Sporothrix schenckii: SPSK_05267
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Entry
SPSK_05267 CDS
T05555
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ssck
Sporothrix schenckii
Pathway
ssck03013
Nucleocytoplasmic transport
ssck03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPSK_05267
03015 mRNA surveillance pathway
SPSK_05267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_05267
Enzymes [BR:
ssck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPSK_05267
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SPSK_05267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
27667294
NCBI-ProteinID:
XP_016583835
UniProt:
A0A0F2LWF1
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MADLASRITRPDGAAADTPAAAAPVEDTPVDTAGPGLIESTYDVEVKLSELGSLTDNPLS
SVSSFEELGLKKSIIDGLFALNFKKPSKIQERALPLLLADPPCNMIAQSQSGTGKTAAFV
VTLLSRVDFSQPTTPQALALAPSRELARQIESVINQIGQFCEGLNVAAAIPGAVERGAAV
QANVVVGTPGTVMDLMRRKQLDVSQLKLLVIDEADNMLDQQGLGEQCVRVREKLPRSIQV
LLFSATFPEKVMRYAEKFAPNANQMRLRQQELTVRGISQMYMDCPSETEKYDVLCKLYGL
MTIGSSVIFVKTRQSANEIQQRMEADGHRIAALHGAYEGESRDTLLNDFRTGKSKVLITT
NVLARGIDVSSVSMVINYDIPMKGMGDREPDAETYLHRIGRTGRFGRVGVSISFVHDRKS
FTALADIANHYGIDLIQLSPDDWEETEKKIRHILKSARAQPEYKPTSAEAAASAAQGP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctggcaagccgcattaccaggccggacggcgccgcggcagacacgcctgct
gcagccgccccggtcgaggatactcccgtcgacaccgctggtcctggcctcattgagtct
acctacgacgtcgaagtcaagctcagcgaactgggctcgctgactgacaacccgctgtcg
tctgtctcatcctttgaagagctgggcctgaaaaagtccattatcgacggcctgttcgcc
ctcaatttcaagaaaccgtccaagattcaggaacgtgctctgccgcttctcctcgcagac
ccgccatgcaacatgattgcacagtcgcaatcgggtacgggcaagacggccgcttttgtc
gttacattactttcacgtgttgatttcagccagccgacgacgccgcaagccctggctctg
gcgcctagccgtgagctcgcacggcagatagagtcggtgatcaaccagattggtcagttc
tgcgagggcctgaatgtggctgctgcgattcctggcgctgtcgaacgcggtgccgctgtg
caggccaatgtcgtcgtgggcacgcctggtaccgtcatggacctcatgcggcgcaagcag
ctggatgtgtcgcagctgaagctccttgttattgacgaggcggacaacatgcttgaccag
caggggctcggcgagcagtgcgtgcgcgttcgcgagaaacttccgcgttccatccaggtg
ttgctgttctcagccactttccccgaaaaagttatgcgctatgcggagaagtttgcaccg
aacgccaaccagatgcgcctgcgccagcaggagctgactgtgcggggtatctcacagatg
tacatggactgcccctctgagacggagaagtacgatgtgctgtgtaagctgtacggcctg
atgacgatcggctcgtcggtcatctttgtcaagacgcgccagagtgccaacgagatccag
caacgcatggaagccgatggccaccgcattgctgcgctgcatggcgcgtacgagggcgag
agccgtgatacgctgctcaacgacttccgcacgggcaagtccaaggtgcttattaccaca
aacgtgttggcgcgtggcattgacgtgtcgagtgtgtcgatggtgattaactacgacatc
ccgatgaagggaatgggcgaccgtgagccggatgctgagacgtacctgcatcgcattggc
cggacgggtcgcttcggccgtgtcggcgtcagtatcagtttcgtgcacgaccggaagagc
ttcaccgcgcttgcggacattgccaaccactacggcattgacttaatccagctgagtcct
gacgactgggaggaaacagagaagaagattcgccacatcctgaagtcggctcgtgcccaa
cccgagtacaagcccacatctgccgaagctgctgcttccgctgcgcagggaccttag
DBGET
integrated database retrieval system
