Sporothrix schenckii: SPSK_05087
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Entry
SPSK_05087 CDS
T05555
Name
(RefSeq) RNA-binding protein Musashi
KO
K14411
RNA-binding protein Musashi
Organism
ssck
Sporothrix schenckii
Pathway
ssck03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPSK_05087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_05087
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SPSK_05087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
27667116
NCBI-ProteinID:
XP_016583142
UniProt:
A0A0F2LX51
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MASDPVLLRSDRFEFCEVDDLLHVFTAQTAHLPPSPGYANWTASALPWTPEDDSTAVRRR
LAKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDGLSGRSRGFGFLTFKDPKTVNIVM
VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMD
KDTGRPRGFGFVTFESDAGVEACLSTNLEIHGKPIEVKKAQPRGNIREDDDSRRGGPGGN
KFRKGPMGGYDDQGGNNQMGGGGGMAGGMTPQVMAQYWQRMQQYFAVMQQQMAMNRGMGG
GNGMPNMQNMPNMGNMGSMGNMGNMGNMGNMGGMGGMGGMNPGMNPGMNPQMMQMMQMQQ
MQQMMNRNGGGPGGPGGPGNTGMMPQMMGQQPFQGGPGGGPGGPNGPNSGRGNFNAMDQQ
MFEQNKYEQGQRGGSVGPGGGGPGSATGGGGGSNGGQSPWGAGNGAGGDGSFDDGSNGGG
NNGGNGNMNQHQGGRGGFLRGNNNDINRNGPMDPNNAPPANAPTGPKNAGRPGANYRGGG
RGGGGGNRGYHPYSR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgaccctgtgcttttgcggagcgacaggtttgaattctgtgaggtagatgat
ttgcttcacgtcttcaccgcacaaaccgcccatttaccaccgtcccccggctacgccaac
tggaccgcaagtgccctgccgtggacgccagaggatgactcgacggcagtccgtcggcgg
ctcgcaaagatgtttatcggcggcctgaactgggagacaacggaccagtcactccgcgat
tacttctctcaattcggcgaggtactcgaatgcactgttatgcgcgatggtctttctggt
cgctcgcgcggcttcggcttcctgacgttcaaggaccccaagacggtcaacattgtcatg
gtcaaggagcactacctcgacgggaaaattatcgatcccaagcgcgccattccccgtgac
gaacaggaaaagacgtcgaaaatatttgtcggtggcgtctcgcaggagacaacggaccaa
gagtttaaggagtactttgctcagtttggccgcgtcgtcgatgccacgcttatgatggac
aaggacactggccggccgcgtgggtttggcttcgtgaccttcgaatccgacgcgggcgtg
gaggcgtgcctctctacgaacctcgagatccacgggaagcccattgaggtcaagaaggcg
cagccccgcggcaacattcgcgaagacgacgacagccgccgtggtggccccggcggcaac
aagttccgcaagggtccgatgggcggctacgacgaccaaggcggcaacaaccaaatgggc
ggcggcggcggcatggccggcggcatgacgccccaggtcatggcccagtactggcaacgc
atgcagcagtatttcgccgtcatgcagcagcagatggccatgaaccgcggcatgggtggc
ggcaacgggatgcccaacatgcagaatatgcccaacatgggcaacatgggcagcatggga
aacatgggcaatatgggtaatatgggcaacatgggcggcatgggcggtatgggtggcatg
aaccctggtatgaatcctggtatgaaccctcagatgatgcagatgatgcagatgcagcag
atgcaacagatgatgaatcgcaacggcggcggccctgggggtcccggcggccctggcaac
actggcatgatgccccagatgatgggccaacagcccttccagggtggccctggtggcggg
cccggaggacccaacgggccgaacagtggacgcggcaatttcaacgccatggaccagcag
atgtttgaacagaacaaatacgaacaaggccagcgtggtggcagcgttggtccgggtggc
ggcggtcctggtagtgccacgggcggcggcggcggcagcaacggcggccagtcgccgtgg
ggagcgggcaacggcgccggcggtgatggctcttttgacgacgggagcaatggtggcggc
aacaacggcggcaacggcaacatgaaccagcatcaaggcggccgcggcggcttcctccgc
ggtaacaacaacgacatcaaccgcaacgggccaatggatcccaataatgccccgcctgct
aacgcgccgaccgggccgaagaacgccggacggcctggtgcgaactatcggggcggcggc
cgaggcggcggcggtggcaaccgcggttatcacccctactcgcggtag
DBGET
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