Sporothrix schenckii: SPSK_04902
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Entry
SPSK_04902 CDS
T05555
Name
(RefSeq) xeroderma pigmentosum group C-complementing protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ssck
Sporothrix schenckii
Pathway
ssck03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPSK_04902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssck03400
]
SPSK_04902
DNA repair and recombination proteins [BR:
ssck03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
SPSK_04902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-GeneID:
27666939
NCBI-ProteinID:
XP_016582875
UniProt:
A0A0F2LTL7
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MSSSRAPRKRPGGGDHPSPVPPKKTKAAVVKKEKPEEDSLALKANRSTRRKTATPTAAAK
RPSPSPSASKAVPRKATLFDDLDGVGSSPASANGVSDLQYLKSLENDGEASEDSDSSSEL
SAMSDADFEDVPLAPEESKKEDVKSDDDDDNDDEDEDMEFEDVTAPEPAPFSFLSMAVDH
DETGNDGGAASGDLELTLIEDTRVSVTGLGDAKKGPTKIERLVRSATHCVHVQSLLWHNA
KRNAWLCDPEVQGLLLSHIPPRLWDEVDRWRLKSGLVVPDSDSKTKGKGNTVGKGKGNSG
KGARAASREWSGAAARLEPGAVDMSHGDPLFRLLRALSYWWRQKFRITAPGLRKKGYLTL
ERLDDFLKAAKDTAGNNSLRFGERIRNRAAFRNHAASLEGSRDVGAQLFTALLRALGLEA
RLVANLQPLGFGWTKLEEADADEEGDKVDGNSEAPVATTSSASTPATPTPKKPRPKALPR
RPKTKVNPKEDGPIVIDDDSDLEMAEVNSDNESVVFVPDAKTTPTKPAAPKPAFDKDLHF
PIYWTEVLSPVTQKYIPVDALVKHIVATSRELIESLEPRGGKADKARQVMGYVVGYSADG
TAKDVTVRYLRRQMLPGRTRGVRFPVEKIPVYNKHGKIRRYDMLDWFRQSVMRGYVRGQS
AKYPLTEVDDAEDSTDLRPAAAEKKEVKEGEETLQYYKQSKTFVLERHLKREEALVADAV
PVKVFRNGKKGKGAAKKKKSKNDDADLDGDDDDDDDTADAGGAENVYLRKDVVQVKSAET
WHKQGRAPVDGQRPLKRVPYRAATINRRREIAEAEAASGEKVLQGLYSYEQTDWIIPPPI
QNGVIPKNAYGNIDLFAEHMLPKGAVHVPFRGAMRVCKKLQIDFAEAVIDFEFGHRMAVP
VIQGVVIAEEHHDRVMEELVKDEAERTRKADEKKRAVALSLWRKLLMGLRIVERIRKDYG
EVREDDRVFGHRDDRGVVDLDSVAAPHDDVETAGGFLPEGYEYEDEPATRPATTSSFFPV
HDEGNEDEGDFDGGGFVLE
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcgcgcgctcctcgaaagcggccgggcggcggtgatcacccgtcacctgtg
ccgccgaagaagacgaaagcagcggtagtgaaaaaagaaaagccagaggaggatagcttg
gcattgaaagccaaccgaagtaccaggaggaagacagcgactcctactgccgccgcgaag
cgaccgagtccatcgccgtctgcttcaaaagcagtccctcgaaaagcgaccctctttgac
gacctcgatggtgttggatcgtcccctgcctcggccaatggcgtctcggatctgcagtac
ctgaagagccttgagaacgatggcgaagcaagcgaagacagcgacagcagctctgagctg
tccgctatgtctgatgccgattttgaagatgtgccgttggcgcctgaggagagcaagaag
gaggacgtcaagtcagatgacgacgacgacaatgatgacgaggatgaggacatggagttt
gaagacgtcactgcgcccgagccagcacccttctcgttcctatctatggccgtcgaccac
gatgagactggtaacgacggcggcgcagcctcgggcgacctcgagctgaccctcatcgaa
gacacccgtgtctcggtaaccggcctgggcgacgccaaaaagggcccgacaaagatcgag
cgcctcgtgcgcagcgccacccactgtgttcatgtccagtcgttgctctggcacaacgct
aaacgcaacgcctggctgtgcgaccccgaggtgcaggggctgctgttgtcccatatcccg
ccgcgtctgtgggacgaggtcgatcgatggcggctcaagtcggggctggtcgtgccggac
agtgacagcaagaccaagggcaagggcaatacggtcggcaaaggcaaagggaacagcgga
aagggcgcacgcgcggcttctcgagagtggagcggcgcagcggcgcggctggaacccggc
gcggttgatatgagccatggtgatccgctcttccgcctgctccgtgccctatcatactgg
tggcgccagaagttccgcatcactgcacctggcctgcgcaaaaaaggctacttgactctg
gaacgtctcgatgacttcctcaaagctgccaaagacactgcgggcaacaattctctccga
ttcggtgagcgaatacgaaatcgtgccgcctttcgaaaccatgctgccagtctagaggga
agtcgtgatgttggcgcacaactcttcacagcgctactgcgggcgctgggactggaagcg
cggctggtggccaacctgcagcctcttgggtttggctggaccaagctcgaagaagctgat
gcggatgaagaaggagacaaggtcgatgggaactcggaggcgccagtagccacgacgtca
tcagcatcaacaccggctacgccgacaccaaagaagccgagaccgaaagctctgccgaga
cggccaaaaacaaaagtaaaccccaaagaggatggtcccatcgtgattgacgacgactct
gatctcgagatggccgaggtgaacagcgacaacgagtcagtcgtgtttgttcccgacgcg
aagacgacgcctaccaagcccgctgctcctaagcctgcatttgacaaggacctgcatttt
cccatctactggacggaggtgctgagccccgtgacgcagaaatacatacctgttgacgct
ctcgtcaagcatattgtcgccacaagccgtgagctgattgaatccctcgaaccccgcggt
ggcaaggccgacaaggcgcggcaggtcatgggctacgtcgtcggctactcggcggacggc
accgccaaagacgtcactgtccgctacctacggcggcagatgctgccaggccgcacccgc
ggcgtgcgcttccccgtggagaagatacctgtctacaacaagcacggcaagatccggcgc
tacgacatgctggactggttccggcagtcggtgatgcgtggttatgtgcgaggccagagt
gcaaagtatcctcttaccgaggtggacgacgccgaggatagcacggacctgcggcccgca
gcggcggagaagaaagaggtcaaggaaggcgaagagacgctacagtactacaagcagtct
aaaacgtttgttctagagcggcacctcaaacgcgaagaagcgctggtggcggacgctgtg
ccagtcaaggtgtttcgcaatggcaagaaaggcaaaggcgctgcaaagaaaaagaagagc
aaaaacgacgacgcagacctcgatggtgatgacgacgacgacgacgatactgccgacgcc
ggtggtgctgaaaacgtgtacctgcgcaaggatgtcgtgcaagtcaagagcgccgaaaca
tggcacaaacaagggcgtgcgcccgttgacggccagaggccgctgaaacgcgtaccctac
cgcgccgccaccatcaaccgccgccgcgagattgccgaggccgaggctgcgtcgggcgag
aaagtcctgcagggtctgtacagctacgagcagaccgactggattattccgccgccgatc
caaaacggtgtcatccccaagaatgcctacggcaacattgacctgtttgccgagcacatg
ttgcccaagggtgccgtgcacgtgcccttccgcggcgccatgcgcgtgtgcaagaagctg
cagatcgactttgcggaggccgtcatcgactttgagtttggccaccggatggctgtgcct
gtcatccagggtgtcgtgattgccgaggagcaccacgaccgtgtgatggaggagctggtc
aaggacgaggccgagcgaacacgcaaggccgacgagaagaagcgtgccgtggccctgagt
ctgtggcgcaagctgctgatgggcctgcgtatcgtggagcggatccggaaagactatggc
gaagtgcgggaggacgaccgggtgtttggccaccgcgacgaccggggcgtggtggaccta
gatagcgtggcggcgccccatgacgatgtcgagactgccggtgggttcttgcccgagggt
tacgagtacgaagatgagccagccacacggccagcaacgacgtccagcttcttccctgta
cacgacgaaggcaacgaagacgaaggtgacttcgacggaggtggttttgttctagagtaa
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integrated database retrieval system
