Sporothrix schenckii: SPSK_04028
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Entry
SPSK_04028 CDS
T05555
Name
(RefSeq) transcription initiation factor TFIIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ssck
Sporothrix schenckii
Pathway
ssck03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPSK_04028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_04028
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
SPSK_04028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
27666118
NCBI-ProteinID:
XP_016586151
UniProt:
A0A0F2M3Y0
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MSSNPTGQPGPSGQPGQTNGASPKPPLKKIPPHLLRRKKADPLVARKKPVQRPPTAPGTS
ILSSANRAGITAFSLPPEARTLNTLTADEEAKKLAAFNAQRKANGGWTDPAPEGGYREFP
VVTTKRALRDGIRYHVMRFAKAGKGGDDNAEIDPTNQDDFTRPVSLHRRDPRQPAPGRAV
KEEATPAPESVATADDKEAEKAAQLKAEREAQRAIDMAQIAPVAAKESAPKKPVQQQKKE
KQFQLYFPKNTAEQKKETEIRYEEALPWHLEDADGKNVWVGTYVSALSEANVALVINGSS
FRMVPLEKFYRFTPKPPFKAYSIEQAEEIMGKKMTAGRWAMRDDEKRKARDELEETRKTI
GGRVRVKLESSTFRSAPRSEKVDHDDFDMEGDEFQDDDENVGLEPDNDEDSKDTRERLRR
NHLGANLFGDADEKEIDKEEEQDKAARKTGQLGKQLRKALAKREAHLEYLEYVDSDTNSE
KEDFLELSSEDEDEDDEKKKEEDEKAKAEGKDKDKPATATGTPKGSTTPQGKKSSDAAAI
GKKGKSLKRPGSPNLSESSGNESSRKKVKKHANGGSVRPSRSSTPLPGQPPRAKILKSGS
STGGGALSDGEATAGEMSDGAASGKRRIKIVGAGARSTPSGSRASSPNPTNAGALSPGSS
PGSPGRAGSPGSPTSRAGSPGAGGSGSMDAQEIIAALRKIPEGITVGGLLKQFGSRIGDG
PNQMKRKDWIKLVKENSVFGEDKLLRAKTPGSD
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaaccccaccggacagccgggtccgtcgggccaaccaggccagaccaacggc
gccagtcccaagccgcctctcaagaagatcccaccacacctcctccggcgcaagaaggcc
gacccccttgtggcccgcaagaagcctgtgcagcgtccgcccacagccccgggcaccagc
attctgtcgtcggccaaccgggccggcatcacagcgttcagtctgccgcccgaggcgcgg
acgctcaacacgctcactgcggacgaagaggccaagaagctggccgcgttcaatgcgcag
cgcaaggccaacggcggatggacagaccccgcgcccgagggcggctaccgcgagttcccg
gttgtgacgacgaagcgggcgctgcgcgacggcatccgctaccatgtgatgcgctttgcc
aaggcgggcaagggcggcgacgacaatgccgagattgacccgacgaaccaagacgacttc
acgcggccggtgtcgctgcaccgccgcgatccccggcagccggcgcccggccgggccgtc
aaggaagaggcgacaccggcacccgaatcggtggcgacggcggacgacaaggaggccgag
aaggccgcgcagctcaaggcggagcgcgaggcacagcgggcgattgacatggcccagatt
gcgccagtagcagccaaggagtcggcgcccaagaagccggtgcagcagcagaagaaggag
aagcagttccagctgtactttcccaagaacacggccgagcagaagaaggagacagagatt
cgctacgaggaggcgctgccatggcacctcgaagacgctgacggcaagaacgtgtgggtc
ggcacgtacgtgtcggcgctctcggaggccaacgtggcgctcgtgatcaacggctcgtcc
ttccggatggtgccgctcgagaagttctaccggttcacgccgaagccgcccttcaaggcg
tactcgattgagcaggccgaggaaattatgggcaagaaaatgacagcgggccggtgggcg
atgcgcgacgacgagaagcgcaaggcgcgggacgagctggaggagacgcgcaagacgatt
ggcggccgcgtacgcgtgaagctggaaagcagcacattccggtcggcaccgcggtccgaa
aaggtggaccacgacgactttgacatggagggcgacgagttccaggacgacgacgagaac
gtggggctggagccggacaacgacgaggactccaaggacacgcgcgagcggctgcggcgc
aaccacttgggcgccaacctgtttggcgatgccgacgagaaggagattgacaaggaggag
gaacaagacaaggcggcgcggaaaacgggccagctgggcaagcagctgcggaaggcgctg
gcgaagcgcgaggcgcatctcgagtacctcgagtatgtggactcggacaccaactcggag
aaggaggatttcttggagctctcgagcgaggacgaagacgaggacgacgagaagaagaag
gaggaggacgaaaaggccaaggcggagggtaaggacaaggacaagccggccacagcaaca
ggtacgcccaagggcagcaccacgccgcaaggcaagaagagctctgacgcggctgcgatt
ggcaagaagggcaagtccctcaagcggccgggctcgccgaatctctcggaatctagtggc
aacgagtcttcgcgcaagaaggtcaagaagcacgccaacggcggctccgtccggcccagt
cgctcctcgacgcccctgcccggccagccgccgcgggcgaagatcctcaagagcggctcc
tccaccggtggcggcgccctgagcgacggcgaggcgaccgccggcgagatgtccgacggt
gccgccagtggcaagcggcggatcaagattgtcggtgccggcgcccgcagcacgccctcg
ggatcccgcgcctcgagcccgaaccccacaaatgccggtgcgctgtcacctggttccagc
cccggatcgccgggccgtgctggttcgcccggctcgccaacgtcccgcgccgggtcgccg
ggcgccggcggctctggctcgatggacgcacaggaaattattgctgcgctgcgcaagatt
cccgagggcatcaccgtgggcggtctgctgaagcagtttggcagccgcattggcgacggt
ccgaaccagatgaagcgcaaggattggatcaagctggtcaaggagaactcggtctttggc
gaggacaagcttctgagagcaaagacgccgggttctgactag
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