Sporothrix schenckii: SPSK_05916
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Entry
SPSK_05916 CDS
T05555
Name
(RefSeq) pre-mRNA-processing factor 40
KO
K12821
pre-mRNA-processing factor 40
Organism
ssck
Sporothrix schenckii
Pathway
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_05916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssck03041
]
SPSK_05916
Spliceosome [BR:
ssck03041
]
Complex A
U1 snRNP components
U1 related factors
SPSK_05916
Complex B
SPSK_05916
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
27667901
NCBI-ProteinID:
XP_016592090
UniProt:
A0A0F2MK05
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MSGANGEQSPAAGAAAPAAVATSAVAGWVEYRNADGRVYYHNAAMGKTQWTKPEEMLTPV
ERALLNQPWKEYTAEGGRKYWFNTETQKSSWDMPEAYKKALGHDSTPATPATPVAIPTGP
AAQRDRRDYQRDYRENIPESRQLAYGNGHDAPSAAGALVPTNSDNLPDYPNAEEAEAAFV
KLLRRSGVQPDWSWEQTLRAIVRDPQYRAIRDAKARRAAFDKYCTEVIANDKERAKERLT
KLRADFATMLKSHPEIKHSTHWRTARPMIEGETIFRSTSSEAERRQLFDDYVDELRRAHR
EQRTAARKTAMDGLVELLPKLNLEPYTRWADARPIIEATPPFVNDEKYQSLSKFDVLTVF
QNHMKALERTFNDARQQEKTAKLRRERKNREAFAALLGDLARDGKIKASSKWSQIFPLVQ
HDPRYLALVGQSAGSTPQELFWDLVDEEQRALRGTRNDVEDVIDDKHFEVTPKTTFDSFL
DVMKDDRRTANIDREVLALIFERLQERRKEKRSDDDRLQRRALDDFRALLKRVDPPLTAT
DTYDKVKPRLQKSEEYLAVSSDEAREAAFDKYVRRLRDRDDDVGERDKERIKQRRDRRDR
SVDDRERDRDRERDRDRDRDRDRRHRGSRLGGRSHSPEADSYEADRRRAMAERERNYRKS
SVAAESLDGRDRERDRSRGDRDRDRDRRDRDRDRDYIRDRERDRDRDRDRLRDRDRERDR
DRERDRDRERERDRERDRDRDRDHLRGDTESHYDRERREREEERERQYRRRLADRNPAEL
NYGDDKPPSVRRRTREDDDAADRRDSRDSKRLRRDSPRERTPLTRASTPAAPSSAPTAAA
GDNGKSKLTTAKATKPKSKSAAAAAGAHGEDMHSGSEEGEIEED
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcaaacggcgagcaatcgcctgcagccggagctgctgcaccggcggccgtt
gcgacatcggccgttgccggctgggtcgagtaccgcaacgctgatggacgtgtctactac
cacaatgcggcgatgggcaagacgcaatggacaaagccggaggagatgttgacgccagtc
gagcgagcccttctaaatcagccgtggaaggagtacacggccgagggcggtcgcaagtac
tggttcaacaccgagacccagaagagctcgtgggatatgcccgaagcgtacaaaaaggca
ctcggtcacgactcaactccagcaactccagccacccccgtggccatcccgacgggacca
gctgcccagcgcgaccgacgcgactaccagcgcgactaccgcgagaacatacccgaatcc
cgccagctggcttatggcaacggccacgacgcaccgagcgccgcgggcgcgctcgtcccg
accaacagcgacaacctgcccgactaccccaacgccgaagaggccgaggccgcgttcgtc
aagctcctgcggcgcagcggtgtccagcccgactggtcctgggaacaaaccctgcgtgcc
attgtgcgcgacccacagtaccgcgccatccgcgacgccaaggcccgtcgcgccgcgttc
gacaaatactgcacagaggtcattgccaacgacaaggagcgcgccaaggagcggctcacc
aagctacgtgccgacttcgctaccatgctcaagagccacccggaaatcaagcattctact
cactggaggacagcgcggcccatgatcgagggcgagaccatcttccgctctaccagcagc
gaggccgagcgccgccagctgtttgacgactacgttgacgagctgcgccgcgcccaccgc
gagcagcgcactgccgcccgcaagaccgccatggacgggctcgtcgagctgctgcccaag
ctcaacctcgagccctacacccgctgggctgacgcgcgccccatcatcgaggccacgccg
ccctttgtgaatgacgagaagtaccagtctctcagcaagtttgatgtcctgaccgtgttt
caaaaccacatgaaggccctcgagcggaccttcaacgacgcccgccagcaagaaaagacg
gccaagctgcgccgcgagcgcaagaaccgcgaggcctttgccgctctgctgggcgacctg
gcccgcgacggcaagatcaaggctagcagcaagtggtcacagatcttcccgctcgttcag
cacgacccgcgctaccttgccctcgtcggccagagcgccggctccacgccccaggagctg
ttctgggacctcgttgacgaggagcagcgtgccctgcgcggcacccgcaacgacgtcgag
gacgtcatcgacgacaagcactttgaggtcacgcccaagacgacgtttgactccttcctt
gatgtgatgaaagacgatcgccggactgctaacattgaccgagaggttcttgcactaatt
ttcgagcgactgcaagaaaggagaaaggagaagcgatccgacgacgaccgcctgcaacgc
cgggcgctggacgacttccgcgccctgttaaaacgcgtggatccgcccctcacggccacg
gatacctacgacaaggtgaaaccccgtctccagaagagtgaagaatatttggctgtctcg
tccgatgaggctcgtgaggccgcctttgacaagtacgtgcgtcgcctccgtgacagggat
gatgacgtcggcgagcgtgataaagaacggatcaagcagcgtcgcgatcgccgagatcgc
tcggtagacgaccgtgagcgtgaccgggaccgggagcgtgaccgggatcgggaccgggat
cgagaccgacgtcaccgtggttcccgtctcggtggccgctctcactcacccgaggccgac
tcctacgaggccgaccgtcgtcgcgccatggccgagcgtgaacgcaactaccgcaaatcg
agcgtggctgccgagagccttgacgggcgggaccgggaacgcgaccggtcgcgtggtgac
cgagacagagaccgggaccggcgcgacagagaccgcgatcgtgattatatccgtgatcga
gagcgggatcgggaccgggaccgggatcggctgcgcgaccgtgatcgggaacgagaccgg
gaccgagagcgcgatcgtgacagagaacgcgaacgcgatcgcgaacgcgaccgggaccgt
gaccgggatcatctacgtggcgacacagaaagccactacgatcgcgaacggcgggaacgc
gaggaagagcgtgagcggcagtaccggcgtcgcctcgccgaccggaatcctgccgagctc
aactatggcgacgacaagccgccttcggtccgccgtcgcactagggaagacgacgatgct
gccgaccgccgcgactcgcgcgactccaagcgtctgcggcgcgactcaccgcgcgagcgg
acacctttgacgcgggccagcactcccgcagcgccctcgtctgctccgaccgcggcagcc
ggcgacaacggaaagtccaaattgacgactgcaaaggccacaaagccgaagtcgaaaagc
gccgccgctgccgctggcgcgcacggagaagacatgcacagcggcagcgaggagggcgag
attgaagaagactaa
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