Sporothrix schenckii: SPSK_04815 Help Entry SPSK_04815        CDS       T05555                                  Name (RefSeq) 5'-3' exoribonuclease 1   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism ssck  Sporothrix schenckii Pathway ssck03008   Ribosome biogenesis in eukaryotes ssck03018   RNA degradation Brite KEGG Orthology (KO) [BR:ssck00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     SPSK_04815   09123 Folding, sorting and degradation    03018 RNA degradation     SPSK_04815  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ssck03019]     SPSK_04815    03009 Ribosome biogenesis [BR:ssck03009]     SPSK_04815    03016 Transfer RNA biogenesis [BR:ssck03016]     SPSK_04815    03036 Chromosome and associated proteins [BR:ssck03036]     SPSK_04815 Messenger RNA biogenesis [BR:ssck03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      SPSK_04815   mRNA degradation factors    5'-3' decay     5' exonucleases      SPSK_04815 Ribosome biogenesis [BR:ssck03009]  Eukaryotic type   Pre-60S particles    RNases     SPSK_04815 Transfer RNA biogenesis [BR:ssck03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     SPSK_04815 Chromosome and associated proteins [BR:ssck03036]  Eukaryotic type   Gene silencing    piRNA pathway     SPSK_04815 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 Motif Other DBs NCBI-GeneID:  27666855 NCBI-ProteinID:  XP_016583801 UniProt:  A0A0F2LX99 LinkDB All DBs Position Unknown AA seq 1492 aa AA seqDB search MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHSDSDDAMTRLSEEEM FIRIFNYIEHLFGKIKPKQMFFMAIDGVAPRAKMNQQRSRRFRTALDAENMRKKAIAEGQ QMPTEDPFDSNCITPGTAFMAKLSTQLKYFVNKKVSEDKEWQQCKVVLSGHDVPGEGEHK IMEYIRNAKAQKDYNHNMRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQNKTKSKE LEHQNFYLMHLCIVREYLELEFQELKTEGLMKFPFNLERIIDDFILMAFFVGNDFLPNLP RLHINEGALATMFTLYKRVLPQCEGYINEGGSVNVERLGKLLAELSKEEFRFFEHEIEGE KWYQAKLMSHAPAGEGLTIAVDKKKRGGRNHGSSTNGTPNSSNTNSFAPTPTPQSAAAAA AAANKGKIQLSNFQKELWKSKIRKFVSKPTATPLDLGADLKADDRKFVQDLADSLRIDWR TDEDGEGNRRLVLSFPADRVSNKNGQNEDDEEEEEAQLALFRVMKKYDTADVVDVFAGES QEALDKLYMLKFQQWKDAYYKDKFHWSDAELSSEVRKICENYVQGLQWVLFYYYRGIASW PWFYQYHYSPLISDVIKGLGADLNFKLGQPFRPFEQLMGVLPDRSKSIVPTVYWGLMTDE NSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDERRLLDAMAPKNDLLSEEEKARNEFGV PIEFAFQPDTDFVYLSPLTGIFPDVTHCRCVMNIFDLPPTEGLEYLHDLTDGALLNASAL AGFPSLHTLPYHASLGFHAVNVFQQDSRNASMVVTLSDSEARTNIEAAKRKLGQRCHVGY PFLQEAKVVRVSDELFSYTLDDKGAVVQTPHGGRELDRWSSKARSIEEFYSKRLAILTGT VESLVHVHMLKGLIKTDDGATIKEYGEVLSMETDFATQVIVDAVVNEDERFIERAAVPIS EEFPVGSHAFYLGDYAYGRPLGVVGHKGNRMDVMVSVLKDKENDFAHGIVAHADRTHRYT PSYAVAKSLDLHPLSLSKITSSFFVFSVGNLKVNLGLNLKFEAKKQKVLGFSRKSGTGWE FSTPAIQLIANYMVAFPDFFAGLKHLPQNRDIKDTDIWPDQALASKRVKEIGAWLKTQET SKLERVPLDAEQLDSDIVGQIAAAADNSSAATAPTETKPIKNVPRNAVLKPADAEQRLGN QNFALGDRVVYVQDSGKVPIALRGTVVGISRTPTTKLLDVVFDTTFMSGTTLGERCPPFR GQMVTASSVLNLSNRQVVAGSRAAIERKPNASLTTLTTPTTGSGGSGGQQNGPNGQGFRQ YRDAAPPAPLRGSFRGALNGSNNGRGRGNGGQQQQSRPGPRPGTALEHSSLVYRPGGQGQ GQAQQPQQQQANGRGGRGGRGGRGGRGGTSHGNGDGQQQGAAAVAAAQSFNAVPPPANLE AHRGGRGRGRGRGRGGRGNAAGGRGGNNAGQQPTKNGGGNSSNAAAPAPSAA NT seq 4479 nt NT seq  +upstreamnt  +downstreamnt atgggtgtccccaagttcttccgatggctctcggagcggtatccggccatctcacagctg attgccgagaaccgcatccccgagttcgactgcctctacctcgacatgaacggcatcatc cacaactgcacccacagcgactcggacgacgcgatgacccgcttgagcgaagaagaaatg tttatacgcatcttcaattacatagagcacctgtttggcaaaatcaagcccaagcagatg ttcttcatggccatcgacggcgtggcaccccgcgccaagatgaaccagcagcgctcgcgt cgtttccgcacggccctcgacgccgagaacatgcgcaaaaaggccattgccgagggccag cagatgcctaccgaagacccctttgacagcaactgcatcaccccgggcactgcctttatg gccaagctgtccacccagctcaagtactttgtcaacaagaaagtcagcgaggacaaggag tggcagcagtgcaaggtcgtgctgtcgggccacgacgtccctggcgagggcgagcacaag attatggagtacatccggaacgccaaggcgcaaaaggactacaaccacaacatgcggcac tgtctgtacggcctcgacgctgatctgatcatgctgggtctgctgagccacgacccgcac ttctgcctcctgcgcgaggaggtcacctttggtcgccagaacaagaccaagtccaaggag ctggagcaccagaacttttacctgatgcatctctgcattgtacgcgaatacctcgagctc gaattccaggagctcaagactgaggggctcatgaagttccccttcaacttggagcgcatc attgacgacttcattctcatggcattttttgtcggaaacgactttttgcccaatctgccg cgtcttcacatcaacgagggcgctctggcaaccatgttcacattatataagcgcgtgctg ccccagtgcgagggctacatcaacgagggcggcagcgtcaacgtggagcgcctcggcaag ctgctcgcagagctctccaaggaggagttccgctttttcgagcacgagatcgagggcgag aagtggtaccaggcgaagctgatgagtcacgcgccggcgggcgagggactcaccatcgcc gtcgacaagaagaagcgcggcggccgcaaccacggcagcagcaccaacgggacgccgaac agcagcaacaccaacagctttgcccccacgcccaccccgcagtcagccgccgccgccgcc gctgccgccaacaagggcaagatccagctgtccaacttccagaaggagctctggaagtcc aagatccgtaagtttgtcagcaagccgacagcaacgccactggatctaggcgccgatctc aaggcggacgaccgcaagttcgtccaggacctggccgacagtctgagaattgactggcgg accgacgaggatggcgagggcaaccgccgcttggtcctctctttccccgccgaccgtgtg tccaataaaaatggacagaacgaggacgatgaggaagaggaagaggcgcagctggccctc ttccgtgtcatgaagaaatacgacacggctgacgtcgtcgacgtctttgccggcgagagc caggaggctctcgacaagctgtacatgctcaaattccagcagtggaaagacgcctactac aaggacaagtttcactggtccgacgccgagctgagcagcgaggttcgcaagatctgcgaa aactacgtccaaggcctgcaatgggtcctgttctactactaccgaggcattgcctcgtgg ccgtggttctaccaataccactactcgcccctgatttccgacgttatcaagggcctgggc gccgacctcaacttcaagctcggccagcccttccgcccctttgagcagctcatgggcgtg ctgccggaccgcagcaagagcattgtgcccacagtctactggggcctgatgacagacgag aactcgcccatcatcgatttctacccgcgcgactttgagctcgacatgaacggcaagaag atggagtgggaggccgtcgtcaagattccctttatcgacgagcgccgattgctggacgcc atggcgcccaagaacgaccttctctcggaagaagaaaaggcccgcaacgagtttggcgtg cccattgagtttgccttccagccggacaccgactttgtctacctgtcgccgctgacgggc atatttccggacgtcacgcactgccgctgcgtcatgaacatctttgacctgccgcccacg gagggtctcgagtacctgcacgatctgacagacggcgcactgctcaatgcgtcggccctc gcaggcttccccagtctgcacacgctgccctaccacgcgtccctcggcttccacgccgtc aacgtgttccagcaggacagccgcaacgccagcatggtcgtcaccctgtccgactcggag gcgcgcaccaacattgaggcggccaagcgtaaactcggccagcgttgccacgttggctac ccgttcttgcaggaggccaaggttgtgcgcgtgtcggacgagctcttcagctacacgctc gacgacaagggtgccgtggtgcagacaccgcacggcggccgtgagctcgaccgctggtcg tccaaggcacgcagcatcgaggaattttacagcaagcgcctggccattctgacgggcacc gtcgagtcgctcgtgcacgtgcacatgctcaagggcctgatcaagaccgacgacggtgcc acgatcaaggagtacggcgaggtgctctccatggagaccgactttgccacacaggtgatt gtcgatgccgtcgtcaatgaggacgagcgcttcattgagcgcgccgccgtgcccatctcc gaggagttccctgtcggatcgcacgctttctacctgggcgactacgcctacggccgtcct cttggcgtggtcggccacaagggcaaccgcatggacgtcatggtgtctgtcctcaaagac aaggagaacgactttgcgcacggcattgttgcgcacgccgatcgcactcaccgctacacg ccgtcgtacgcggtggccaagtccctggacctgcacccgctatcgctgagtaagatcacg tcgtccttcttcgtgttttctgtcggaaacctcaaggtcaacctgggcctgaacctcaag tttgaggccaagaagcaaaaggtgctgggcttctcgcgcaagtcgggcactggctgggag tttagtaccccggccatccagctcattgccaactacatggtggcgttccccgacttcttc gccggcctcaagcacctgccgcagaaccgcgacattaaggacacggacatctggccggac caggcgctagcatcaaagcgcgtcaaggagattggcgcgtggctcaagacgcaggagacg agcaagctcgagcgcgtcccgctggatgccgagcagctcgactcggacattgtgggccag atcgccgcggctgccgacaactcatctgccgctacagcccccaccgagacgaagcctatc aagaacgtgcctcgcaacgcggtgctgaagcccgccgacgccgagcagcggctgggcaac cagaactttgcgctcggcgaccgcgtcgtctacgtgcaggactcgggcaaggtgcccatt gccctgcgcggtaccgtagtgggcatcagccgcacgcccaccacaaaactgctggacgtt gtgtttgatacaacgtttatgagcggcaccacgctcggcgagcgttgcccgccgttccgt ggccagatggtgacggcatcgtcggttctcaacctgtctaaccgccaggtcgtcgccggc tcgcgcgcggccattgagcgcaagccgaatgcctcgctgacgacgctgacgacaccgacg accggctcgggtggcagtggtggtcagcagaatggcccgaacggccagggtttccggcag taccgtgatgcagcaccgcctgcccctctgcgcgggtcgtttcgcggcgctctgaacggc agtaacaatggccgtgggcgcggcaatggcggccaacagcagcagtcgcgcccgggaccg cgccccggcacggccctcgaacatagcagccttgtgtaccggccgggtggacagggacaa ggacaggcacagcagccacaacagcagcaggccaacggccgcggtggccgcggcggtcgg ggcggccgtggtggccgtggtggcactagccacggcaacggcgacggccagcagcaaggc gcggctgcggtggctgcagcgcagtcgttcaacgccgtgccgccgccggccaacctcgag gcccatcgtggaggccggggtcgtggccgtggtcgtggtcgtggtggccgcggcaatgcc gccggcggccgtggcggcaacaacgcgggccagcagccaaccaagaacggcggcggcaac agttccaatgccgctgctcctgctccgtcagcggcgtaa

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