Sporothrix schenckii: SPSK_05823
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Entry
SPSK_05823 CDS
T05555
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_05823
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
SPSK_05823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
Rrp44_CSD1
CSD2
GRP
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
27667811
NCBI-ProteinID:
XP_016591756
UniProt:
A0A0F2MJS1
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MDQQQNNPLAGGVPGPTGRRLHIAHRRSPSEMTPLVSLYTNQSMTPAMLQQQIELLQQQQ
QQLQQYAINGMIPNQGLGAGGAFPMQPALNMSPQAGFQFPAQLPQQQQQQQPQQNVNAGI
PQQTHSHRRNQSALPNMGMGPPPAPSSGASGSTFGNFESPAHAREGGGPSSRTGRGGGGA
GGGHQRRHSLVVADARKAAEIAQQKRTTSAFQFPAPGAAAAASTSSGSEKPEGDVVVDSQ
SNPTPPPAVASRGRGSAHGRSQSMAVGRGGGGLGRGGMGNYQAESLSGTHDFQRRGGGSH
ARTNSRNFDSNWRNPAAAQDGSNNGQQQPQQPQQQPQQPQQPQQGFQPGHRSRASVGGGQ
SISSIGAYPQLLQLQGGQMMIPGAFPGQQQLNQLNPMQLGQLQAMQQINAQQFLGLQNSQ
HAAQGQVQQNQAQQQQRKTLFTPYMPQATLPPLLQNGALVQGILRVNKKNRSDAYVTTAD
LMADIFICGSKDRNRALEGDLVAVELLDVDEVWAQKREKEEKKKRKDITDTRSGSTNGNG
EGNNGSGIGNGGGSLNNGSDGGIRRRGSLRQRPTQKKNDDVEVEGQSLLLVEEEEINDEQ
KPLFAGHIVAVVERIAGQMFSGTLGLLRPSSQATKDKQDADRNNSRHGDNRNQDKPKIVW
FKPTDKRVPLIAIPTEQAPRDFVEKHQDYADRIFVACIKRWPITSLHPFGTLVELLGHMG
DVQTETDALLRDNNFASDEFSDAVLRSIHADWGTSGPCKEDEADMKERRDFRDEKTFTID
LDGTPNLGNAVHVKSGTDGKIEIGVHIPHVAHFVKPASLVEREAKKRGTSVHLLNRTCAL
LPPRLATDLCSLLPNEDRLTLSVVVQVDAHTGVAADEDIWVGKSVIKSNGKLSLASMNKA
LANANGFEHNAASAKDIQILRLVTDKFREARLGSAGEPVAPLRLVQQLDDENIPIEHNIF
DTTPAVELVEELMHKVNAHVAKLLAEGLPQKALLRRHAEPNSRRLQTIVERLTALGYDID
TTTSGTLQNSLFKVEDADIRKGMETSLVKSMQRAKYFVCGGKSRQEWMHYGLNLPVYTHS
TAPTRRVVDIIVQRQLLAVLSGNPDSFEDDTLAKTVDSCNVKKDSAQNAQEQSVHIDSCR
IMDKKRLETHGDLISEGIVLCVYESAFDVLIPEWGFEKRVHCDQLPLKKAEFRKDKRVLE
LYWEKGVTSSSYVPEDERVRSGPSTRIRDAANAQQQHEEAERQRHEREEAARKQIDTGTI
STDDTDALFDDDEDNGSDITEAMAGASLAERPTQSVPGSPSRPEVGGGADAALQRAQSER
VPASESPESRLTDKEKYLKLFSLREEDGEYIQDVTEMTRVPIILKTDLSKSPPCLTIRSV
NPYAL
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagcagaacaacccgctcgctgggggcgtccccgggccgactggccgccgc
ttacatattgcacaccgacggagtccgtctgaaatgacgccgctcgtcagcctgtatacc
aaccaaagcatgacccctgctatgctccagcagcagattgagcttctgcaacagcagcag
cagcagcttcaacagtatgccataaatggcatgatcccaaaccaaggccttggcgcaggc
ggtgcctttcccatgcagcccgctctcaacatgtcgccacaggccggctttcaattcccg
gctcagctgccgcagcaacagcagcagcagcaaccgcaacaaaacgtcaacgcgggtatt
ccacagcagacccactcacatcgccgtaatcagtcggctctccctaacatgggaatgggc
ccgcctccggccccatcgtcgggcgcctctggctctacctttggtaattttgaaagccca
gcccacgcccgagagggtggcggcccgagctcgcgtaccggtcggggtggtggcggtgct
ggtggtgggcaccagcgtcgccattcgctcgttgttgccgacgctcgcaaggcggccgag
attgcccaacaaaagcgcactacgtccgcttttcagttccctgctcctggtgccgccgct
gctgcctccacttcgtctggtagcgagaagcccgagggagatgtcgtcgtggacagccag
agcaacccgactccccctcctgccgtggcatcccgtggccgcggatccgcccatggtcgc
agccaaagtatggcggtcggtcgtggcggcggtggcctaggtcgcggcggcatgggcaac
taccaggccgagtcgctcagcggaacacatgacttccagcgccgcggtggcggcagccat
gcgcgcaccaactcgcgcaactttgatagcaactggcgcaacccggcagcagctcaagac
ggtagcaacaatggccagcagcagcctcagcagcctcagcagcagccccagcaaccccag
caacctcagcagggctttcaaccgggccatcgctcgcgtgcttctgtgggcggcggccag
tcaatcagctccattggcgcatacccgcaactgctgcagctacaaggtggccagatgatg
atcccgggtgccttccctggccagcagcagctcaatcagctgaaccccatgcagctcggc
cagctccaggccatgcagcagatcaatgcccagcagtttctcggtctgcagaacagccag
cacgctgcccaaggacaagtgcagcagaaccaggcacagcagcagcagcgcaagaccctg
ttcactccgtacatgccccaggccaccctaccccctctcttgcagaacggtgcactggtg
caaggcattcttcgtgtcaacaagaagaatcgcagcgatgcatatgtgaccacggcagac
ctgatggcggatatcttcatctgcggaagcaaagatcggaaccgtgcccttgaaggcgat
cttgttgcggtcgagctgcttgacgtcgacgaggtctgggctcagaagcgtgagaaggaa
gagaagaagaagcgcaaggacatcacagatacccgctctggctcaacaaacggtaatggc
gaaggcaacaacggctccggcatcggcaacggtggcggcagtctcaacaacggcagcgac
ggtggcatccgccgtcgtggtagtctccgccagcgcccgacccagaagaagaacgacgac
gtcgaagtcgagggccagagtctgctgcttgtcgaggaagaagagatcaacgacgaacag
aagccgctctttgccggccacatcgttgccgttgtggagcgcattgccggtcagatgttc
tccggcacgctcggcctgctgcgcccgagcagccaggccaccaaggacaagcaggatgca
gaccgcaacaattcacgccacggcgacaaccgtaaccaggacaagcccaagattgtgtgg
ttcaaaccaaccgacaagcgcgtgccgctgattgcaatcccaacagagcaggcgccgcgc
gactttgttgaaaaacaccaagactacgctgatcgcatctttgttgcctgcatcaagcgc
tggccgattacgtcgctgcatccttttggcaccctggtcgagctgctgggccacatgggc
gatgttcagaccgagaccgacgcactattacgggacaacaactttgcgtcggacgaattc
tccgacgctgttcttcgcagcatccacgctgactggggcacctctggcccctgcaaagag
gacgaagcggacatgaaggaacgccgcgattttcgcgacgagaagacgttcacgattgac
ctggatggcacacccaaccttggcaatgccgtgcacgtgaagtctggtaccgacgggaag
attgaaatcggtgtccacattccccacgtcgcgcattttgtcaagcccgcctccctggtc
gagcgcgaggctaagaagcgtggaactagcgtgcacctgctgaaccgtacgtgtgctttg
ctgccacctcgtctggccaccgacctgtgctcgctcctgccgaacgaggaccgtctcacg
ctcagtgtcgtcgtccaggtcgatgcacacacaggcgttgccgccgacgaggacatttgg
gtcggtaagagtgtcatcaagagcaacggcaagctgtctcttgccagcatgaacaaggcg
ctggccaacgccaacggattcgagcacaacgcggcatccgccaaggatattcaaatcctg
cgcctagtgaccgacaagttccgcgaggcacgactaggctcggccggtgagccggtggcc
cctctgcgtctggtgcagcagctcgatgatgagaacatccctattgagcacaacattttc
gacaccactcctgccgtagagctggtcgaagagctcatgcacaaggtcaacgcgcacgtc
gcaaagctgctggccgagggccttccccaaaaggccctgctgcgccggcatgcggagccc
aactcccggcgcctgcaaacgattgtggagcgcctgaccgctctgggctacgacattgac
acgaccacgagcgggacgcttcaaaacagtctattcaaggtggaggatgcagacattcgc
aagggcatggagacatccctggtcaagtcgatgcagcgcgccaagtattttgtttgcggc
ggcaagtcgcggcaagaatggatgcactacggtctcaatctgcccgtttacacgcactcc
acggcgcccacacgccgagttgtcgacatcattgtccagcggcagcttcttgcggtgctg
tctggtaatcccgactcgttcgaggacgataccctggccaagacggtcgactcttgcaac
gtcaagaaggactcggcgcagaacgcgcaggagcagagcgtgcatattgactcgtgccgt
atcatggacaagaagcgcctcgagacgcacggcgacctgatttccgaaggtatcgtcctc
tgcgtgtacgagtcggcctttgacgtgctcattcccgaatggggctttgagaagcgcgtg
cactgcgaccagctgcctctgaagaaggctgaattccgcaaggacaagcgcgttctggag
ctgtactgggagaaaggtgtgaccagctcgtcgtacgttcccgaagacgagcgtgtgcgg
tctggcccgtcgacgcgcatcagagacgctgcgaacgcgcaacagcagcatgaggaggct
gagcgccagcgccatgagcgcgaggaggctgctcgcaagcagattgacacgggcaccatc
tcgacggacgacacggacgctctgtttgacgatgacgaggataacggctcggacattacg
gaggccatggctggcgcgtcgcttgccgagcgcccgacgcagagcgttcctggctcgccg
tcgcgtcccgaggtcggcggcggcgcggacgccgccctccagcgtgcgcagtctgagcgc
gtgcctgcgtcggagtcacccgagtcccgcctcacggacaaggagaagtacctcaagctg
ttcagtctgcgtgaggaggatggcgagtacatccaagatgtaacggagatgacgcgtgtg
cccatcatcctcaagacggatcttagcaagagcccaccgtgcttgacgatccgctccgtc
aacccttacgctttgtaa
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integrated database retrieval system
