Sporothrix schenckii: SPSK_06182
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Entry
SPSK_06182 CDS
T05555
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
ssck
Sporothrix schenckii
Pathway
ssck03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPSK_06182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssck03041
]
SPSK_06182
Spliceosome [BR:
ssck03041
]
Complex C
Other components
Step II factors
SPSK_06182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_DCAF4
NBCH_WD40
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
27668166
NCBI-ProteinID:
XP_016592037
UniProt:
A0A0F2MMF0
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MADFGDYPPNMAPQDALVVRSQAEPDHAVVPYSAEDLARPTVGPANPFRRANIGSNTQLV
RSAATGTAKRKNVLSGTATEEFVSEHTFRSKHRAVERRGGPARVVLTGDEVKAQNAAVRA
AREGKGSATVADGDGAYVGPWAKFQRKTVYDEVDENDEDDGEGYEYEYEDADEDVVESGT
VIPAPAPALARRKQLETVGDETTAFVGSEQYDYQGRTYMHVPQDLDVDLRKEVGSITNFI
PRKLVHTWKAPTPGQAVTALRLFPDSGHLMLSGSADNTVRLWDVYHQRELLRTYTGHKRA
ITDLSFNRDGTRFLTGSHDRWMKLWDTETGQCINRFRTGKTPHCLVFNPSVEGAHEFLSG
MSNNKILQWDTRAAASSNGGDGGDNVNEPVQDYDHHLAAINTITFVDENRRFMTTSDDKS
VRVWDYNIPVPISYTSEPWMYPLTRAALHPSNKYVAYQSGDNQVLVYSARDKYRQNRKKA
FKGHNNAGTAIDVAISPDGQFLASGDTSGYVCFFDWKTCKMYEKLKADPTGGSVNHVVWH
PQETSKVVTAGTHGDIKLWD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccgactttggcgactacccgcccaacatggcgccgcaagacgccctcgtggtacgg
tcgcaggccgagcccgaccacgccgtcgtgccctactcggccgaagacttggcgcgcccg
accgtggggccggccaacccgtttcggcgcgccaacattggcagcaacacgcagctcgtg
cgcagcgcggcgacgggcacggcgaagcgcaagaacgtgctgtcgggcacggccacggaa
gagtttgtgagcgagcacacgttccggagcaagcaccgggcggtcgagcggcgcggcgga
ccggcgcgggtggtgctgacgggcgacgaggtcaaggcccagaacgcggccgtgcgggcc
gcgcgcgaaggcaagggcagcgcgacggtggcggacggcgacggcgcgtacgtggggccc
tgggccaagttccagcgcaagaccgtgtacgacgaggtcgacgagaacgacgaagacgac
ggcgaaggctacgagtatgaatacgaggacgcggacgaggatgtggtggaaagcggcaca
gtgatcccggcgccggcgccggcattggcgcggcgcaagcagctcgagaccgtgggcgac
gagacgacggcgtttgtgggcagcgagcagtacgactaccagggccgcacgtacatgcac
gtgccacaagacctggacgtggacctgcgcaaggaggtcggcagcatcaccaacttcatc
ccgcgcaagctggtgcatacgtggaaggcacccacgccgggccaggcggtgacggcactg
cgcctgttccccgactccggccacctgatgctgagcggcagcgcggacaacacggtgcgg
ctctgggacgtgtaccaccagcgcgagctgctgcggacgtacacgggccacaagcgggcg
atcacggacctgtcgttcaaccgcgacggcacgcgattcctgacgggctcgcacgaccgg
tggatgaagctgtgggacacggagacgggccagtgcatcaaccggttccggacgggcaag
acaccgcactgcctggtgttcaacccgtcggtggagggcgcgcacgagttcttgtcgggc
atgtccaacaacaagattctgcagtgggacacgcgggctgccgccagcagcaacggcggg
gacggcggcgacaacgtcaacgagcccgtgcaagactacgaccaccacttggcggccatc
aacacgattacgtttgtcgacgagaaccggcggttcatgaccacgtccgacgacaagtcg
gtgcgggtgtgggactacaacatccccgtgcccatttcgtacacgagcgagccgtggatg
tacccgctgacgcgggcggcgctgcacccgagcaacaagtacgtggcgtaccagtcgggc
gacaaccaggtgctcgtgtactcggcgcgcgacaagtaccggcagaaccgcaagaaggcg
ttcaagggccacaacaatgcgggcacggccatcgacgtggccatcagccccgacgggcag
ttcttggcgtcgggcgacacgtcggggtatgtgtgcttctttgactggaagacgtgcaag
atgtacgagaagctcaaggcggatccgacgggcgggtcggtcaaccatgtcgtgtggcac
ccgcaggagacgagcaaggtggtgacggcgggcacgcacggcgacatcaagttgtgggat
tag
DBGET
integrated database retrieval system