Sporothrix schenckii: SPSK_05810
Help
Entry
SPSK_05810 CDS
T05555
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_05810
03036 Chromosome and associated proteins [BR:
ssck03036
]
SPSK_05810
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
SPSK_05810
Chromosome and associated proteins [BR:
ssck03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
SPSK_05810
SLIK complex
SPSK_05810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Chromo
Helicase_C
CHD1-like_C
HDA2-3
ResIII
Cdh1_DBD_1
DEAD
Chromo_MIT1
AAA_22
Motif
Other DBs
NCBI-GeneID:
27667798
NCBI-ProteinID:
XP_016592092
UniProt:
A0A0F2MMK6
LinkDB
All DBs
Position
Unknown
AA seq
1798 aa
AA seq
DB search
MLTSPSITRYHRITCLNMSASPASSPVNGHASPAPETPTANGTAGHLSDSDLSDVEPTTY
TNAASSSASAAPEEYDDDEEDDDLAVANDFEDEPSEPSDNDTSDDADFDDAQSDADADAD
ADADPDLDVAALDRDEESPASSDSGHAPKRKASAMLAEDEYMRSNPELYGLRRSSRPVLR
RKIVSDDDDSDDQPVVRRKPKPRRLLETSRQSSKRGTPARNTSVDESDSDNYGGARARSF
QKKARRKQEAQPSLAFAEKRWSSRRAAQVSVGKYNESDFEDDEDDTTPVQWVPEVEDNSP
YIEKIVRHREKEGVTITPDSNRHDYEYYVKWQGKSHLHDTWETTASVAGFRGFRRLENYY
RKIVEFELDMRFGGDDYSPEQREQWLLDREREEQAHEDYTKVERVVAKRNGEEGVEYFIK
WKGLQYDECTWEAAETVSEHAQDKVDQFLDRSSRSWTSDRTETSLNTRSRMTKLDTQPSY
IKNGELREFQMKGLNFLALNWTRGNNVILADEMGLGKTVQSVSFLSWLRNDRGQEGPFLV
VAPLSVIPAWCDTFNHWAPDLNYVVYLGPESARNVIRDYELLVDGNPKKHKFNVLVTSYD
FILQDWEFLKSIKWQVLAVDEAHRLKNRESQLYSRLVSFNIPCRVLITGTPIQNNLHELS
ALLDFLNPGKVVIDDDLVQLGMADQKTEEENDDDDKRRETQEKLTSFHAAIAPFILRRTK
ETVESDLPPKTEKIIRVELSDVQLDYYKNILTRNYAALSDASGGQKQSLLNIMMELKKVS
NHPYLFPGVEESVLKGSERREDQIKGLIASSGKMMLLDQLLTKLKKDNHRVLIFSQMVKM
LDLLSDYLRVRGHTFQRLDGTIPAGPRRMAIDHFNAEGSDDFCFLLSTRAGGLGINLMTA
DTVIIYDSDWNPQADLQAMARAHRIGQKRPVNVYRLVAKQTIEEEVIKRARNKLFLEYLT
IQAGVTDEGKELREQFKEKGLKIDEAKTAEDIQWILKMRSQNLFEQSGNQEKLEQLDIDS
ILENAEVTKTNVDDKLNLSSGGIDWDNWMQVTDVKVDELALDWDQIIPADKLAVIKSEEE
KRLHEEYLNKAMEENAPRRATLKKRNAAAVNDSDRADRLAKKRQREKQEQEEYEERQAAL
RDPRRPLNEKETRNLIRALFRYGSFEDRGEEIIADARLGDRDRDFMRSVVEDLVSMSQQA
VDANLARIREEQEKAGKALARKDKKAVLIDFGEVKKINAETLVERPPQLRLLRKVLDEHG
NPHSFRLHDASKAAHYTCEWGAREDGMLLVGIDRYGFGAWTQIRDDPELDMADKFFLEEH
RVEKKEERKKGDEKSISSPGAVHLVRRSEYLLSVLLAKYSNDAAAQKAVENHHRSKKTVN
GHRRGDDLSRSPVPAKRSSMLKNREQRDRPISNSDYLNLRPQNNTSGGGERLLTPRSDFK
RKHEHDHNDRDRKQRRIVDGDRRDSNGVGPSSHKDGQPKEKRKKLDAETLEQLKAAQSKA
VLRFEELMKLDDSKLDYRDDEQVMWSLLKPVRDNFKTIMETTPERVEKAKERAAIMGKEL
RQIGDCVIGLKKNQTIPAATLDALMPRFWDFLSSIWPINEVAVSGSQLSKMYEALRAKDE
KGSGGGSTSNNGSSRPDRSSRDDLEDGEIDSERDSHRDSRRDHEHRDSRDSRESHEHHDR
DRDRDRDRDRERDRDRDRNRDRERDRGGDRGRDRERERERDRDAFRRSAGLLGDLRRDDR
HGSSESRSSPYAAETGDRLSFRKDPRRDYQPQREWDRLRPTPWQQQQQQYTASRPNPY
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgccgtccatcaccagatatcataggatcacgtgtctaaacatgtcggcc
tcgccagcatcgagtccagtcaatggacacgcgtctccggcacccgaaacacccacggca
aatggcactgctggccacctgagcgacagcgacctgtccgacgtcgagcccaccacatat
acaaacgcggcatcctcttcggcatctgcggcaccagaagagtacgatgacgacgaagaa
gacgatgatctagctgtcgcgaatgactttgaagacgagccgtcggagcctagcgacaac
gatacctcggacgacgccgactttgacgacgcacaaagcgacgctgatgccgatgctgat
gccgacgcggatcccgacctagacgtcgccgcccttgaccgcgatgaggaaagtccggcc
tcgagtgactctggtcacgcgccaaaacggaaggcaagcgcaatgcttgctgaggatgaa
tacatgcggagcaacccagaactctacgggttgcggcgtagttcacggcccgtactgcgg
cgtaagattgtgtcggacgatgacgactcagacgaccagcccgtggttcgccggaagccg
aagccacgacggctgctcgagacatcacgccaatcttcgaaacgaggtactcctgcacgg
aacacatctgtcgacgaatcagactccgacaactacgggggcgcccgtgcccgcagcttt
caaaagaaggcgcgccgcaagcaggaagcccaaccgtcgctggcctttgccgagaagaga
tggtccagccgtcgcgctgcccaggtatctgtcggaaaatacaacgagagcgattttgag
gacgacgaagacgatacgacgcctgtccagtgggtacccgaagtggaagacaactctccc
tacatcgagaagatcgtccgacaccgggaaaaggaaggcgtcaccatcacgcccgactcc
aaccggcatgactacgaatactacgtcaagtggcaagggaagtcccatttacacgacacg
tgggagacaactgcgtctgttgccggtttccgtggctttcgtcgactcgagaactattac
cgtaagattgtagagttcgagctcgatatgcgcttcggtggtgatgactacagcccggag
caaagagaacaatggctgctcgaccgtgagcgcgaggaacaagcacacgaggactacaca
aaagtagagcgcgttgtggccaagcgcaatggcgaggagggcgtcgaatactttatcaag
tggaagggcctccaatacgacgaatgcacatgggaagctgcggagactgtcagcgaacat
gctcaggacaaggtcgaccagttcttggatcgctcgtctcgatcctggacgtccgaccgg
acagagaccagcctcaacacacgctctcgcatgacgaagcttgacacccagccgtcctac
atcaagaacggtgagctccgcgagttccaaatgaaaggtctcaacttccttgccctgaat
tggacgcgaggcaacaacgtcatcctcgccgacgagatgggtctgggcaagaccgtacag
tctgtatccttcctcagctggctacgcaacgaccgtggacaagaagggcctttcctcgtc
gttgcgcccctcagcgtcatccctgcgtggtgcgacaccttcaaccattgggcgcccgat
ctgaactacgtcgtttaccttggccctgaatccgcgcgcaatgtgatccgcgactacgaa
ctgcttgtcgacggcaaccccaagaagcacaagttcaacgtcctcgtcacttcgtacgac
ttcattctgcaggactgggagttccttaagagcatcaagtggcaggtattggctgtcgac
gaggcgcaccgtctcaagaaccgtgagtcgcagctctacagccgccttgtcagcttcaac
atcccatgccgcgtcctcattaccggtacgccaatacagaataacttgcacgagctctcg
gcccttcttgatttcctcaaccctggcaaggtcgtcatcgacgatgacctcgtccagctt
ggaatggcagatcaaaagacagaggaagagaacgatgacgatgacaagcgccgtgagacg
caagagaagcttacaagcttccacgcagccatcgctccctttattctacgccggaccaag
gaaacagtcgagtcagacctgccgcccaagacggaaaagatcattcgtgtcgagctttcg
gatgttcaactggactattacaagaacattctgactcgcaactacgccgccctcagcgac
gcaagtggtggccagaagcaatcgctgctgaacatcatgatggagctgaagaaagtcagc
aatcatccttacctgtttcccggcgttgaagagagcgttctcaagggcagcgagcgccga
gaagaccaaatcaagggtctcattgccagcagtggtaagatgatgcttcttgaccagctt
ctgacaaagctcaagaaggacaaccaccgtgtcctcatcttcagtcagatggtgaaaatg
cttgaccttctaagcgattatctccgtgtccgtggccacacgttccaacgtcttgacggc
actatccccgccggtccgcgccgtatggccatcgaccatttcaatgccgagggcagtgac
gacttctgcttccttctctccacccgtgctggtggtcttggcattaaccttatgaccgcc
gacacggtcatcatctacgactccgactggaaccctcaagctgatttgcaggccatggcg
cgtgcgcatcgtatcggccaaaagcgcccggtcaacgtctaccgcctcgtcgcaaagcaa
accattgaggaggaagtcatcaaacgcgcccgaaacaagttgttccttgagtacctgacg
attcaggcaggcgttacggacgaaggcaaagaattgcgggagcagttcaaagagaagggc
ttgaagatagacgaggccaagacggccgaggacatccagtggattctcaagatgcgctcg
cagaacttgtttgagcagtctggaaaccaagaaaagctcgagcagctggatatcgacagc
atcctcgagaacgctgaggttaccaagaccaatgtcgacgacaagctgaatctgagttcc
ggtggcatcgactgggataactggatgcaagttaccgatgttaaggtggacgagcttgcc
ctagactgggaccagattatccctgccgataaactcgctgtcatcaagtctgaggaagag
aagcgcctacacgaggagtatctcaacaaggcaatggaagagaacgcgccgagacgggcg
accctcaagaagaggaacgccgcggccgtcaacgactctgaccgggcggaccgccttgcc
aagaagcgccaacgcgaaaagcaggagcaggaagagtacgaagaacgacaagcagctctg
cgcgatccccgccgtcctctcaacgagaaggagacgcgtaacctgattcgcgccctgttc
cgctatggatcctttgaggaccgcggcgaagagatcattgccgacgcgcgattgggggac
cgtgaccgtgactttatgcgatcagtcgtcgaggaccttgtttctatgagccagcaggct
gtcgacgccaacctcgcgcgcatccgcgaagagcaagagaaggctggcaaggcgctcgca
agaaaggacaagaaagctgttctgatcgatttcggcgaggtgaagaagatcaatgccgag
acacttgttgagcgccctcctcagcttcgtcttcttcgcaaggtgcttgacgagcatggt
aaccctcactccttccggcttcacgacgccagcaaagctgctcactacacttgcgagtgg
ggcgcacgcgaagacggcatgcttctcgtgggcatcgaccgctacggcttcggcgcatgg
acgcagatccgcgacgacccggaactagacatggccgacaagttcttcctcgaagaacat
cgcgtggagaagaaggaagagcgcaagaagggagacgaaaagagcatctcgtcgcccggt
gctgtccaccttgttcgccgctcggaatacctgctctctgtcttgctcgccaaatattcc
aacgacgctgctgcgcagaaggccgttgagaaccaccaccgcagcaagaagacggtcaac
ggccaccgccgtggtgacgatctctcccgctcgccggtgcctgccaagcggtccagcatg
ctgaagaaccgtgaacagcgcgatcgaccaatctcgaacagtgactacctcaatctccgc
ccgcagaataacaccagcggtggcggcgagcgtctgttgacacctcggagcgattttaag
cggaaacatgagcacgatcataatgatcgtgaccgcaagcaacgccgaattgtcgacggc
gaccgccgtgacagcaacggtgtgggaccaagcagccacaaggacggccagcccaaggaa
aagcgtaagaagcttgacgccgagaccctcgagcagctcaaggcggcccagagcaaggct
gtgctgcggttcgaagagctcatgaagctcgatgacagcaagctggattaccgggacgac
gagcaagttatgtggtcccttcttaagccggtacgcgacaacttcaagacaattatggag
acaacgccagagcgggtcgagaaagccaaggagcgtgctgcgattatgggcaaagagctg
cgacagattggcgactgcgtgattggcctgaaaaagaatcagaccatcccggcagccacc
ctcgacgcgctcatgccccggttttgggactttttgtcgtcgatttggcctatcaacgag
gtcgcagtgtccggaagccaactctccaaaatgtacgaagcgctccgggccaaagatgag
aagggaagcggcggcggcagcaccagcaacaatggcagcagccggcccgatcggtctagc
cgcgatgaccttgaagacggcgaaattgatagtgaacgcgacagtcacagggattcgcgg
cgcgatcacgagcaccgagacagccgagacagccgggagagccatgagcaccacgaccgc
gaccgcgaccgggatcgagatcgagaccgtgagcgtgaccgcgaccgggacagaaatcgc
gaccgcgaacgtgatcgaggcggtgaccgcggcagagaccgtgaacgtgagcgcgaacgc
gaccgcgatgcctttcgccgcagcgctgggctcttgggcgacctgcgtcgcgacgaccgc
cacggcagcagcgagtcgaggtcgtcaccctatgccgccgagacaggcgaccggctgagc
ttccgcaaggacccgcgccgcgactaccagccgcagcgagaatgggacaggctgcggccc
acgccctggcagcagcagcagcagcaatacacggcctcgcgacccaacccgtactag
DBGET
integrated database retrieval system
