KEGG   Sporothrix schenckii: SPSK_06182
Entry
SPSK_06182        CDS       T05555                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
ssck  Sporothrix schenckii
Pathway
ssck03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPSK_06182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssck03041]
    SPSK_06182
Spliceosome [BR:ssck03041]
 Complex C
  Other components
   Step II factors
    SPSK_06182
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_DCAF4 NBCH_WD40 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 27668166
NCBI-ProteinID: XP_016592037
UniProt: A0A0F2MMF0
LinkDB
Position
Unknown
AA seq 560 aa
MADFGDYPPNMAPQDALVVRSQAEPDHAVVPYSAEDLARPTVGPANPFRRANIGSNTQLV
RSAATGTAKRKNVLSGTATEEFVSEHTFRSKHRAVERRGGPARVVLTGDEVKAQNAAVRA
AREGKGSATVADGDGAYVGPWAKFQRKTVYDEVDENDEDDGEGYEYEYEDADEDVVESGT
VIPAPAPALARRKQLETVGDETTAFVGSEQYDYQGRTYMHVPQDLDVDLRKEVGSITNFI
PRKLVHTWKAPTPGQAVTALRLFPDSGHLMLSGSADNTVRLWDVYHQRELLRTYTGHKRA
ITDLSFNRDGTRFLTGSHDRWMKLWDTETGQCINRFRTGKTPHCLVFNPSVEGAHEFLSG
MSNNKILQWDTRAAASSNGGDGGDNVNEPVQDYDHHLAAINTITFVDENRRFMTTSDDKS
VRVWDYNIPVPISYTSEPWMYPLTRAALHPSNKYVAYQSGDNQVLVYSARDKYRQNRKKA
FKGHNNAGTAIDVAISPDGQFLASGDTSGYVCFFDWKTCKMYEKLKADPTGGSVNHVVWH
PQETSKVVTAGTHGDIKLWD
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggccgactttggcgactacccgcccaacatggcgccgcaagacgccctcgtggtacgg
tcgcaggccgagcccgaccacgccgtcgtgccctactcggccgaagacttggcgcgcccg
accgtggggccggccaacccgtttcggcgcgccaacattggcagcaacacgcagctcgtg
cgcagcgcggcgacgggcacggcgaagcgcaagaacgtgctgtcgggcacggccacggaa
gagtttgtgagcgagcacacgttccggagcaagcaccgggcggtcgagcggcgcggcgga
ccggcgcgggtggtgctgacgggcgacgaggtcaaggcccagaacgcggccgtgcgggcc
gcgcgcgaaggcaagggcagcgcgacggtggcggacggcgacggcgcgtacgtggggccc
tgggccaagttccagcgcaagaccgtgtacgacgaggtcgacgagaacgacgaagacgac
ggcgaaggctacgagtatgaatacgaggacgcggacgaggatgtggtggaaagcggcaca
gtgatcccggcgccggcgccggcattggcgcggcgcaagcagctcgagaccgtgggcgac
gagacgacggcgtttgtgggcagcgagcagtacgactaccagggccgcacgtacatgcac
gtgccacaagacctggacgtggacctgcgcaaggaggtcggcagcatcaccaacttcatc
ccgcgcaagctggtgcatacgtggaaggcacccacgccgggccaggcggtgacggcactg
cgcctgttccccgactccggccacctgatgctgagcggcagcgcggacaacacggtgcgg
ctctgggacgtgtaccaccagcgcgagctgctgcggacgtacacgggccacaagcgggcg
atcacggacctgtcgttcaaccgcgacggcacgcgattcctgacgggctcgcacgaccgg
tggatgaagctgtgggacacggagacgggccagtgcatcaaccggttccggacgggcaag
acaccgcactgcctggtgttcaacccgtcggtggagggcgcgcacgagttcttgtcgggc
atgtccaacaacaagattctgcagtgggacacgcgggctgccgccagcagcaacggcggg
gacggcggcgacaacgtcaacgagcccgtgcaagactacgaccaccacttggcggccatc
aacacgattacgtttgtcgacgagaaccggcggttcatgaccacgtccgacgacaagtcg
gtgcgggtgtgggactacaacatccccgtgcccatttcgtacacgagcgagccgtggatg
tacccgctgacgcgggcggcgctgcacccgagcaacaagtacgtggcgtaccagtcgggc
gacaaccaggtgctcgtgtactcggcgcgcgacaagtaccggcagaaccgcaagaaggcg
ttcaagggccacaacaatgcgggcacggccatcgacgtggccatcagccccgacgggcag
ttcttggcgtcgggcgacacgtcggggtatgtgtgcttctttgactggaagacgtgcaag
atgtacgagaagctcaaggcggatccgacgggcgggtcggtcaaccatgtcgtgtggcac
ccgcaggagacgagcaaggtggtgacggcgggcacgcacggcgacatcaagttgtgggat
tag

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