAARALYAEELYVSPRLRKHFRVAYYQNGLV
SCHRTDKGLRRIDEAHPFYEIKYLINQTLADMARRPDVFLKMMRAEEDGLVEVRLVLQNE
REFRRQLYTEFASDNFSELADAWNDERQKVLDLAFPKLDKIIAKGVKDSLRTACQDEVLK
SCRDEYSKRLDQAPFKPKGLVLGTPPRVLTLSNGRGDPSREPVFWTWVEEDGRVLEHGRF
GNLARDEAQRDAFAEVVKRRRPDVVGVSGFSADTHKLLKDLESLISEKGLMGPEYDDPET
NDYRSDLLEVVIVNDEVARLYKDSPRAVAEHPSLNSMLRYCVALARYLQNPMKEYAALGK
DVQSLVFHPCQHLLPAERLAKALESAMVDMVNLCGVDINEAVSDAYTANLLPYVSGLGPR
KATAVIKGINANGGSVTSRDELVGDPDSGKLAVVGPRVWNNCASFLYIEYDSSNLLSDPL
DNTRVHPEDYELGRKMAADALELDEEDVKAEVDDNGPGAIVRKLFKEEEQEKVNELILEE
YAEQLVMKYNQRKRATLETIRAELQAPYEELRHKFMTLPPDVVFTMFTGETKDSLCEGMI
VPVYVRVVKDDFAIVKLDCGMEGRIEAHEAPLSSRGGGSGLRDALRVGQTAQAKLLELNR
KDFISKLSVREDALRRPFRKFVDHERGTWDFRQEDQDREDLKEKDKTTGRTQRVIKHPLF
RPFNATQAEEYLGSQAVGDMVIRPSSRGNDHLVVTWKVADGVYEHIDVLELQKDNEFSVG
RLLRIGGKYSYTDLDELIVEHVKAMAKKVGEMTRNEKFQPGTRADTEKWLTTYMDANPNR
SSYAFCTDTKHPGYFFLCFKVNRNTRVNFWPVRVIPKGFEMLKVAYPDMRALTNGFKMRY
QNEILKMQQNGGR
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgagccgacgcgacgacttcatccagggcgaggccgaacttggctccgaggaggacgac
gagtcctttgatggcgaggaggacgaggacgaggatgaaagccagtcccggagacgagag
cggccgtcgcgcattgaagactcgagcgaggaggaagacgacgacgacgacgaagaagag
gccgccaagatccgcgaaggctttatcgtcgacgagagcgaagaggacgacgacgatggc
gacgacgacaccggccgcgaacgcaaacgccgcaagaagcggcggcgggccgagcgcgaa
gaggaggcccagctggacgaggaggatctggacctcatcggcgagtcacgccccgactgg
gagcgccaggccgcggcgcagcccaagttcaagcggctcaagcgcggccaccgcgacgag
gacggcccgcgcagcgagcggcccgacctggccaagatcttttccgacgaagaggacgag
gatgacgacgacgccgccgccgccggccgctatgcgcgcccggcccaccgcggcgtcgat
gagatggacgacttcatcgaggaggacttccccgaggacgaggacgagcgcctgcggcgc
caggaggacctggaggtggcccggccgcgcgagcggttcattggcggcgtcatcgacacc
acgggcctcgacaaggacgccctcgacgacatggacaagatctttggcgacggcggcgac
tacgcgtgggtctttgagattgaggacgaggaggaggaccgcgacctcggcgagcagggc
atcgagctcaaggacgtcttcgagccgtcccagctgcaggagaagctcatgaccgacagc
gacaacgccatccgctacaccgacgagcccgagcgcttccagatcgaccgcaagcccttc
cgcaacctgcaaatcacccccgagcagttcaaggaggaggctcgctgggtcatcaacctc
atgtggcccaccaagctgctgccccagagcctgcacgagccctttagcaaggccgtcggc
aaagtcctcgagttcttcgtcgtggacgacgtcgaagtcccctacgtcttccagcaccgc
aaggactacctgatccacgccaagccgcgccgcagcggccgcgacggccgcgacgaccgc
gacgacggcggcgactacgacgtcagcgccgagaagctgctcaaccaggacgacctgtgg
cgcatcctcgagcttgacatccgcttccggtcgctcatcgagaagcgcaactcgctcgac
aagacctacgacagcctgcgcgcctcgtcccaccgcgtcgacgaccccgtcttcgaggcc
ctcgtcggccaggcctccaccatggaggagctgcaggagctgcaagactacctcaacttc
cagtacgccgcccagctgcgcgagctggcggccgagagcagcgcggccaacggcaaggcg
ggggacaaggaccacagcaacggcgccggcgccggcgccgccgtcgtcaccaagcggccc
ggcgccaagtccacgaccctctttgagcgcacccgcaaggccaaggcccacgccttcact
gccgcctacggcatctccgtcgaccgcctcgcccagaatgccctgcgcattagcaagaaa
acgtccgccgaggaccccgccaagctccccgtcgacctcgccgacagcctgaccgacgac
acctacgccaccgccgacgccgtcatccaggccgcccgcgcgctgtacgccgaggagctc
tacgtaagcccgcgcctgcgcaagcacttccgcgtcgcctactaccagaacggcctggtc
agctgccaccgcaccgacaagggcctgcgccgcatcgacgaggcccaccccttttacgag
atcaagtacctcatcaaccagaccctcgccgacatggcgcgccgcccggacgtgttcctg
aaaatgatgagggccgaggaggacgggctggtcgaggtccgcctggtcctgcagaacgag
cgcgagttccgccgccagctctacaccgagttcgcctcggacaacttcagcgagctcgcc
gacgcctggaacgacgagcgccaaaaggtgctcgacctggccttccccaagctcgacaag
atcatcgccaagggcgtcaaggactcgctgcgcaccgcttgccaagacgaggtcctcaag
tcctgccgcgacgagtactccaagcgcctcgaccaggcgcccttcaagcccaagggcctc
gtgctcggcacgccgccccgcgtcctgacgctgtccaacggcaggggcgacccgtcgcgc
gagcccgtgttttggacctgggttgaggaggacggtcgcgtgctcgagcacggccgcttc
ggcaacctggcccgcgacgaggcgcagcgggatgcctttgccgaggtcgtcaagcgccgg
cggcccgacgtcgtcggcgtcagcggcttctcggctgacacgcacaagctcctcaaagac
ctcgagagcctcatcagcgaaaagggcctcatgggccccgagtacgacgaccccgagacc
aacgactaccgcagcgatctgctcgaggtcgtcatcgtcaacgacgaggtcgcccgcctc
tacaaggacagcccgcgcgccgtcgccgagcacccgtccctcaactccatgctgcgctac
tgcgtcgccctcgcccgctacctgcagaaccccatgaaggagtacgccgccctcggcaag
gacgtgcagtcgctcgtcttccacccgtgccagcacctgctgcccgccgagcgcctggcc
aaggccctcgagtccgccatggtcgacatggtcaacctctgcggcgtcgacatcaacgag
gccgtcagcgacgcctacaccgccaacctgctgccgtacgtgtccggcctgggcccgcgc
aaggccacggccgtcatcaagggcatcaacgccaacggcggctcggtgacgtcgcgcgac
gagctggtcggcgacccggacagcggaaagctggccgtcgtgggcccgcgcgtctggaac
aactgcgccagcttcctgtacattgagtacgacagctccaacttgctgtccgacccgctc
gacaacacgcgcgtgcaccccgaagactacgagctgggccgcaagatggcggcggacgcg
ctcgagctcgacgaggaggacgtcaaggccgaggtcgacgacaacggccccggcgccatc
gtgcgcaagctcttcaaggaggaggagcaggaaaaggtcaacgagctgatcctcgaggaa
tacgccgagcagctggtgatgaagtacaaccagcgcaagcgcgcgacgcttgagacgatc
cgcgccgagctgcaggccccctatgaagagctgcggcacaagtttatgacgctgccgccg
gacgtcgtcttcaccatgttcacgggcgagaccaaggactcgctgtgcgagggcatgatc
gtccccgtctacgtgcgcgtggtcaaggacgactttgccattgtgaagctggactgcggc
atggagggccgcatcgaggcgcacgaggcgccgctgtcgtcgcgcggcggcggcagcggc
ctgcgtgacgccctgcgcgtcggccagacggcgcaggccaagctgctcgagctcaaccgc
aaggactttatcagcaagctgtcggtgcgcgaagacgcgctgaggcggcccttccgcaag
tttgtggaccacgagcgcggcacgtgggacttccgccaggaagaccaggaccgcgaggac
ctcaaggaaaaggacaagaccacgggccgcacgcagcgcgtcatcaagcacccgctgttc
cggcccttcaacgccacgcaggccgaggagtacctgggctcgcaggccgtcggcgacatg
gtcatccgcccgtcgtcgcgcggcaacgaccacctcgtcgtgacgtggaaggtcgccgac
ggcgtctacgagcacattgacgtgctggagctgcaaaaggacaacgagttctccgtcggc
cggctgctgcgcattggcggcaagtactcgtacacggacctcgacgagctgattgtcgag
cacgtcaaggccatggccaagaaggtcggcgagatgacgcgcaacgaaaagttccagccc
ggtacccgtgccgatacagaaaaatggcttaccacctacatggacgccaaccccaaccgg
tcgtcgtacgccttttgcaccgacaccaagcatcccggctacttcttcttgtgcttcaag
gtcaaccgcaacacgcgcgtcaacttctggccggtccgcgtcatccccaagggcttcgag
atgctcaaggtcgcctaccccgacatgcgcgccctcaccaacggcttcaagatgcgctac
caaaacgagattctcaagatgcagcaaaatggtggacggtga
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