Sporothrix schenckii: SPSK_05168
Help
Entry
SPSK_05168 CDS
T05555
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
ssck
Sporothrix schenckii
Pathway
ssck03082
ATP-dependent chromatin remodeling
ssck03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SPSK_05168
03083 Polycomb repressive complex
SPSK_05168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssck03036
]
SPSK_05168
Chromosome and associated proteins [BR:
ssck03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
SPSK_05168
Histone modification proteins
HAT complexes
HATB complex
SPSK_05168
HDAC complexes
Sin3A-HDAC complex
SPSK_05168
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
SPSK_05168
PRC2.2
SPSK_05168
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
SPSK_05168
Heterochromatin formation proteins
Other heterochromatin formation proteins
SPSK_05168
Chromatin remodeling factors
NuRD complex
SPSK_05168
NuRF complex
SPSK_05168
NuRF complex (fruit fly)
SPSK_05168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_RFWD3
WD_LRWD1
Beta-prop_EML
MIOS_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
27667195
NCBI-ProteinID:
XP_016583802
UniProt:
A0A0F2LZ08
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MGPQGAQVSDDVDVDMQNDEGISIDQEQRVINEEYKTWKKNSPFLYDMILSNALPWPTLT
TQWFPDVKVLEEKKSRVYRLLLGTHTSEDLPNYLQIAEVSIPMLSEPNVNDYDEERGEIG
GYGNKGSSGANSGSGSGSGSNGAGGSNGAAPSISFNIVQRIDHPQEVNKARYQPQNPDIL
ATLCVDGRVLIFDRTKHSLTPSGTVNPQFELVGHKQEGFGLAWNPHEAGCLASGSEDTTV
CLWDLKQATAGSKTIKPARRFTHHKNIVNDVQYHPISKSFLGSVSDDMTLQVVDIRQATS
DKAALVARDGHTDAINALAFNPTSEYIVATASADKTIGLWDLRNVREKVHTLEGHNDAVT
SLAWHPHEAAILGSGSYDRRIIFWDLSRVGEEQLPDDQEDGPPELLFMHGGHTNHLADFS
WNPNPADSWLVCSAAEDNLLQIWKVADSIVGRDDADLPVDEMDR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgggcccccaaggcgcacaggtctcagacgacgtggatgtggacatgcagaacgatgag
ggcatcagcattgatcaggagcagcgggtgatcaacgaagagtacaagacgtggaagaag
aacagtccattcctttacgacatgatcctgagcaatgctctaccatggccgactctgacg
acacagtggtttcccgacgtcaaggtgctcgaggagaagaagtcgcgtgtctaccggttg
ctgctcggcacgcacacgtccgaggacctgcccaactacctgcagatcgctgaggtctcg
atcccgatgctgagcgagccaaacgtgaacgactatgacgaggagcgcggcgagattggc
ggctacggcaacaagggctccagcggagccaacagcggcagcggtagcggcagcggcagc
aacggcgcaggcggcagcaacggtgcggcaccgtccatcagcttcaacattgtccagcgc
atcgaccacccgcaggaggtcaacaaggcgcgctaccagccgcagaacccagacattctg
gcgacgctctgcgtcgacggccgcgtcctcatcttcgaccgcaccaagcacagcttgacg
ccctcgggcaccgtgaacccgcagtttgagctggtaggccacaagcaggagggctttggc
ctggcgtggaacccacacgaggccggctgcctggcgtccggcagcgaggacaccactgtg
tgcctctgggacctcaagcaggccacggccggcagcaagaccatcaagcccgcacggcgc
ttcacccaccacaagaacattgtcaacgacgtgcagtaccacccaatcagcaagagcttc
ctgggcagtgtgtcggacgacatgaccctgcaggtggtcgacattcggcaggcgacgagc
gataaggcggctctggtggcacgcgacgggcacacggacgcgatcaacgcgctcgccttc
aacccgaccagcgagtacattgtggccacggcgtcggcggacaagacgatcggcctgtgg
gatctgcgcaacgtgcgcgagaaggtgcacaccctcgagggccacaacgacgccgtcacg
tcgctggcgtggcacccgcacgaggctgccattctgggtagcggctcgtacgaccgccgc
atcatcttctgggacctcagccgcgtcggtgaggagcagctgcctgacgatcaggaggac
ggtcccccggagctgctgttcatgcacggcggccacacgaaccaccttgccgacttcagc
tggaatcccaacccggccgactcgtggctggtctgcagcgccgccgaggacaacctactg
cagatctggaaggttgccgactcgattgtcggccgcgacgacgcggacctgcccgtggat
gagatggaccgctag
DBGET
integrated database retrieval system