Sporothrix schenckii: SPSK_06229
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Entry
SPSK_06229 CDS
T05555
Name
(RefSeq) peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
ssck
Sporothrix schenckii
Pathway
ssck03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPSK_06229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssck03019
]
SPSK_06229
03012 Translation factors [BR:
ssck03012
]
SPSK_06229
Messenger RNA biogenesis [BR:
ssck03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
SPSK_06229
Translation factors [BR:
ssck03012
]
Eukaryotic type
Release factors
SPSK_06229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
27668213
NCBI-ProteinID:
XP_016592549
UniProt:
A0A0F2MJJ0
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MSDPQSNEAEKNIEMWKVKKLIKRLEAARGNGTSMISLIIPPKDQVSRISKMLAEEYGTA
SNIKSRVNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTQEGKERKVNIDFEPFKP
INTSLYLCDNKFHTEALAELLESDQKFGFIIMDGNGALFGTLSGNTREIVHKFSVDLPKK
HGRGGQSALRFARLRDEKRHNYVRKVAELAVQNFITNDKVNVAGLILAGSADFKNDLNAS
DMFDNRLAVKVIKVVDVSYGGENGFNQAIELSSETLGNVKFIQEKKLIGKYFEEISQDTG
RVCYGIEDTLKALELGAVETLIVFENLEITRWVLKDSNGADIVLHTTKQQETGNREKFLD
KATGQEMEISSQESFLEWIAEHYKDFGTALEFVSDRSTEGNQFVKGFGGIGGLLRYKVNF
EQLAEVDDDDDYYDD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacccccagagcaatgaggccgagaagaacatcgagatgtggaaggtgaagaag
ctgatcaagcggctcgaagctgctcgcggcaacggaaccagcatgatctcgctgattatt
ccgcccaaggaccaggtctcgcgtatctccaagatgttggccgaagaatacggcaccgcc
tcgaacatcaagtcgcgtgtcaaccgccagtcggtgctgtccgccattacctcgacccag
cagcgcctcaagctttacaacaaggtcccgcccaatggtcttgtcgtgtactgtggtgaa
atcctgacccaggagggcaaggagcgcaaggtcaacattgactttgagcccttcaagccc
atcaacacctcgctgtatctctgcgacaacaagttccacaccgaggcccttgccgagctg
ctcgagtccgaccaaaagttcggcttcatcatcatggacggtaacggcgctctcttcggt
acgctcagcggcaacacgcgcgaaattgtgcacaagttctctgttgatctgcccaagaag
cacggtcgtggtggtcagtccgctctgcgtttcgctcgtctgcgtgacgaaaagcgccac
aactacgtccgcaaagtggccgagttggccgtgcagaacttcatcaccaacgacaaggtc
aacgtggccggcctcattctagctggttccgccgatttcaagaacgacctcaacgcttcc
gacatgttcgacaaccgtctggcggtcaaggtcatcaaggtcgtcgacgtgtcgtacggt
ggcgagaacggcttcaaccaggccattgagctgtcgtcggagacgctcggcaacgtcaag
ttcatccaggagaagaagctgatcggcaagtactttgaggagatcagccaggacaccggc
cgcgtttgctacggtatcgaggacacgctcaaggcactggagctcggtgccgtcgagacg
ctaattgtgttcgagaacctcgagatcacgcgctgggtgctgaaggacagcaacggtgcc
gacatcgtcctgcacacgaccaagcagcaggagactggcaaccgcgagaagttcctcgac
aaggcgaccggccaggagatggagatctcgtcgcaggagtcgttcctcgagtggatcgcc
gagcactacaaggactttggtaccgcgctggagtttgtgtcggatcgctcgaccgagggc
aaccagttcgtcaagggcttcggtggcattggcggtctcctgcgctacaaggtcaacttc
gagcagttggctgaagtggatgacgacgatgactactacgatgattga
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