KEGG   Sporothrix schenckii: SPSK_05568
Entry
SPSK_05568        CDS       T05555                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
ssck  Sporothrix schenckii
Pathway
ssck03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPSK_05568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssck03019]
    SPSK_05568
Messenger RNA biogenesis [BR:ssck03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     SPSK_05568
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     SPSK_05568
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 27667588
NCBI-ProteinID: XP_016583386
UniProt: A0A0F2LW35
LinkDB
Position
Unknown
AA seq 229 aa
MAAVASTGQVTVPGQHLGLASQYLPGPGTHLADGHVFASLLGHVQIAKSAEAVAADKKSA
AAPSGPAKRLTRIEVPTAASAAGSIDRRPTISVSRAAVADGGEVLPDVGNTVLCRVTRIT
QKQAVVAILVVGETVLDTEWQGLIRTQDVRATEKDRVKIYESFRPGDIVRAQVISLGDQA
NYYLSTASNALGVVMATSETGSPMYPVSWKEYIDPETGLSELRKVARPF
NT seq 690 nt   +upstreamnt  +downstreamnt
atggctgccgtggcttccactggacaggtgactgtccccgggcagcacctcggtctggcc
agccagtacctcccaggccctggaacacacctcgcggacggacatgtatttgcctcgctc
ttgggacacgtgcagattgccaagtcggcagaggccgtcgcagcagacaagaagagtgct
gcggctccctccggcccggcgaagcggctcacgcgcatcgaggtcccgacagcggcatcg
gcagccggcagcattgatcgcagaccgacgatttccgtgtcccgtgcggccgttgcggat
ggcggcgaggtcttgccggacgttggaaacacggtgctgtgccgtgtgacccgcatcacg
cagaagcaggcggtggtggccatcctggtggtgggcgagacggtgctggacacggagtgg
cagggactgatccggacgcaggacgtgcgggcgacggagaaagaccgggtcaagatctac
gagtcgttccggcctggcgacattgtgcgggcgcaagtgatttcgctgggcgaccaggcc
aactactacctgtcgacggcgagcaatgcgctgggcgtggtgatggcgacgagcgagaca
gggagcccgatgtacccggtcagctggaaggagtacatcgaccccgagacaggcctgagt
gagctgcgcaaggtggcaagacctttttga

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