Sporothrix schenckii: SPSK_04286
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Entry
SPSK_04286 CDS
T05555
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
ssck
Sporothrix schenckii
Pathway
ssck03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPSK_04286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssck03009
]
SPSK_04286
Ribosome biogenesis [BR:
ssck03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPSK_04286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_N
HAT_PRP39_C
NRDE-2
DUF1829
Motif
Other DBs
NCBI-GeneID:
27666374
NCBI-ProteinID:
XP_016586260
UniProt:
A0A0F2M3A1
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MAHVDDKARYYLERAVPQLREFEAKEIFSKDEIRTLVQKRTEYERLILSPGSSPADVLAY
IAWDQSLDDLRAKRCRRLKIKQSTSFTSQGRIFQTFERGVTKHPGSLLLWRKYLEYAAAA
KATKRWRRIMTRALRMLPSEGGLWVVAGRKAWQDGDMEGARGLFMRGCRFCTTEPLVWLE
YARLEMEWLAKLEKKRGTPLYNASVAAIAADAAAGSATSKPRNVYEEGEGMALHEGDTDD
ESDDDEGDFSNNAILPKSMIDDPLAKNKKAAVFSDETVEKLQATPALEGAIPRAIFDEAA
KQAFFSADAAESFFDLFALFAASVPTAQPMLVAHVLSTLDAKYKQDAATWNCRVKNCVLG
LNPDAPAFPRALRTALTTLREGLDKATNKAKFAAKSAAWIDVLLVRKEDELDPSLRAILE
DTRRKVERAGEAAAEAKKLL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgtcgacgacaaggcccggtactacctggagcgggcggtgccccagctccgc
gagtttgaagccaaggagattttctcaaaggacgaaatccggacactggtccagaaacgc
acggaatacgaacgcctcatcctgtctcccgggtccagccccgccgacgtcctcgcctac
attgcctgggaccagtccctcgacgatttgcgagccaagcgctgccgccgcctcaagatc
aagcagtcgaccagctttaccagccagggccgcatcttccagacgtttgagcgcggcgtg
accaaacacccaggcagtttgctgctgtggcgcaagtacctcgagtatgcggcagccgcc
aaggccaccaagcgctggcggcgcatcatgacgcgggcgctgcgcatgctgccgagcgag
ggcgggctgtgggtggtggccggccgcaaggcgtggcaggacggcgacatggagggcgcg
cggggcctgtttatgcgcgggtgccggttctgcacgaccgagccgctggtgtggctcgaa
tacgcacggctggagatggagtggctggcgaagctcgagaagaagcgggggacgccgctg
tacaacgcgagcgtggcggccattgcggccgacgccgccgcgggctcggcaacgagcaaa
ccgcggaatgtctacgaagaaggcgagggcatggccctgcacgaaggcgacaccgacgac
gagtctgacgacgacgagggcgatttcagcaacaacgccatcctaccaaagtcgatgatc
gacgacccgctggccaagaacaagaaggccgccgtgttcagcgacgagaccgtcgagaag
ctgcaggccacgccggcgcttgaaggcgccatcccgcgggccattttcgacgaggctgcc
aagcaggcctttttcagcgcggacgctgccgagtcctttttcgacctgtttgcccttttt
gccgcgtccgtgcccaccgcgcagccgatgctcgtggcgcacgttctgtcgacgctcgac
gcaaagtacaaacaagacgccgccacgtggaactgccgcgtcaagaactgcgtgctgggc
ctcaaccccgacgcgccagcgttcccgcgggcgctgcggaccgcgttaacaacgctgcgc
gagggcctggacaaggccaccaacaaggccaagtttgcagccaagagcgcggcgtggatc
gatgtgctgctggtgcgcaaggaggacgagctggaccccagtctgcgggcgattctggaa
gacacgcggcgcaaagtcgagcgggcaggcgaggcggctgccgaagccaagaagctgtta
tga
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