Sporothrix schenckii: SPSK_05164
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Entry
SPSK_05164 CDS
T05555
Name
(RefSeq) poly(A)-specific ribonuclease
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ssck
Sporothrix schenckii
Pathway
ssck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPSK_05164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_05164
Enzymes [BR:
ssck01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
SPSK_05164
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
SPSK_05164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
27667191
NCBI-ProteinID:
XP_016583482
UniProt:
A0A0F2LY33
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MGCKTVPLARFWRELVTILPEIAKSEYVAIDFEMTGIEPRRASKLHKPTKDEIYQRAKQA
TETFNVVQFGITCIVFDDEEKDTVHLKSYNFNVSPMFDTAFSGVDTIARTLDRTLTLSYK
TLMFLRRSRIRIEDAYDGGIYYLSRAEEAELLPELFATSTHGRSDDILLDEQKPETMQFY
HDTVDQIRSWAEKEEEPDRLSYLNIVNPHQGPLTRFQRRLVYQMLDTEFGGRYRATVNGN
FFMQITEKDTENETKEQLEKTSNLKRAVAFQRGLRYIAEALVGGDFANDVWSMYKQDSAM
VEPGCEARLRESETKLKEKRPVLVGHNMFHDLCFLHATFFSPLPDTLDEFDRIVHELFPR
IIDTKHILKRDDNEMMPSKSLEEAFVDIEGVSSPFKIAGERAGHTDRLHHVNEHQAGHDS
YKTSMVFLKEMWRRVDSTKKGTYAHKLLLWENSLVKGFANKVRLGNAGLWPVGQMGECDT
MAK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaagaccgtgcctctagcccggttctggagagaactggtcacaatcctgccg
gagattgcaaagtctgagtatgtggccatcgactttgaaatgaccggcatcgaacctcgt
cgcgcgtcaaagcttcacaagccgacaaaggacgagatctaccagcgggccaagcaggca
accgagacgttcaacgtggtgcagtttggcatcacctgcattgtttttgacgacgaagag
aaagacacagttcatctcaagtcgtacaacttcaacgtgtcgcccatgtttgacaccgcc
ttcagtggtgtggacaccatcgcacgcacgctggaccgcacactgacgctctcgtacaag
acgctgatgtttctgaggcgcagccgcatccgcatcgaagatgcctatgacggtggaatc
tattacctcagtcgggcggaggaggcggagctgctgcccgagctgtttgccacgtcaacg
catggtcggagcgacgacattctgctggatgaacagaagccggagacaatgcaattctac
cacgatacggtggaccaaattcggagctgggcggaaaaggaggaagaaccggatcgactg
tcctacctcaacatagtcaacccgcaccaaggcccgttgacgcgtttccagcgtcgtctg
gtctaccagatgctcgataccgagtttggtggcaggtacagggcgactgtcaacggtaac
ttctttatgcaaatcacggaaaaggatactgaaaacgagaccaaggaacaacttgaaaag
actagcaatttaaagagggctgttgcttttcagcgcggtcttcggtacattgccgaagcc
cttgttggcggcgattttgcgaacgacgtctggagcatgtacaagcaggacagcgcaatg
gtcgagcctggctgtgaggcacgtctccgagaaagtgagaccaaattaaaggaaaagagg
cctgttctcgtcggtcacaacatgtttcacgacctgtgctttttgcatgccacatttttc
agtccgttgcccgacacactcgacgagtttgaccgcatcgtgcatgaattgttcccgcgt
atcatagacacgaagcacatactcaagcgcgacgacaacgaaatgatgccgtcgaaaagc
ctcgaggaggcgtttgttgacattgagggggttagttcgcctttcaaaattgccggcgag
agagccggccacacagacaggctgcatcatgtgaacgagcaccaggccggccatgacagc
tataaaacgtcaatggtctttctcaaagagatgtggagacgggtcgactcgacgaagaaa
ggcacctatgcacacaagttgctgctgtgggagaacagcctcgtcaaagggtttgcgaac
aaggtgcggctgggcaacgccgggctctggcctgttgggcaaatgggagagtgtgacaca
atggcgaaatag
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integrated database retrieval system