Sporothrix schenckii: SPSK_05056
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Entry
SPSK_05056 CDS
T05555
Name
(RefSeq) transcription initiation factor TFIIE subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ssck
Sporothrix schenckii
Pathway
ssck03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPSK_05056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_05056
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
SPSK_05056
Prokaryotic type
Archaeal type
TFE
SPSK_05056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_6
NMU
Motif
Other DBs
NCBI-GeneID:
27667086
NCBI-ProteinID:
XP_016583039
UniProt:
A0A0F2LS71
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MRQLRTLILLLPFCHPLHDDHATPSTQATPAITTSRASLTRDCVSVAHPPRPPLPALLSS
PRDLHLTSDLFKLPPSSPSSIHPNVLTSIAFTMDLAKTLVRSVVRAFYETKHILIIDALV
IHSALRDDDLAYLISMNIKDLHKMCQKLKEDRLLASYGPHHLLGFRLALHSRSELREGQQ
RPNNRTYYYIDYRQTIDAIKWRVYKIDKDLQGPVVPPSEKKEYFCDHCKAEWTQMEVLDS
VGPAGFLCHRCGTVLRHGDGGKSGGHERSTRMNNQFKFITDLLPKIDSVVIPDNDFEAAF
NSRRAVMRDAMHQTHTSIGVDAMNRPTAVKGMANTGPSTLSVSIQAGNGPTEEEKAEERA
QRERVAQQNALPSWMSNSTITGEAFKTDQVAGVQALDDDVKHPTAKAKTDATAEADIDDY
FSRLKRQAAEEAQKNQNGNNDDGEDGEDDDDEDGEDDDEEDDEAMFEDVVQTGNNSGAAT
PASPGGGLAPPPPRNAASPPRSTPFGVGNGTSTLPKAPSPLRQAHSQSSLKREAMSDPPS
PTSSPKKMKLEDGATEPAAEPAKVVVKAEAEDNDEDEEGFEFEDV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagacagcttcggacattaattttgcttcttcccttttgccatcctctccacgacgac
cacgcgacaccatcgacgcaggccacgcccgccatcacaacgtcccgcgcgtcgcttact
cgagactgtgtctcggtagcgcatccgccgcgtcctcctctccccgccctcctctcttcg
cctcgtgaccttcatctcacatccgacctgttcaaacttcctccttcgtccccttcgtcc
atccacccgaacgtcctcacgtccatcgccttcaccatggatctcgcaaagactctggtg
cgctccgtcgtgcgggcgttctacgagaccaagcacattctcattatcgatgcgcttgta
attcactcggcactacgcgacgatgacttggcctatctcatcagcatgaacattaaagat
ctccacaagatgtgccagaagctcaaggaagatcgtctgctcgcatcgtacggaccgcac
cacctgcttggtttccgtttagccttacactctcgatccgagcttcgcgaagggcagcag
cggcccaacaaccgtacctactactacatcgactaccggcagacgattgacgccatcaaa
tggcgcgtctacaagatcgacaaggacctccagggccccgtcgtgccccccagcgagaaa
aaggagtacttttgcgaccactgcaaggccgagtggacccagatggaggtgctcgacagc
gtcggcccggccggcttcctgtgccaccgctgcggcaccgtcctgcgccacggcgacggc
ggaaagtcgggcggccacgagcggagcacgcgcatgaacaaccagttcaagtttatcacg
gacctgctgcccaagattgacagcgtcgtcatccccgacaacgatttcgaggcggccttc
aacagccggcgggccgtgatgcgcgacgccatgcaccagacacacacgagcattggcgtg
gacgccatgaaccggccgacagccgtcaagggcatggccaatacgggcccgagcacgctg
tccgtgtcgatccaggccggcaatgggccgaccgaggaagaaaaggccgaggaacgcgcg
cagcgcgagcgcgtggcccagcagaacgcgctgccgagctggatgtccaacagcacaatc
acgggcgaggcgttcaagacggaccaggtggcgggcgtccaggcgctggacgacgacgtc
aagcacccgacagccaaggccaagacggacgccacggccgaggccgacattgacgactac
ttttcgcggctcaagcggcaggcggccgaggaggcgcaaaagaaccaaaacggcaacaac
gacgacggggaggacggcgaagacgatgacgacgaggacggcgaggacgacgacgaggaa
gacgacgaggccatgttcgaggacgtggtgcagacgggcaacaactcgggcgcggccacc
cccgccagcccgggcggagggctggcgccgccgcccccacgaaacgcggcgtcgccaccc
cggtcaacgccgtttggtgtgggcaacggcaccagcacactgcccaaggcgccatcgcct
ctgcgccaagcacactcgcagagcagcctgaagcgagaggccatgtccgacccgccaagc
ccaacaagctcgcctaagaagatgaagttggaggacggggcgacagaacccgctgcagaa
ccggccaaggtggtggtcaaagcggaggccgaagataacgacgaggatgaggaaggcttt
gaatttgaggatgtgtaa
DBGET
integrated database retrieval system
